BLASTX nr result

ID: Panax21_contig00015979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015979
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513634.1| NADH dehydrogenase, putative [Ricinus commun...   227   2e-57
ref|XP_004140748.1| PREDICTED: probable NADH dehydrogenase [ubiq...   226   3e-57
ref|XP_002864198.1| hypothetical protein ARALYDRAFT_495348 [Arab...   216   4e-54
ref|NP_568778.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomp...   211   7e-53
ref|XP_002305272.1| predicted protein [Populus trichocarpa] gi|1...   211   9e-53

>ref|XP_002513634.1| NADH dehydrogenase, putative [Ricinus communis]
           gi|223547542|gb|EEF49037.1| NADH dehydrogenase, putative
           [Ricinus communis]
          Length = 166

 Score =  227 bits (578), Expect = 2e-57
 Identities = 105/124 (84%), Positives = 115/124 (92%)
 Frame = -3

Query: 629 TLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEEDWEVIEKRLGCGQVEELIEEAQDELKL 450
           TLKEIQAVPEDEGYRKAVESFT+HRLKVCQEEEDWE+IEK+LGCGQVEELIEEAQDELKL
Sbjct: 40  TLKEIQAVPEDEGYRKAVESFTKHRLKVCQEEEDWEMIEKKLGCGQVEELIEEAQDELKL 99

Query: 449 IDKMIEWDPWGVPEDYECEVIENDAPVPKHVPLHRPGPLPEEFYKTLDSVTTGTLEDITI 270
           I+KMIEWDPWGVP+DYECEVIENDAPVPKHVPLHRPGPLPEEFYKTL++V +     +T 
Sbjct: 100 IEKMIEWDPWGVPDDYECEVIENDAPVPKHVPLHRPGPLPEEFYKTLEAVQSKDAPAVTS 159

Query: 269 KKEE 258
            + E
Sbjct: 160 GQSE 163


>ref|XP_004140748.1| PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 5, mitochondrial-like [Cucumis
           sativus] gi|449485470|ref|XP_004157179.1| PREDICTED:
           probable NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 5, mitochondrial-like [Cucumis
           sativus]
          Length = 168

 Score =  226 bits (576), Expect = 3e-57
 Identities = 108/125 (86%), Positives = 114/125 (91%)
 Frame = -3

Query: 629 TLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEEDWEVIEKRLGCGQVEELIEEAQDELKL 450
           TLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEEDWE IEKRLGCGQVEELIEEAQDELKL
Sbjct: 40  TLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKL 99

Query: 449 IDKMIEWDPWGVPEDYECEVIENDAPVPKHVPLHRPGPLPEEFYKTLDSVTTGTLEDITI 270
           I KMIEWDPWGVP+DYECEVIENDAPVPKH+PLHRPGPLPEEFYKTL++++     D T 
Sbjct: 100 IGKMIEWDPWGVPDDYECEVIENDAPVPKHIPLHRPGPLPEEFYKTLEAIS----GDSTK 155

Query: 269 KKEEP 255
           K E P
Sbjct: 156 KVETP 160


>ref|XP_002864198.1| hypothetical protein ARALYDRAFT_495348 [Arabidopsis lyrata subsp.
           lyrata] gi|297310033|gb|EFH40457.1| hypothetical protein
           ARALYDRAFT_495348 [Arabidopsis lyrata subsp. lyrata]
          Length = 169

 Score =  216 bits (549), Expect = 4e-54
 Identities = 99/118 (83%), Positives = 108/118 (91%)
 Frame = -3

Query: 629 TLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEEDWEVIEKRLGCGQVEELIEEAQDELKL 450
           TLKEIQAVPEDEGYRK+VESFTRHRL VC+EEEDWEVIEKRLGCGQVEELIEEA+DEL L
Sbjct: 40  TLKEIQAVPEDEGYRKSVESFTRHRLNVCKEEEDWEVIEKRLGCGQVEELIEEARDELTL 99

Query: 449 IDKMIEWDPWGVPEDYECEVIENDAPVPKHVPLHRPGPLPEEFYKTLDSVTTGTLEDI 276
           I KMIEWDPWGVP+DYECEVIENDAP+PKHVP HRPGPLPEEFYKTL+ +   +  +I
Sbjct: 100 IGKMIEWDPWGVPDDYECEVIENDAPIPKHVPQHRPGPLPEEFYKTLEGLLAESKTEI 157


>ref|NP_568778.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 5 [Arabidopsis
           thaliana] gi|25090853|sp|Q9FLX7.1|NDUA5_ARATH RecName:
           Full=Probable NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 5, mitochondrial; Flags: Precursor
           gi|10177098|dbj|BAB10432.1| unnamed protein product
           [Arabidopsis thaliana] gi|15809966|gb|AAL06910.1|
           AT5g52840/MXC20_6 [Arabidopsis thaliana]
           gi|18958052|gb|AAL79599.1| AT5g52840/MXC20_6
           [Arabidopsis thaliana] gi|332008884|gb|AED96267.1| NADH
           dehydrogenase (ubiquinone) 1 alpha subcomplex 5
           [Arabidopsis thaliana]
          Length = 169

 Score =  211 bits (538), Expect = 7e-53
 Identities = 97/118 (82%), Positives = 107/118 (90%)
 Frame = -3

Query: 629 TLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEEDWEVIEKRLGCGQVEELIEEAQDELKL 450
           TLKEIQAVPEDEGYRKAVESFTR RL VC+EEEDWE+IEKRLGCGQVEELIEEA+DEL L
Sbjct: 40  TLKEIQAVPEDEGYRKAVESFTRQRLNVCKEEEDWEMIEKRLGCGQVEELIEEARDELTL 99

Query: 449 IDKMIEWDPWGVPEDYECEVIENDAPVPKHVPLHRPGPLPEEFYKTLDSVTTGTLEDI 276
           I KMIEWDPWGVP+DYECEVIENDAP+PKHVP HRPGPLPE+FYKTL+ +   +  +I
Sbjct: 100 IGKMIEWDPWGVPDDYECEVIENDAPIPKHVPQHRPGPLPEQFYKTLEGLIAESKTEI 157


>ref|XP_002305272.1| predicted protein [Populus trichocarpa] gi|118481537|gb|ABK92711.1|
           unknown [Populus trichocarpa]
           gi|222848236|gb|EEE85783.1| predicted protein [Populus
           trichocarpa]
          Length = 171

 Score =  211 bits (537), Expect = 9e-53
 Identities = 98/127 (77%), Positives = 112/127 (88%)
 Frame = -3

Query: 629 TLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEEDWEVIEKRLGCGQVEELIEEAQDELKL 450
           TLKEI+AVPEDEGYRKAVESFT HRLKVC+EE DWE IE+R+GCGQVEELIEEAQDELKL
Sbjct: 40  TLKEIKAVPEDEGYRKAVESFTTHRLKVCEEEVDWEKIEERIGCGQVEELIEEAQDELKL 99

Query: 449 IDKMIEWDPWGVPEDYECEVIENDAPVPKHVPLHRPGPLPEEFYKTLDSVTTGTLEDITI 270
           I+KMIEWDPWGVP+DYECE+IENDAP+PKHVP H PGPLP EFY+TL++V T  +E    
Sbjct: 100 IEKMIEWDPWGVPDDYECEIIENDAPIPKHVPRHIPGPLPAEFYQTLEAVQTKRVE---- 155

Query: 269 KKEEPAI 249
            K+ PA+
Sbjct: 156 PKDAPAV 162


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