BLASTX nr result

ID: Panax21_contig00016016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016016
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531492.1| ATP synthase f1, gamma subunit, putative [Ri...   283   3e-74
sp|P26360.2|ATPG3_IPOBA RecName: Full=ATP synthase subunit gamma...   280   1e-73
ref|XP_002284053.1| PREDICTED: ATP synthase subunit gamma, mitoc...   280   3e-73
emb|CAN80676.1| hypothetical protein VITISV_026034 [Vitis vinifera]   280   3e-73
ref|XP_004137430.1| PREDICTED: ATP synthase subunit gamma, mitoc...   279   4e-73

>ref|XP_002531492.1| ATP synthase f1, gamma subunit, putative [Ricinus communis]
           gi|223528879|gb|EEF30879.1| ATP synthase f1, gamma
           subunit, putative [Ricinus communis]
          Length = 326

 Score =  283 bits (723), Expect = 3e-74
 Identities = 154/180 (85%), Positives = 161/180 (89%), Gaps = 4/180 (2%)
 Frame = +2

Query: 167 MAMAALRREGRRFA---VSPNPIYA-LRSSLLTPPEEQVSLGVRSISTQIVRNRMKSIKN 334
           MAMAALRREGRRFA   +S  PI A +RSSLL   EEQ   GVRSISTQ+VRNRMKSIKN
Sbjct: 1   MAMAALRREGRRFASPLISHQPITAAVRSSLLAAAEEQAPFGVRSISTQVVRNRMKSIKN 60

Query: 335 IQKITKAMKMVAASKLRAIQSRTENSRGLWQPFTALLGDAPSVDVKKNVIVTISSDKGLC 514
           IQKITKAMKMVAASKLRAIQ+R ENSRGLWQPFTALLGDAPSVDVKKNVIVTISSDKGLC
Sbjct: 61  IQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDAPSVDVKKNVIVTISSDKGLC 120

Query: 515 GGINSTSVKISKALHKLNSGPDKESKYVILGEKAKAQLIRDSKKHIELSITELQKNFLNY 694
           GGINSTSVK S+ALHKL SGP+KE+KYVILGEKAKAQLIRDSKK IEL ITELQKN LNY
Sbjct: 121 GGINSTSVKTSRALHKLTSGPEKETKYVILGEKAKAQLIRDSKKDIELCITELQKNPLNY 180


>sp|P26360.2|ATPG3_IPOBA RecName: Full=ATP synthase subunit gamma, mitochondrial; AltName:
           Full=F-ATPase gamma subunit; Flags: Precursor
           gi|303626|dbj|BAA03526.1| F1-ATPase gammma subunit
           [Ipomoea batatas]
          Length = 326

 Score =  280 bits (717), Expect = 1e-73
 Identities = 148/180 (82%), Positives = 160/180 (88%), Gaps = 4/180 (2%)
 Frame = +2

Query: 167 MAMAALRREGRRFAV----SPNPIYALRSSLLTPPEEQVSLGVRSISTQIVRNRMKSIKN 334
           MAMAALRREGRR A     SP P+ ALRSSL++P EE    GVRSISTQ+VRNRMKS+KN
Sbjct: 1   MAMAALRREGRRLAAAPFTSPTPLNALRSSLVSPSEEIGLSGVRSISTQVVRNRMKSVKN 60

Query: 335 IQKITKAMKMVAASKLRAIQSRTENSRGLWQPFTALLGDAPSVDVKKNVIVTISSDKGLC 514
           IQKITKAMKMVAASKLRAIQ+R ENSRGLWQPFTALLGD PSVDVKKNVI+TISSDKGLC
Sbjct: 61  IQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPSVDVKKNVIITISSDKGLC 120

Query: 515 GGINSTSVKISKALHKLNSGPDKESKYVILGEKAKAQLIRDSKKHIELSITELQKNFLNY 694
           GGINSTSVK S+ +HKLNSGP+KE+KYVILGEKAKAQL+RDSKK IEL ITELQKN LNY
Sbjct: 121 GGINSTSVKTSRNIHKLNSGPEKENKYVILGEKAKAQLVRDSKKDIELIITELQKNPLNY 180


>ref|XP_002284053.1| PREDICTED: ATP synthase subunit gamma, mitochondrial [Vitis
           vinifera] gi|297733875|emb|CBI15122.3| unnamed protein
           product [Vitis vinifera]
          Length = 322

 Score =  280 bits (715), Expect = 3e-73
 Identities = 149/178 (83%), Positives = 160/178 (89%), Gaps = 2/178 (1%)
 Frame = +2

