BLASTX nr result

ID: Panax21_contig00016008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016008
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275951.1| PREDICTED: RING finger and transmembrane dom...   360   1e-97
emb|CBI15794.3| unnamed protein product [Vitis vinifera]              360   1e-97
ref|XP_004142726.1| PREDICTED: RING finger and transmembrane dom...   351   8e-95
ref|XP_002323102.1| predicted protein [Populus trichocarpa] gi|2...   350   2e-94
ref|XP_003552333.1| PREDICTED: RING finger and transmembrane dom...   349   2e-94

>ref|XP_002275951.1| PREDICTED: RING finger and transmembrane domain-containing protein
           2-like [Vitis vinifera]
          Length = 447

 Score =  360 bits (925), Expect = 1e-97
 Identities = 172/216 (79%), Positives = 189/216 (87%)
 Frame = +3

Query: 3   LFKSNDILRKQTALKGERKISVLICFTVIFMLHVICVYWWYQDADLIYXXXXXXXXXXXX 182
           +FKSNDILRKQTALKGERK+SVL   T +FMLHVICVYWWY++ DL+Y            
Sbjct: 197 MFKSNDILRKQTALKGERKLSVLTGITAVFMLHVICVYWWYRNNDLLYPLVLLPPKAIPP 256

Query: 183 FWHAIFVIMVNDTMVRQAAMVFKCILLMYYKNSGGHNYRRQGQMLTLIEYMLLLYRALLP 362
           FWHAIF+IMVNDTMVRQAAM  KCILLMYYKNS G +YR+QGQMLTL+EY+LLLYRALLP
Sbjct: 257 FWHAIFIIMVNDTMVRQAAMALKCILLMYYKNSRGRDYRKQGQMLTLVEYLLLLYRALLP 316

Query: 363 TPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSIVQKVQLLFSALRALSCKEIQYGSYATS 542
           TPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTS+V+KVQ  F+ALRALS KE+ YGSYATS
Sbjct: 317 TPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGSYATS 376

Query: 543 EQINAAGDLCAICQEKMQAPILLSCKHIFCEDCVAE 650
           EQ+NAAGDLCAICQEKM APILL CKHIFCEDCV+E
Sbjct: 377 EQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSE 412


>emb|CBI15794.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score =  360 bits (925), Expect = 1e-97
 Identities = 172/216 (79%), Positives = 189/216 (87%)
 Frame = +3

Query: 3   LFKSNDILRKQTALKGERKISVLICFTVIFMLHVICVYWWYQDADLIYXXXXXXXXXXXX 182
           +FKSNDILRKQTALKGERK+SVL   T +FMLHVICVYWWY++ DL+Y            
Sbjct: 167 MFKSNDILRKQTALKGERKLSVLTGITAVFMLHVICVYWWYRNNDLLYPLVLLPPKAIPP 226

Query: 183 FWHAIFVIMVNDTMVRQAAMVFKCILLMYYKNSGGHNYRRQGQMLTLIEYMLLLYRALLP 362
           FWHAIF+IMVNDTMVRQAAM  KCILLMYYKNS G +YR+QGQMLTL+EY+LLLYRALLP
Sbjct: 227 FWHAIFIIMVNDTMVRQAAMALKCILLMYYKNSRGRDYRKQGQMLTLVEYLLLLYRALLP 286

Query: 363 TPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSIVQKVQLLFSALRALSCKEIQYGSYATS 542
           TPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTS+V+KVQ  F+ALRALS KE+ YGSYATS
Sbjct: 287 TPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGSYATS 346

Query: 543 EQINAAGDLCAICQEKMQAPILLSCKHIFCEDCVAE 650
           EQ+NAAGDLCAICQEKM APILL CKHIFCEDCV+E
Sbjct: 347 EQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSE 382


>ref|XP_004142726.1| PREDICTED: RING finger and transmembrane domain-containing protein
           2-like [Cucumis sativus]
           gi|449502691|ref|XP_004161715.1| PREDICTED: RING finger
           and transmembrane domain-containing protein 2-like
           [Cucumis sativus]
          Length = 471

 Score =  351 bits (900), Expect = 8e-95
 Identities = 165/216 (76%), Positives = 188/216 (87%)
 Frame = +3

Query: 3   LFKSNDILRKQTALKGERKISVLICFTVIFMLHVICVYWWYQDADLIYXXXXXXXXXXXX 182
           ++KSNDILRKQTALKGERKISVL+C ++ F +HVI VYWWYQ+ DL+Y            
Sbjct: 221 MYKSNDILRKQTALKGERKISVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPP 280

