BLASTX nr result

ID: Panax21_contig00016031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016031
         (1264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273133.1| PREDICTED: geranylgeranyl diphosphate reduct...   592   e-167
ref|XP_002328221.1| predicted protein [Populus trichocarpa] gi|2...   587   e-165
ref|XP_002521639.1| geranylgeranyl hydrogenase, putative [Ricinu...   584   e-164
ref|XP_003519480.1| PREDICTED: geranylgeranyl diphosphate reduct...   578   e-162
ref|XP_002312852.1| predicted protein [Populus trichocarpa] gi|2...   574   e-161

>ref|XP_002273133.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Vitis
            vinifera]
          Length = 466

 Score =  592 bits (1526), Expect = e-167
 Identities = 297/394 (75%), Positives = 337/394 (85%), Gaps = 3/394 (0%)
 Frame = -1

Query: 1174 HLKTRMSSATHPIHTLSFTLKRNLLTYSPKPVSKRSSLIIAGSK---ISGRKLRAAVIGG 1004
            HL +  SS+      L F++K N     P   SK SSLII+      +SGRKLRAAVIGG
Sbjct: 20   HLSSLFSSS------LPFSIKTN-----PFSTSKPSSLIISSISNPPLSGRKLRAAVIGG 68

Query: 1003 GPAGSSAAEVLASGGIETFLFERSPEGAKPCGGAIPLCMLDEFSIPVELVDRKVTHMKII 824
            GPAGSSAAE LA+GGIETFLFERSP  +KPCGGAIPLCML+EFSIP ELVDR+VT MKII
Sbjct: 69   GPAGSSAAETLAAGGIETFLFERSPASSKPCGGAIPLCMLEEFSIPPELVDRRVTRMKII 128

Query: 823  SPSNLTVDFGKTLKPHEFISMLRREVLDSFLRSRAESKGATVLKALVTNLEVPTSAGAPY 644
            SPSNLTVDFGKTLKP+E+I+MLRREVLDSFLR RAES GAT + ALVT+L++P+S  +PY
Sbjct: 129  SPSNLTVDFGKTLKPNEYIAMLRREVLDSFLRRRAESAGATAITALVTSLDLPSSPASPY 188

Query: 643  VVNYTTNNSRQSLAVDVVIGADGANSRVAKSIHAGNYACAIAFQERIRLPDHKMEYYQNL 464
            V++Y    SR SLAVDVVIGADGANSRVAKSI AG+Y+CAIAFQERI+LP+ KMEYYQ+L
Sbjct: 189  VIHYNAGGSRHSLAVDVVIGADGANSRVAKSIKAGDYSCAIAFQERIKLPEEKMEYYQDL 248

Query: 463  AEMYIGDDVSPDFYAWVFPKCDHVAVGTGTMCSKQNIKMFQQAIRSRVNPKIEGGHVIKV 284
            AEMY+G+DVSPDFYAWVFPKCDHVAVGTGT+CSKQNIK++Q+ IR RV PKI GG VIKV
Sbjct: 249  AEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCSKQNIKLYQRGIRERVEPKISGGKVIKV 308

Query: 283  EAHPIPEHPRPIRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVKASEGGERM 104
            EAHPIPEHPRP+R+RGRVALVGDAAGYVTKCSGEGIYFAAKSG+MC E I+KASEGG RM
Sbjct: 309  EAHPIPEHPRPVRIRGRVALVGDAAGYVTKCSGEGIYFAAKSGKMCAEAILKASEGGLRM 368

Query: 103  IGEEDLKREYLKEWDAKYINTFRFLDLLQKVFYG 2
            I EEDL+REYLKEWD KY+ T+R LDLL +VFYG
Sbjct: 369  ISEEDLRREYLKEWDGKYLVTYRLLDLLHRVFYG 402


>ref|XP_002328221.1| predicted protein [Populus trichocarpa]
            gi|224147708|ref|XP_002336528.1| predicted protein
            [Populus trichocarpa] gi|222835866|gb|EEE74287.1|
            predicted protein [Populus trichocarpa]
            gi|222837736|gb|EEE76101.1| predicted protein [Populus
            trichocarpa]
          Length = 451

