BLASTX nr result

ID: Panax21_contig00016026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016026
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD...   316   7e-84
emb|CBI17339.3| unnamed protein product [Vitis vinifera]              316   7e-84
ref|XP_002529638.1| cell cycle checkpoint protein rad17, putativ...   293   5e-77
ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|2...   291   1e-76
emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera]   280   5e-73

>ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis vinifera]
          Length = 1013

 Score =  316 bits (809), Expect = 7e-84
 Identities = 173/294 (58%), Positives = 207/294 (70%), Gaps = 10/294 (3%)
 Frame = +1

Query: 1    RICREEHRTVTAEQIDLIAKASGGDIRHAITSLQYFCLKPNPMLSLSISNGTPTYPEESC 180
            +ICR+E   VTA+QIDLIA++SGGD+RHAITSLQYFCLKP+PMLSLS S    TY +E  
Sbjct: 300  KICRQEQCGVTADQIDLIARSSGGDVRHAITSLQYFCLKPDPMLSLSFSEPARTYSKEKS 359

Query: 181  T----LNYGISLPFGRDETLSLFHALGKFLHNKRETKNSIASDKDAFCLRERFIRSSFKM 348
                 L+ G SLPFGRDETLSLFHALGKFLHNKRE++N+IA  ++AF +RER  R   KM
Sbjct: 360  DELNPLDDGFSLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLVRERLTRLPLKM 419

Query: 349  EAPEKVLCQAHGQARTITDFLHENVLDFLSEEAIDDAWTVSSYLSDADTLLAFR------ 510
            +APE+VLCQAH QAR + DFLHENVLDFLSEEAIDDA  V+SYLSD+D LLA        
Sbjct: 420  DAPERVLCQAHVQARPVVDFLHENVLDFLSEEAIDDASAVASYLSDSDFLLAAHRGMLAT 479

Query: 511  NYEATNXXXXXXXXXXXRGVLFGNSHPLSSRWHAVRRPKIWQVEQSLRRIKREMVSQRSD 690
            +YEA N           RGVLFGNSHPL+SRWHA+RRPK+WQVEQS    K E++ QR  
Sbjct: 480  SYEAGNVLQSAAASVAARGVLFGNSHPLASRWHAIRRPKLWQVEQSSLHNKCEILGQR-- 537

Query: 691  VYNGLNFSDLSVIATKWKPTLNWLGFRASEDLEATHHHTSMNGNVVEDDRYDPM 852
                L+ S++SVIAT++ P   WL + AS   E   +   + GN  E D  D M
Sbjct: 538  -LVALSTSNVSVIATEYIPIFKWLRYGASGGFE--DYQALIQGNETELDDNDSM 588


>emb|CBI17339.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  316 bits (809), Expect = 7e-84
 Identities = 173/294 (58%), Positives = 207/294 (70%), Gaps = 10/294 (3%)
 Frame = +1

Query: 1    RICREEHRTVTAEQIDLIAKASGGDIRHAITSLQYFCLKPNPMLSLSISNGTPTYPEESC 180
            +ICR+E   VTA+QIDLIA++SGGD+RHAITSLQYFCLKP+PMLSLS S    TY +E  
Sbjct: 300  KICRQEQCGVTADQIDLIARSSGGDVRHAITSLQYFCLKPDPMLSLSFSEPARTYSKEKS 359

Query: 181  T----LNYGISLPFGRDETLSLFHALGKFLHNKRETKNSIASDKDAFCLRERFIRSSFKM 348
                 L+ G SLPFGRDETLSLFHALGKFLHNKRE++N+IA  ++AF +RER  R   KM
Sbjct: 360  DELNPLDDGFSLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLVRERLTRLPLKM 419

Query: 349  EAPEKVLCQAHGQARTITDFLHENVLDFLSEEAIDDAWTVSSYLSDADTLLAFR------ 510
            +APE+VLCQAH QAR + DFLHENVLDFLSEEAIDDA  V+SYLSD+D LLA        
Sbjct: 420  DAPERVLCQAHVQARPVVDFLHENVLDFLSEEAIDDASAVASYLSDSDFLLAAHRGMLAT 479