Query: 183 FWHAIFVIMVNDTMVRQAAMVFKCILLMYYKNSGGHNYRRQGQMLTLIEYMLLLYRALLP 362
           FWHAIF+IMVNDT+VRQA MV KC+LLMYYKNS G NYR+QGQMLTL+EY+LLLYRALLP
Sbjct: 281 FWHAIFIIMVNDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLP 340

Query: 363 TPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSIVQKVQLLFSALRALSCKEIQYGSYATS 542
           TPVWYRFFLNKEYGSLFSSL TGLYLTFKLTS+V+KVQ  F+AL+ALS KE+ YG+YATS
Sbjct: 341 TPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATS 400

Query: 543 EQINAAGDLCAICQEKMQAPILLSCKHIFCEDCVAE 650
           EQ++AAGDLCAICQEKM APILL CKHIFCEDCV+E
Sbjct: 401 EQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSE 436


>ref|XP_002323102.1| predicted protein [Populus trichocarpa] gi|222867732|gb|EEF04863.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  350 bits (897), Expect = 2e-94
 Identities = 165/216 (76%), Positives = 187/216 (86%)
 Frame = +3

Query: 3   LFKSNDILRKQTALKGERKISVLICFTVIFMLHVICVYWWYQDADLIYXXXXXXXXXXXX 182
           +FKSNDILRKQTALKGERKISVL+  ++ FM+HV+ VYWWYQ+ DL+Y            
Sbjct: 194 MFKSNDILRKQTALKGERKISVLVGISLAFMVHVVAVYWWYQNDDLLYPLIMLPPKSIPP 253

Query: 183 FWHAIFVIMVNDTMVRQAAMVFKCILLMYYKNSGGHNYRRQGQMLTLIEYMLLLYRALLP 362
           FWHAIF+IMVNDT+VRQAAM FKC+LL+YYKNS G NYRRQGQMLTL+EY++LLYRALLP
Sbjct: 254 FWHAIFIIMVNDTLVRQAAMAFKCVLLIYYKNSRGRNYRRQGQMLTLVEYLILLYRALLP 313

Query: 363 TPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSIVQKVQLLFSALRALSCKEIQYGSYATS 542
            PVWYRFFLNKEYGSLFSSL TGLYLTFKLTS V+KVQ  FSAL+ALS KE+ YG++ATS
Sbjct: 314 APVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSFVEKVQSFFSALKALSRKEVHYGAHATS 373

Query: 543 EQINAAGDLCAICQEKMQAPILLSCKHIFCEDCVAE 650
           EQ+NAAGDLCAICQEKM APILL CKHIFCEDCV+E
Sbjct: 374 EQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSE 409


>ref|XP_003552333.1| PREDICTED: RING finger and transmembrane domain-containing protein
           2-like [Glycine max]
          Length = 440

 Score =  349 bits (896), Expect = 2e-94
 Identities = 168/216 (77%), Positives = 188/216 (87%)
 Frame = +3

Query: 3   LFKSNDILRKQTALKGERKISVLICFTVIFMLHVICVYWWYQDADLIYXXXXXXXXXXXX 182
           LFKSNDILRKQTALKGERK+ VL+  +V F LHV+ VYWWYQ+ DL+Y            
Sbjct: 190 LFKSNDILRKQTALKGERKMLVLVGISVGFALHVVGVYWWYQNDDLMYPLIMLPPKDIPP 249

Query: 183 FWHAIFVIMVNDTMVRQAAMVFKCILLMYYKNSGGHNYRRQGQMLTLIEYMLLLYRALLP 362
           FWHAIF+IMVNDT+VRQAAMVFKCILLMYYKNS G NYR+QGQMLTL+EY+LLLYRALLP
Sbjct: 250 FWHAIFIIMVNDTLVRQAAMVFKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLP 309

Query: 363 TPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSIVQKVQLLFSALRALSCKEIQYGSYATS 542
           TPVWYRFFLNKEYGSLFSSL TGLYLTFKLTS+V+KVQ  F+A++ALS KE+ YG+YATS
Sbjct: 310 TPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAAVKALSRKEMHYGAYATS 369

Query: 543 EQINAAGDLCAICQEKMQAPILLSCKHIFCEDCVAE 650
           EQ+NAAGDLCAICQEKM APILL CKHIFCEDCV+E
Sbjct: 370 EQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSE 405


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