 Score =  587 bits (1514), Expect = e-165
 Identities = 292/380 (76%), Positives = 326/380 (85%), Gaps = 2/380 (0%)
 Frame = -1

Query: 1135 HTLSFTLKRNLLTYSPKPVSKRSSLIIAGSKISGRKLRAAVIGGGPAGSSAAEVLASGGI 956
            H L F     L T  P    K  +L I  + ISGRKLRAAVIGGGPAGSSAAE LA+GG+
Sbjct: 8    HNLLFAPTPPLKTLKPHQKPKPHNLTITATSISGRKLRAAVIGGGPAGSSAAEALAAGGV 67

Query: 955  ETFLFERSPEGAKPCGGAIPLCMLDEFSIPVELVDRKVTHMKIISPSNLTVDFG-KTLKP 779
            ETFLFERSP  AKPCGGAIPLCM+DEFSIP+ LVDR VT MKIISPSNLTVDFG +TLK 
Sbjct: 68   ETFLFERSPSTAKPCGGAIPLCMIDEFSIPLHLVDRHVTRMKIISPSNLTVDFGSRTLKS 127

Query: 778  HEFISMLRREVLDSFLRSRAESKGATVLKALVTNLEVPTS-AGAPYVVNYTTNNSRQSLA 602
            HEFI MLRREVLDSFLRSRA+S GA  +  LVT++EVP   +  PYV+++T NN +QSLA
Sbjct: 128  HEFIPMLRREVLDSFLRSRAQSNGAHFITGLVTDIEVPDFFSSKPYVIHHTINNRKQSLA 187

Query: 601  VDVVIGADGANSRVAKSIHAGNYACAIAFQERIRLPDHKMEYYQNLAEMYIGDDVSPDFY 422
            VD+++GADGANSRVAK I AGNY+CAIAFQERI+LPD KMEYY +LAEMY+G+DVSPDFY
Sbjct: 188  VDLIVGADGANSRVAKIIDAGNYSCAIAFQERIKLPDEKMEYYHDLAEMYVGNDVSPDFY 247

Query: 421  AWVFPKCDHVAVGTGTMCSKQNIKMFQQAIRSRVNPKIEGGHVIKVEAHPIPEHPRPIRV 242
            AWVFPKCDHVAVGTGT+C++QNIK++Q+ IR RV  KI+GG VIKVEAHPIPEHPRP RV
Sbjct: 248  AWVFPKCDHVAVGTGTVCARQNIKVYQRGIRERVREKIKGGKVIKVEAHPIPEHPRPRRV 307

Query: 241  RGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVKASEGGERMIGEEDLKREYLKEW 62
            RGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGE IVKASEGGE+MI EEDLKREYL+EW
Sbjct: 308  RGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGEKMISEEDLKREYLREW 367

Query: 61   DAKYINTFRFLDLLQKVFYG 2
            D KY+NTFRFLDLLQKVFYG
Sbjct: 368  DRKYVNTFRFLDLLQKVFYG 387


>ref|XP_002521639.1| geranylgeranyl hydrogenase, putative [Ricinus communis]
            gi|223539151|gb|EEF40746.1| geranylgeranyl hydrogenase,
            putative [Ricinus communis]
          Length = 451

 Score =  584 bits (1505), Expect = e-164
 Identities = 291/380 (76%), Positives = 328/380 (86%), Gaps = 2/380 (0%)
 Frame = -1

Query: 1135 HTLSFTLKRNLLTYSPKPVSKRSSLIIAGSKISGRKLRAAVIGGGPAGSSAAEVLASGGI 956
            H L  T    L T + K    +   +   S ISGRKLRAAVIGGGPAGSSAAE LA+GGI
Sbjct: 8    HHLYSTFLCPLYTPTSKSTFFKPQTLSITSAISGRKLRAAVIGGGPAGSSAAEALAAGGI 67

Query: 955  ETFLFERSPEGAKPCGGAIPLCMLDEFSIPVELVDRKVTHMKIISPSNLTVDFG-KTLKP 779
            ETFLFERS   AKPCGGAIPLCMLDEF+IP+ L+DR VT MKI+SPSNLTVDFG KTLKP
Sbjct: 68   ETFLFERSTSTAKPCGGAIPLCMLDEFNIPLNLIDRHVTRMKIVSPSNLTVDFGSKTLKP 127