Query: 511  NYEATNXXXXXXXXXXXRGVLFGNSHPLSSRWHAVRRPKIWQVEQSLRRIKREMVSQRSD 690
            +YEA N           RGVLFGNSHPL+SRWHA+RRPK+WQVEQS    K E++ QR  
Sbjct: 480  SYEAGNVLQSAAASVAARGVLFGNSHPLASRWHAIRRPKLWQVEQSSLHNKCEILGQR-- 537

Query: 691  VYNGLNFSDLSVIATKWKPTLNWLGFRASEDLEATHHHTSMNGNVVEDDRYDPM 852
                L+ S++SVIAT++ P   WL + AS   E   +   + GN  E D  D M
Sbjct: 538  -LVALSTSNVSVIATEYIPIFKWLRYGASGGFE--DYQALIQGNETELDDNDSM 588


>ref|XP_002529638.1| cell cycle checkpoint protein rad17, putative [Ricinus communis]
            gi|223530864|gb|EEF32725.1| cell cycle checkpoint protein
            rad17, putative [Ricinus communis]
          Length = 439

 Score =  293 bits (750), Expect = 5e-77
 Identities = 164/296 (55%), Positives = 202/296 (68%), Gaps = 11/296 (3%)
 Frame = +1

Query: 1    RICREEHRTVTAEQIDLIAKASGGDIRHAITSLQYFCLKPNPMLSLS-ISNGTPTYPE-- 171
            RIC+++   VTAEQI+LIAKASGGDIRHAITSLQ F +KP+ MLSLS +S  TP+Y +  
Sbjct: 132  RICKQKQHNVTAEQIELIAKASGGDIRHAITSLQLFSVKPDIMLSLSSLSTLTPSYSDGR 191

Query: 172  --ESCTLNYGISLPFGRDETLSLFHALGKFLHNKRETKNSIASDKDAFCLRERFIRSSFK 345
              E   L  G SL FGRDETLSLFHALGKFLHNKRET+     D+DAF +R++F R   K
Sbjct: 192  ADEINALTSGFSLLFGRDETLSLFHALGKFLHNKRETEAPSVFDQDAFLVRDKFSRLPLK 251

Query: 346  MEAPEKVLCQAHGQARTITDFLHENVLDFLSEEAIDDAWTVSSYLSDADTLLA------F 507
            M+APEK+LCQAHGQAR I DFLHENVLDF+S++A+D    V+SYLSDAD LL+       
Sbjct: 252  MDAPEKILCQAHGQARPIADFLHENVLDFISDDAMDATGNVASYLSDADLLLSSFRGMLV 311

Query: 508  RNYEATNXXXXXXXXXXXRGVLFGNSHPLSSRWHAVRRPKIWQVEQSLRRIKREMVSQRS 687
            R  EA +           RGVLFGNSHP  SRWHA+RRPK+WQ  QS+ R ++ M+SQR 
Sbjct: 312  RCNEAESVLQSAAASVAVRGVLFGNSHPSPSRWHAIRRPKLWQAGQSMLRNQKAMLSQRL 371

Query: 688  DVYNGLNFSDLSVIATKWKPTLNWLGFRASEDLEATHHHTSMNGNVVEDDRYDPMS 855
                G +FS+++ I T++ P L WLG RA   +EA  H    + N   DD  + MS
Sbjct: 372  IANGGSSFSNVAEIVTEYVPVLKWLGHRA-PGVEA--HQVFEHHNEAYDDSSERMS 424


>ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|222836733|gb|EEE75126.1|
            predicted protein [Populus trichocarpa]
          Length = 613

 Score =  291 bits (746), Expect = 1e-76
 Identities = 160/275 (58%), Positives = 196/275 (71%), Gaps = 11/275 (4%)
 Frame = +1

Query: 1    RICREEHRTVTAEQIDLIAKASGGDIRHAITSLQYFCLKPNPMLSLSISNGTPTYPEESC 180
            RICR+E  +VT EQ+DLIAK SGGDIRHAITSLQ FC+KP+ +L+ S S  +  Y +E  
Sbjct: 307  RICRQEQCSVTDEQLDLIAKGSGGDIRHAITSLQLFCVKPDLVLNGSYSTPSYLYGKEDD 366

