BLASTX nr result

ID: Panax21_contig00016029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016029
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273614.1| PREDICTED: uncharacterized protein LOC100257...   388   e-105
ref|XP_002314745.1| predicted protein [Populus trichocarpa] gi|2...   372   e-101
ref|XP_002521877.1| zinc finger protein, putative [Ricinus commu...   370   e-100
ref|XP_002268279.1| PREDICTED: uncharacterized protein LOC100251...   348   1e-93
ref|XP_002521878.1| nucleic acid binding protein, putative [Rici...   324   2e-86

>ref|XP_002273614.1| PREDICTED: uncharacterized protein LOC100257993 [Vitis vinifera]
          Length = 587

 Score =  388 bits (996), Expect = e-105
 Identities = 211/334 (63%), Positives = 234/334 (70%), Gaps = 17/334 (5%)
 Frame = -3

Query: 952  LPWKLKQKTNKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKYKCDKCSK 773
            LPWKL+QKT KEV+RKVYLCPEP+CVHHDPSRALGDLTGIKKHYSRKHGEKK+KCDKCSK
Sbjct: 95   LPWKLRQKTTKEVRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSK 154

Query: 772  RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPSGLSTIGS 593
            RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR+P  L+ +G 
Sbjct: 155  RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARNPPSLTNMGG 214

Query: 592  HLFGNNHMNLNLSQVSTQI--------PSNNMLRLGTAGAAKLEQLIPNSSNPSPLFTTX 437
            HL+G + M L LSQV +QI        PS+N+LRL +AGAAK E L+P  SNPS      
Sbjct: 215  HLYGTSQMTLGLSQVGSQIASLHDQNHPSSNILRLDSAGAAKYEHLLP-PSNPS-----F 268

Query: 436  XXXXXXXXXXXXXPDHSNQGFQEMQ-------NKPFHHHGLMQLPDLQSNTSNSPSCNTA 278
                            SNQG+QE Q       NKPF  HGLMQ PD Q N +NSPS   A
Sbjct: 269  GKPPQPMPSSAFYMPDSNQGYQEHQSHHTLLGNKPF--HGLMQFPDHQGNANNSPS--AA 324

Query: 277  ANLFNLGFYXXXXXXXXXXXXXXXXXXXXXXXXXSFLMPDHHQFNNGNGDGQGTNIFSG- 101
            ANLFNLGF+                          FL PD  QFNNGN  GQGT +FS  
Sbjct: 325  ANLFNLGFF-PNNSTSSSISNSNNANNSTTLPPSGFLSPD--QFNNGNASGQGTTLFSSS 381

Query: 100  -NDHVGSGLSSLYNTSHENQAAAPHMSATALLQK 2
             +DHVGSGLSSLY+TS + ++ APHMSATALLQK
Sbjct: 382  MSDHVGSGLSSLYSTSMQQESLAPHMSATALLQK 415


>ref|XP_002314745.1| predicted protein [Populus trichocarpa] gi|222863785|gb|EEF00916.1|
            predicted protein [Populus trichocarpa]
          Length = 530

 Score =  372 bits (954), Expect = e-101
 Identities = 203/328 (61%), Positives = 226/328 (68%), Gaps = 11/328 (3%)
 Frame = -3

Query: 952  LPWKLKQKTNKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKYKCDKCSK 773
            LPWKLKQKT KEVKRKVYLCPEP+CVHHDPSRALGDLTGIKKHY RKHGEKK+KC+KCSK
Sbjct: 78   LPWKLKQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYFRKHGEKKWKCEKCSK 137

Query: 772  RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPSGLSTIGS 593
            RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHP+ L+TIGS
Sbjct: 138  RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTSLNTIGS 197

Query: 592  HLFGNNHMNLNLSQVSTQI-------PS-NNMLRLGTAGAAKLEQLIPNSSNPSPLFTTX 437
            HL+GNNHM+L  SQV +QI       PS NNMLRLG+AGAA  E LIP  + PS      
Sbjct: 198  HLYGNNHMSLGFSQVGSQISHLQDHHPSGNNMLRLGSAGAANFEHLIPPPNPPS------ 251