Query: 167 MAMAALRREGRRFA--VSPNPIYALRSSLLTPPEEQVSLGVRSISTQIVRNRMKSIKNIQ 340
           MAMAA RREGRRFA  ++P PI A+RSS +  PEEQ  LGVRSISTQIVRNRMKS+KNIQ
Sbjct: 1   MAMAAFRREGRRFAPLITPRPIAAVRSSPI--PEEQAPLGVRSISTQIVRNRMKSVKNIQ 58

Query: 341 KITKAMKMVAASKLRAIQSRTENSRGLWQPFTALLGDAPSVDVKKNVIVTISSDKGLCGG 520
           KITKAMKMVAASKLRAIQ+R ENSRGLWQPFT LLGD+PSVDVKKNVIVTISSDKGLCGG
Sbjct: 59  KITKAMKMVAASKLRAIQTRAENSRGLWQPFTVLLGDSPSVDVKKNVIVTISSDKGLCGG 118

Query: 521 INSTSVKISKALHKLNSGPDKESKYVILGEKAKAQLIRDSKKHIELSITELQKNFLNY 694
           INSTSVKISKALHK  SGP+K +KYV+LGEKAKAQL+RDSKK IEL ITELQKN LNY
Sbjct: 119 INSTSVKISKALHKFTSGPEKGTKYVVLGEKAKAQLMRDSKKDIELCITELQKNPLNY 176


>emb|CAN80676.1| hypothetical protein VITISV_026034 [Vitis vinifera]
          Length = 181

 Score =  280 bits (715), Expect = 3e-73
 Identities = 149/178 (83%), Positives = 160/178 (89%), Gaps = 2/178 (1%)
 Frame = +2

Query: 167 MAMAALRREGRRFA--VSPNPIYALRSSLLTPPEEQVSLGVRSISTQIVRNRMKSIKNIQ 340
           MAMAA RREGRRFA  ++P PI A+RSS +  PEEQ  LGVRSISTQIVRNRMKS+KNIQ
Sbjct: 1   MAMAAFRREGRRFAPLITPRPIAAVRSSPI--PEEQAPLGVRSISTQIVRNRMKSVKNIQ 58

Query: 341 KITKAMKMVAASKLRAIQSRTENSRGLWQPFTALLGDAPSVDVKKNVIVTISSDKGLCGG 520
           KITKAMKMVAASKLRAIQ+R ENSRGLWQPFT LLGD+PSVDVKKNVIVTISSDKGLCGG
Sbjct: 59  KITKAMKMVAASKLRAIQTRAENSRGLWQPFTVLLGDSPSVDVKKNVIVTISSDKGLCGG 118

Query: 521 INSTSVKISKALHKLNSGPDKESKYVILGEKAKAQLIRDSKKHIELSITELQKNFLNY 694
           INSTSVKISKALHK  SGP+K +KYV+LGEKAKAQL+RDSKK IEL ITELQKN LNY
Sbjct: 119 INSTSVKISKALHKFTSGPEKGTKYVVLGEKAKAQLMRDSKKDIELCITELQKNPLNY 176


>ref|XP_004137430.1| PREDICTED: ATP synthase subunit gamma, mitochondrial-like [Cucumis
           sativus] gi|449519214|ref|XP_004166630.1| PREDICTED: ATP
           synthase subunit gamma, mitochondrial-like [Cucumis
           sativus]
          Length = 322

 Score =  279 bits (713), Expect = 4e-73
 Identities = 149/178 (83%), Positives = 160/178 (89%), Gaps = 2/178 (1%)
 Frame = +2

Query: 167 MAMAALRREGRRFA--VSPNPIYALRSSLLTPPEEQVSLGVRSISTQIVRNRMKSIKNIQ 340
           MAMAALRREGRR A  +SP PI ALRSSLL   EEQ  LGVRSISTQ+VR RMKS+KNIQ
Sbjct: 1   MAMAALRREGRRLATVISPQPITALRSSLLY--EEQAPLGVRSISTQVVRTRMKSVKNIQ 58

Query: 341 KITKAMKMVAASKLRAIQSRTENSRGLWQPFTALLGDAPSVDVKKNVIVTISSDKGLCGG 520
           KITKAMKMVAASKLRAIQ RTENSRGLWQPFTALLGD PSVDVKKNVIVT+SSDKGLCGG
Sbjct: 59  KITKAMKMVAASKLRAIQVRTENSRGLWQPFTALLGDNPSVDVKKNVIVTVSSDKGLCGG 118

Query: 521 INSTSVKISKALHKLNSGPDKESKYVILGEKAKAQLIRDSKKHIELSITELQKNFLNY 694
           INSTSVKIS+AL K+NSGP+KE+KYV+LGEKAKAQL+RDSKK IE+  TELQKN LNY
Sbjct: 119 INSTSVKISRALRKINSGPEKETKYVVLGEKAKAQLVRDSKKDIEIIFTELQKNPLNY 176


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