Query: 181  --TLNYGISLPFGRDETLSLFHALGKFLHNKRETKNSIA-SDKDAFCLRERFIRSSFKME 351
               L  GISL FGRDETLSLFHALGKFLHNKRET+ + A +  DAF ++E F R   KM+
Sbjct: 367  IDALVSGISLLFGRDETLSLFHALGKFLHNKRETEVANAITPGDAFLVQENFSRLPLKMD 426

Query: 352  APEKVLCQAHGQARTITDFLHENVLDFLSEEAIDDAWTVSSYLSDADTLLA------FRN 513
            APEKVLCQAHGQAR +TDFLHENVLDF+S+EA+DDAW VSSY SD+D LL+       R 
Sbjct: 427  APEKVLCQAHGQARPVTDFLHENVLDFISDEAMDDAWHVSSYFSDSDLLLSSFRGMLARY 486

Query: 514  YEATNXXXXXXXXXXXRGVLFGNSHPLSSRWHAVRRPKIWQVEQSLRRIKREMVSQRSDV 693
             EA N           RGVLFGNSHP   RWHA+R+PK+WQVE+S+   ++E+V QR   
Sbjct: 487  NEAENVLQSAAASVAVRGVLFGNSHPSPPRWHAIRKPKLWQVEKSMLHNQKEIVRQRFIA 546

Query: 694  YNGLNFSDLSVIATKWKPTLNWLGFRAS--EDLEA 792
            YNG +  ++S +AT++ P L WL  RAS  ED +A
Sbjct: 547  YNGSSSCNVSDVATEYMPLLKWLEHRASGFEDNQA 581


>emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera]
          Length = 1125

 Score =  280 bits (715), Expect = 5e-73
 Identities = 163/298 (54%), Positives = 197/298 (66%), Gaps = 14/298 (4%)
 Frame = +1

Query: 1    RICREEHRTVTAEQIDLIAKASGGDIRHAITSLQYFCLKPNPMLSLSISNGTPTYPEESC 180
            +ICR+E   VTA+QIDLIA++SGGDIRHAITSLQYFCLKP+PMLSLS S    TY +E  
Sbjct: 381  KICRQEQCGVTADQIDLIARSSGGDIRHAITSLQYFCLKPDPMLSLSFSEPARTYSKEKX 440

Query: 181  ----TLNYGISLPFGRDETLSLFHALGKFLHNKRETKNSIASDKDAFCLRERFIR-SSFK 345
                 L+ G SLPFGRDETLSLFHALGKFLHNKRE++N+IA  ++AF +RER  +    K
Sbjct: 441  DELNPLDDGFSLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLVRERLDKIIPLK 500

Query: 346  MEA---PEKVLCQAHGQARTITDFLHENVLDFLSEEAIDDAWTVSSYLSDADTLLAFR-- 510
            M      +    + H QAR + DFLHENVLDFLSEEAIDDA  V+SYLSD+D LLA    
Sbjct: 501  MTVLMLQKGFFVKQHVQARPVVDFLHENVLDFLSEEAIDDASAVASYLSDSDFLLAAHRG 560

Query: 511  ----NYEATNXXXXXXXXXXXRGVLFGNSHPLSSRWHAVRRPKIWQVEQSLRRIKREMVS 678
                +YEA N           RGVLF NSHPL+SRWHA+RRPK+WQVEQS    K E++ 
Sbjct: 561  MLATSYEAGNVLQSAAASVAARGVLFANSHPLASRWHAIRRPKLWQVEQSSLHNKCEILG 620

Query: 679  QRSDVYNGLNFSDLSVIATKWKPTLNWLGFRASEDLEATHHHTSMNGNVVEDDRYDPM 852
            QR      L+ S++SVIAT++ P   WL + AS   E   +   + GN  E    D M
Sbjct: 621  QR---LVALSTSNVSVIATEYIPMFKWLRYGASGGFE--DYQALIQGNETELXDNDSM 673


Top