Query: 778  HEFISMLRREVLDSFLRSRAESKGATVLKALVTNLEVPTSAGAPYVVNYTTNNS-RQSLA 602
            HE I MLRREVLDSFLRSR +SKGAT+++ LV ++++P+    PY++++  NN+ +  LA
Sbjct: 128  HESIPMLRREVLDSFLRSRVQSKGATLIQGLVMHIDIPSLPKEPYIIHHIINNNIKGELA 187

Query: 601  VDVVIGADGANSRVAKSIHAGNYACAIAFQERIRLPDHKMEYYQNLAEMYIGDDVSPDFY 422
            VDVVIGADGANSRVAKSI+AGNY+CAIAFQERIRLPD KMEYY++LAEMY+GDDVSPDFY
Sbjct: 188  VDVVIGADGANSRVAKSINAGNYSCAIAFQERIRLPDDKMEYYKDLAEMYVGDDVSPDFY 247

Query: 421  AWVFPKCDHVAVGTGTMCSKQNIKMFQQAIRSRVNPKIEGGHVIKVEAHPIPEHPRPIRV 242
            AWVFPKCDHVAVGTGT+CSKQNIK+FQ+ IR RV  KI+GG VIKVEAHPIPEHPRP RV
Sbjct: 248  AWVFPKCDHVAVGTGTVCSKQNIKVFQRGIRERVRDKIKGGKVIKVEAHPIPEHPRPTRV 307

Query: 241  RGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVKASEGGERMIGEEDLKREYLKEW 62
            RGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVKASEGGE+M+ EEDLKREYL+EW
Sbjct: 308  RGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVKASEGGEKMVSEEDLKREYLREW 367

Query: 61   DAKYINTFRFLDLLQKVFYG 2
            D KY+NTFRFLDLLQ+VFYG
Sbjct: 368  DNKYVNTFRFLDLLQRVFYG 387


>ref|XP_003519480.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
            [Glycine max]
          Length = 448

 Score =  578 bits (1490), Expect = e-162
 Identities = 288/368 (78%), Positives = 321/368 (87%), Gaps = 2/368 (0%)
 Frame = -1

Query: 1099 TYSPKPVSKRSSLIIAGSKISGRKLRAAVIGGGPAGSSAAEVLASGGIETFLFERSPEG- 923
            T  PKP  K S  I A   ISGRKLRAAVIGGGPAGSSAAE LASGG+ETFLFER+P   
Sbjct: 18   TSKPKPYLK-SFTIKASKSISGRKLRAAVIGGGPAGSSAAEALASGGVETFLFERNPPSV 76

Query: 922  AKPCGGAIPLCMLDEFSIPVELVDRKVTHMKIISPSNLTVDFGKTLKPHEFISMLRREVL 743
            AKPCGGAIPLCML+EF IP  L+DR VTHM+I SPSN+ VDFGKTLKPHEFI+MLRREVL
Sbjct: 77   AKPCGGAIPLCMLEEFDIPNHLIDRHVTHMRIFSPSNIAVDFGKTLKPHEFIAMLRREVL 136

Query: 742  DSFLRSRAESKGATVLKALVTNLEVPTSAGAPYVVNYTTN-NSRQSLAVDVVIGADGANS 566
            DSFLRSRA + GAT +  LVT L++P S  APY V+YT N +SR+SLAVDVVIGADGANS
Sbjct: 137  DSFLRSRAHAAGATAISGLVTALDLPASPDAPYTVHYTANGSSRRSLAVDVVIGADGANS 196

Query: 565  RVAKSIHAGNYACAIAFQERIRLPDHKMEYYQNLAEMYIGDDVSPDFYAWVFPKCDHVAV 386
            RVAK+I AG+YACAIAFQERI+LPD KM YY+NLAEMY+GDDVSPDFYAWVFPKCDHVAV
Sbjct: 197  RVAKAIGAGDYACAIAFQERIKLPDEKMAYYENLAEMYVGDDVSPDFYAWVFPKCDHVAV 256