Query: 436  XXXXXXXXXXXXXPDHSNQGFQEMQNKPFHHHGLMQLPDLQSNTSNSPSCNTAANLFNLG 257
                            +NQG     NK    HGLMQLPDLQSNT+N  S   A+NLFN G
Sbjct: 252  ---MPMMPPSGFFMGDANQG--PFPNKSL--HGLMQLPDLQSNTNNPSS---ASNLFNFG 301

Query: 256  FYXXXXXXXXXXXXXXXXXXXXXXXXXSFLMPDHHQFNNGNGDGQGTNIFSGN---DHVG 86
            F+                         S  + +  QFNN NG GQ T++F  N   DHVG
Sbjct: 302  FFSNNSNTGRTSNNDNANTGSTTTNLASPGLLNATQFNNVNGAGQRTSVFPTNMSGDHVG 361

Query: 85   SGLSSLYNTSHENQAAAPHMSATALLQK 2
            S +SS +NTS + +   PH+SATALLQK
Sbjct: 362  SAMSSFFNTSMQQENITPHVSATALLQK 389


>ref|XP_002521877.1| zinc finger protein, putative [Ricinus communis]
            gi|223538915|gb|EEF40513.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 571

 Score =  370 bits (949), Expect = e-100
 Identities = 203/329 (61%), Positives = 228/329 (69%), Gaps = 12/329 (3%)
 Frame = -3

Query: 952  LPWKLKQKTNKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKYKCDKCSK 773
            LPWKLKQKT KEVKRKVYLCPEP+CVHHD SRALGDLTGIKKHYSRKHGEKK+KC+KCSK
Sbjct: 104  LPWKLKQKTTKEVKRKVYLCPEPTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSK 163

Query: 772  RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPSGLSTIGS 593
            RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHP+GL+TIGS
Sbjct: 164  RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTGLNTIGS 223

Query: 592  HLFGNNHMNLNLSQVSTQI--------PSNNMLRLGTAGAAKLEQLIPNSSNPSPLFTTX 437
            HL+GNNHM+L LSQV + I         S+N+LRLG+AGAAK E +IP S++ S      
Sbjct: 224  HLYGNNHMSLGLSQVGSPISSLQDQNHSSSNLLRLGSAGAAKFEHIIPPSNSTS------ 277

Query: 436  XXXXXXXXXXXXXPDHSNQGFQEMQNKPFHHHGLMQLPDLQSNTSNSPSCNTAANLFNLG 257
                            +NQG     NKP   HGLMQLPDLQS T+NS   + A NLFNL 
Sbjct: 278  ---LPTMPASAFFMSDANQG--SFSNKPL--HGLMQLPDLQSATNNS---SVATNLFNLS 327

Query: 256  FY--XXXXXXXXXXXXXXXXXXXXXXXXXSFLMPDHHQFNNGNGDGQGTNIFSGN--DHV 89
            F+                            FL P  + FN GNG GQG+ IF+ N  D V
Sbjct: 328  FFSNNSPGNRISNSDNGNSSTAATNLVNSGFLSP--NPFNGGNG-GQGSTIFANNMGDPV 384

Query: 88   GSGLSSLYNTSHENQAAAPHMSATALLQK 2
            GSG+ SLY+ S + +   PHMSATALLQK
Sbjct: 385  GSGIPSLYSNSMQQENITPHMSATALLQK 413


>ref|XP_002268279.1| PREDICTED: uncharacterized protein LOC100251079 [Vitis vinifera]
          Length = 603

 Score =  348 bits (893), Expect = 1e-93
 Identities = 188/332 (56%), Positives = 218/332 (65%), Gaps = 15/332 (4%)
 Frame = -3

Query: 952  LPWKLKQKTNKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKYKCDKCSK 773
            LPWKLKQKT KEV+RKVYLCPEP CVHHDP+RALGDLTGIKKHYSRKHGEKK+KC+KCSK
Sbjct: 94   LPWKLKQKTTKEVRRKVYLCPEPGCVHHDPARALGDLTGIKKHYSRKHGEKKWKCEKCSK 153

