BLASTX nr result

ID: Panax21_contig00016040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016040
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23029.3| unnamed protein product [Vitis vinifera]              166   7e-40
ref|XP_002276600.1| PREDICTED: importin subunit beta-1-like [Vit...   166   7e-40
ref|XP_002515853.1| importin beta-1, putative [Ricinus communis]...   156   5e-37
ref|XP_002318437.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-36
ref|XP_002526256.1| importin beta-1, putative [Ricinus communis]...   150   3e-35

>emb|CBI23029.3| unnamed protein product [Vitis vinifera]
          Length = 950

 Score =  166 bits (419), Expect(2) = 7e-40
 Identities = 83/95 (87%), Positives = 90/95 (94%)
 Frame = +2

Query: 2   GELSSDDKPVDSCKLAGLIFKNALDAKEQYKKFELVQRWLSLDVPVKFQIKTCLLQTLSS 181
           GEL++D+KPVDS KLAGLI KNALDAKEQ++KFELVQRWLSLD  VK QIKTCLLQTLSS
Sbjct: 123 GELANDEKPVDSRKLAGLILKNALDAKEQHRKFELVQRWLSLDAAVKTQIKTCLLQTLSS 182

Query: 182 PVPDARSTASQVIAKLAGIELPQKQWPELIGSLLA 286
           PVPDARSTASQVIAK+AGIELPQKQWPELIGSLL+
Sbjct: 183 PVPDARSTASQVIAKIAGIELPQKQWPELIGSLLS 217



 Score = 23.1 bits (48), Expect(2) = 7e-40
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 285 QVPVHVKQATL 317
           Q+P HVKQATL
Sbjct: 221 QLPAHVKQATL 231


>ref|XP_002276600.1| PREDICTED: importin subunit beta-1-like [Vitis vinifera]
          Length = 871

 Score =  166 bits (419), Expect(2) = 7e-40
 Identities = 83/95 (87%), Positives = 90/95 (94%)
 Frame = +2

Query: 2   GELSSDDKPVDSCKLAGLIFKNALDAKEQYKKFELVQRWLSLDVPVKFQIKTCLLQTLSS 181
           GEL++D+KPVDS KLAGLI KNALDAKEQ++KFELVQRWLSLD  VK QIKTCLLQTLSS
Sbjct: 44  GELANDEKPVDSRKLAGLILKNALDAKEQHRKFELVQRWLSLDAAVKTQIKTCLLQTLSS 103

Query: 182 PVPDARSTASQVIAKLAGIELPQKQWPELIGSLLA 286
           PVPDARSTASQVIAK+AGIELPQKQWPELIGSLL+
Sbjct: 104 PVPDARSTASQVIAKIAGIELPQKQWPELIGSLLS 138



 Score = 23.1 bits (48), Expect(2) = 7e-40
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 285 QVPVHVKQATL 317
           Q+P HVKQATL
Sbjct: 142 QLPAHVKQATL 152


>ref|XP_002515853.1| importin beta-1, putative [Ricinus communis]
           gi|223545008|gb|EEF46522.1| importin beta-1, putative
           [Ricinus communis]
          Length = 897

 Score =  156 bits (394), Expect(2) = 5e-37
 Identities = 79/95 (83%), Positives = 87/95 (91%)
 Frame = +2

Query: 2   GELSSDDKPVDSCKLAGLIFKNALDAKEQYKKFELVQRWLSLDVPVKFQIKTCLLQTLSS 181
           GEL++DDKPVDS KLAGLI KNALDAKEQ++K+ELVQRWLSLD   K QIKTCLL+TLSS
Sbjct: 44  GELANDDKPVDSRKLAGLILKNALDAKEQHRKYELVQRWLSLDAAAKSQIKTCLLKTLSS 103

Query: 182 PVPDARSTASQVIAKLAGIELPQKQWPELIGSLLA 286
            V DARSTASQVIAK+AGIELPQKQWPELIGSLL+
Sbjct: 104 LVSDARSTASQVIAKIAGIELPQKQWPELIGSLLS 138



 Score = 23.1 bits (48), Expect(2) = 5e-37
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 285 QVPVHVKQATL 317
           Q+P HVKQATL
Sbjct: 142 QLPAHVKQATL 152


>ref|XP_002318437.1| predicted protein [Populus trichocarpa] gi|222859110|gb|EEE96657.1|
           predicted protein [Populus trichocarpa]
          Length = 871

 Score =  154 bits (389), Expect(2) = 2e-36
 Identities = 77/95 (81%), Positives = 87/95 (91%)
 Frame = +2

Query: 2   GELSSDDKPVDSCKLAGLIFKNALDAKEQYKKFELVQRWLSLDVPVKFQIKTCLLQTLSS 181
           GEL++D+KPVDS KLAGLI KNALDAKEQ++K ELVQRWLSLD   K QIK CLL+TL+S
Sbjct: 44  GELANDEKPVDSRKLAGLILKNALDAKEQHRKLELVQRWLSLDNNAKGQIKACLLKTLAS 103

Query: 182 PVPDARSTASQVIAKLAGIELPQKQWPELIGSLLA 286
           PVPDARSTASQVIAK+AGIELPQ+QWPELIGSLL+
Sbjct: 104 PVPDARSTASQVIAKIAGIELPQRQWPELIGSLLS 138



 Score = 23.1 bits (48), Expect(2) = 2e-36
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 285 QVPVHVKQATL 317
           Q+P HVKQATL
Sbjct: 142 QLPAHVKQATL 152


>ref|XP_002526256.1| importin beta-1, putative [Ricinus communis]
           gi|223534421|gb|EEF36125.1| importin beta-1, putative
           [Ricinus communis]
          Length = 871

 Score =  150 bits (379), Expect(2) = 3e-35
 Identities = 77/95 (81%), Positives = 86/95 (90%)
 Frame = +2

Query: 2   GELSSDDKPVDSCKLAGLIFKNALDAKEQYKKFELVQRWLSLDVPVKFQIKTCLLQTLSS 181
           GEL++D+KPVDS KLAGLI KNALDAKEQ++K ELVQRWLSLD  VK QIK  LL+TLSS
Sbjct: 44  GELANDEKPVDSRKLAGLILKNALDAKEQHRKLELVQRWLSLDNNVKSQIKAFLLKTLSS 103

Query: 182 PVPDARSTASQVIAKLAGIELPQKQWPELIGSLLA 286
           P+ DARSTASQVIAK+AGIELPQKQWPELIGSLL+
Sbjct: 104 PIADARSTASQVIAKVAGIELPQKQWPELIGSLLS 138



 Score = 23.1 bits (48), Expect(2) = 3e-35
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 285 QVPVHVKQATL 317
           Q+P HVKQATL
Sbjct: 142 QLPAHVKQATL 152


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