Query: 385  GTGTMCSKQNIKMFQQAIRSRVNPKIEGGHVIKVEAHPIPEHPRPIRVRGRVALVGDAAG 206
            GTGT+ SK++IK++Q+ IR RV PKI GG VIKVEAHPIPEHPRP+RVRGRVALVGDAAG
Sbjct: 257  GTGTVRSKKDIKLYQRGIRERVKPKINGGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAG 316

Query: 205  YVTKCSGEGIYFAAKSGRMCGEGIVKASEGGERMIGEEDLKREYLKEWDAKYINTFRFLD 26
            YVTKCSGEGIYFAAKSGR+CG G+V+ASEGG+RMI E DL+REYLK WDA+Y NTFRFLD
Sbjct: 317  YVTKCSGEGIYFAAKSGRVCGNGVVRASEGGDRMIDECDLRREYLKPWDAEYANTFRFLD 376

Query: 25   LLQKVFYG 2
            LLQ+VFYG
Sbjct: 377  LLQRVFYG 384


>ref|XP_002312852.1| predicted protein [Populus trichocarpa] gi|222849260|gb|EEE86807.1|
            predicted protein [Populus trichocarpa]
          Length = 454

 Score =  574 bits (1479), Expect = e-161
 Identities = 287/385 (74%), Positives = 328/385 (85%), Gaps = 3/385 (0%)
 Frame = -1

Query: 1147 THPIH-TLSFTLKRNLLTYSPKPVSKRSSLIIAGSKISGRKLRAAVIGGGPAGSSAAEVL 971
            TH +H T +  LK       PKP +   +   + S +SGRKLRAAVIGGGPAGSSAAE L
Sbjct: 7    THNLHFTPTLPLKAIKQHQQPKPKTLTITAT-SSSPLSGRKLRAAVIGGGPAGSSAAEAL 65

Query: 970  ASGGIETFLFERSPEGAKPCGGAIPLCMLDEFSIPVELVDRKVTHMKIISPSNLTVDFG- 794
            A+GG+ETFLFERSP  AKPCGGAIPLCM+DEFSIP+ L+DR VT MKIISPSNLTVDFG 
Sbjct: 66   AAGGVETFLFERSPSTAKPCGGAIPLCMIDEFSIPLHLIDRHVTRMKIISPSNLTVDFGS 125

Query: 793  KTLKPHEFISMLRREVLDSFLRSRAESKGATVLKALVTNLEVPTSAGA-PYVVNYTTNNS 617
            KTLK HEFI MLRREVLDSFLRSRA+S GA  +  LVT++EVP    + PYV+++T NN 
Sbjct: 126  KTLKSHEFIPMLRREVLDSFLRSRAQSNGAQFITGLVTDIEVPDFLSSKPYVIHHTINNC 185

Query: 616  RQSLAVDVVIGADGANSRVAKSIHAGNYACAIAFQERIRLPDHKMEYYQNLAEMYIGDDV 437
            ++SLAVD+++GADGANSRVAK I+AGNY CAIAFQERI+LPD KMEYY NLAEMY+G+DV
Sbjct: 186  KRSLAVDLIVGADGANSRVAKIINAGNYRCAIAFQERIKLPDEKMEYYHNLAEMYVGNDV 245

Query: 436  SPDFYAWVFPKCDHVAVGTGTMCSKQNIKMFQQAIRSRVNPKIEGGHVIKVEAHPIPEHP 257
            SPDFYAWVFPKCDHVAVGTGT C++++IK++Q+ IR RV  KI+GG VIKVEAHPIPE P
Sbjct: 246  SPDFYAWVFPKCDHVAVGTGTACARRDIKVYQRGIRERVKEKIKGGRVIKVEAHPIPEQP 305

Query: 256  RPIRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVKASEGGERMIGEEDLKRE 77
            RP RVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGE IVKASEGGERM+ EEDL+RE
Sbjct: 306  RPRRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGERMVSEEDLRRE 365

Query: 76   YLKEWDAKYINTFRFLDLLQKVFYG 2
            YL+EWD KY+NTFRFLDLLQ+VFYG
Sbjct: 366  YLREWDNKYVNTFRFLDLLQRVFYG 390


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