Query: 772  RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPSGLSTIGS 593
            RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHP+ +STIGS
Sbjct: 154  RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTPMSTIGS 213

Query: 592  HLFGNNHMNLNLSQVSTQIPS--------NNMLRLGTAGAAKLEQLIP----NSSNPSPL 449
            HL+G+++M L LSQV  QI S         +MLRLG A A + + LIP    +SS  +P 
Sbjct: 214  HLYGSSNMGLGLSQVGPQISSMPDQSHQPGDMLRLGGARAGQFDHLIPPAIGSSSFRTPQ 273

Query: 448  FTTXXXXXXXXXXXXXXPDHSNQGFQEMQNKPFHHHGLMQLPDLQSNTSNSPSCNTAANL 269
                              D  +Q    + NKPF  HGL+ LPDLQ+NT+N  S   AANL
Sbjct: 274  PMPSQAFYIPEPNQEFHEDQQSQHGGLLTNKPF--HGLVHLPDLQNNTNNPSS---AANL 328

Query: 268  FNLGFYXXXXXXXXXXXXXXXXXXXXXXXXXSFLMPDHHQFNNGNGDGQGTNIFSGN--- 98
            FNL F+                           L+ D     NG    +  N+F  N   
Sbjct: 329  FNLSFFSNSSNTNSMLSNTNNANNSTNMPSSGLLISDQFNTVNGGSGSERNNLFPSNIIG 388

Query: 97   DHVGSGLSSLYNTSHENQAAAPHMSATALLQK 2
            D + SG+ SL++TS +N+ A  HMSATALLQK
Sbjct: 389  DQISSGVPSLFSTSLQNENAVSHMSATALLQK 420


>ref|XP_002521878.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223538916|gb|EEF40514.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 589

 Score =  324 bits (831), Expect = 2e-86
 Identities = 184/336 (54%), Positives = 219/336 (65%), Gaps = 19/336 (5%)
 Frame = -3

Query: 952  LPWKLKQKTNKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKYKCDKCSK 773
            LPWKLKQKT KEVKRKVYLCPEP+CVHHDPSRALGDLTGIKKHYSRKHGEKK+KC+KCSK
Sbjct: 96   LPWKLKQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSK 155

Query: 772  RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARH-PSGLSTIG 596
            RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESAR+ P+ L+TIG
Sbjct: 156  RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARNPPTNLNTIG 215

Query: 595  SHLFGNNHMNLNLSQVSTQI-----PSNNMLRLGTAG-AAKLEQLIPNSS------NPSP 452
            SHL+G ++M+L LSQV+TQI      S+++LRLG      + + L+P+S        PSP
Sbjct: 216  SHLYGGSNMSLGLSQVNTQISSMQDQSSDILRLGGGSRTGQFDHLLPSSMGGSVSFRPSP 275

Query: 451  LFTTXXXXXXXXXXXXXXPDHSNQGFQEMQNKPFHHHGLMQLPDLQSNTSNSPSCNTAAN 272
                               D        +QNKPF HHGLMQ  +L + T+ +P    A+N
Sbjct: 276  PQPMPSPAFFMQEPNQNYHDEHQAQQGLLQNKPF-HHGLMQFAELHNTTNTNP---PASN 331

Query: 271  LFNLGFYXXXXXXXXXXXXXXXXXXXXXXXXXSFLMPDHHQFNNG-NGDGQGTNIFSGN- 98
            +FNL F                          S LM +     NG +G G G+ +FS + 
Sbjct: 332  IFNLSF-----LSNSSTTSSITNSNNANNSNNSLLMSNQFSNQNGASGGGDGSTMFSNHI 386

Query: 97   --DH--VGSGLSSLYNTSHENQAAAPHMSATALLQK 2
              DH  + SG+ SL+ +S +     PHMSATALLQK
Sbjct: 387  MGDHHQMNSGVPSLFTSSVQKDNTVPHMSATALLQK 422


Top