BLASTX nr result

ID: Panax21_contig00015977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015977
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32081.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002267168.1| PREDICTED: uncharacterized protein LOC100243...   100   2e-19
emb|CAN76448.1| hypothetical protein VITISV_029868 [Vitis vinifera]   100   2e-19
ref|XP_002520213.1| conserved hypothetical protein [Ricinus comm...    88   8e-16
ref|XP_002311792.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>emb|CBI32081.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  105 bits (261), Expect = 5e-21
 Identities = 61/130 (46%), Positives = 82/130 (63%), Gaps = 9/130 (6%)
 Frame = +1

Query: 1   RVGDELDSAFSNSHPTAGSKRSIRDRLGTNVE-------FNNKRHRGDSNRLSTSSADGI 159
           R G  +D AF  S P  GSKRS++DRLG+NV+        NNKR RGD N+L  SS +G+
Sbjct: 22  RAGPMMDGAFLESPPATGSKRSVKDRLGSNVDSLMHENPLNNKRQRGDRNKLHLSS-NGV 80

Query: 160 DDVHLRKDDLRYKIMRKSGNKQTQSDGQQNGVDLREMLSRPARPSTTSLGMQQLRP--KE 333
           +   + KDDLR+KIM KS + + Q++   NG+DLRE LSR  + + TS+ MQ+ RP  KE
Sbjct: 81  NGKRIGKDDLRFKIMEKSMSFRAQTNDLLNGMDLREKLSRTVKHAETSVDMQKPRPETKE 140

Query: 334 ENGRQYMPDR 363
            N    +P R
Sbjct: 141 TNPWGQLPSR 150


>ref|XP_002267168.1| PREDICTED: uncharacterized protein LOC100243328 [Vitis vinifera]
          Length = 334

 Score =  100 bits (248), Expect = 2e-19
 Identities = 62/132 (46%), Positives = 82/132 (62%), Gaps = 11/132 (8%)
 Frame = +1

Query: 1   RVGDELDSAFSNSHPTAGSKRSIRDRLGTNVE-------FNNKRHRGDSNRLSTSSADGI 159
           R G  +D AF  S P  GSKRS++DRLG+NV+        NNKR RGD N+L  SS +G+
Sbjct: 22  RAGPMMDGAFLESPPATGSKRSVKDRLGSNVDSLMHENPLNNKRQRGDRNKLHLSS-NGV 80

Query: 160 DDVHLR--KDDLRYKIMRKSGNKQTQSDGQQNGVDLREMLSRPARPSTTSLGMQQLRP-- 327
           +    R  KDDLR+KIM KS + + Q++   NG+DLRE LSR  + + TS+ MQ+ RP  
Sbjct: 81  NAKGKRIGKDDLRFKIMEKSMSFRAQTNDLLNGMDLREKLSRTVKHAETSVDMQKPRPET 140

Query: 328 KEENGRQYMPDR 363
           KE N    +P R
Sbjct: 141 KETNPWGQLPSR 152


>emb|CAN76448.1| hypothetical protein VITISV_029868 [Vitis vinifera]
          Length = 389

 Score =  100 bits (248), Expect = 2e-19
 Identities = 62/132 (46%), Positives = 82/132 (62%), Gaps = 11/132 (8%)
 Frame = +1

Query: 1   RVGDELDSAFSNSHPTAGSKRSIRDRLGTNVE-------FNNKRHRGDSNRLSTSSADGI 159
           R G  +D AF  S P  GSKRS++DRLG+NV+        NNKR RGD N+L  SS +G+
Sbjct: 22  RAGPMMDGAFLESPPATGSKRSVKDRLGSNVDSLMHENPLNNKRQRGDRNKLHLSS-NGV 80

Query: 160 DDVHLR--KDDLRYKIMRKSGNKQTQSDGQQNGVDLREMLSRPARPSTTSLGMQQLRP-- 327
           +    R  KDDLR+KIM KS + + Q++   NG+DLRE LSR  + + TS+ MQ+ RP  
Sbjct: 81  NAKGKRIGKDDLRFKIMEKSMSFRAQTNDLLNGMDLREKLSRTVKHAETSVDMQKPRPET 140

Query: 328 KEENGRQYMPDR 363
           KE N    +P R
Sbjct: 141 KETNPWGQLPSR 152


>ref|XP_002520213.1| conserved hypothetical protein [Ricinus communis]
           gi|223540705|gb|EEF42268.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 334

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 15/149 (10%)
 Frame = +1

Query: 49  AGSKRSIRDRLGTNVEF---------NNKRHRGDSNRLSTSSADGIDDVHLRKDDLRYKI 201
           AGSKRS+RDRLGTN +          NNKR RG+S  L++ S++G+DDV + KDDLR K+
Sbjct: 33  AGSKRSVRDRLGTNFDSSSSRGGAQPNNKRQRGESY-LTSLSSNGVDDVRIDKDDLRLKL 91

Query: 202 MRKSGNKQTQSDGQQNGVDLREMLSRPARPSTTSLGMQQLR-----PKEENGRQYMPDRN 366
           M+K+ +++  S+ +Q+ +DLRE LSR   P   SL +   R     PKE +    +P   
Sbjct: 92  MQKNASRRAPSNYEQSTMDLREKLSRTVHPPGPSLRIVDTRQHMPAPKEASILGRIPSTR 151

Query: 367 EVRQLMPEVRDVRQHIPETRD-VRQRMPE 450
               L         + P T D +R+R P+
Sbjct: 152 SADDLPRMDSSRNSYSPWTLDHIRRRSPD 180


>ref|XP_002311792.1| predicted protein [Populus trichocarpa] gi|222851612|gb|EEE89159.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 21/162 (12%)
 Frame = +1

Query: 28  FSNSHPTAGSKRSIRDRLGTNVEF--------NNKRHRGDSNRLSTSSADGIDDVHLRKD 183
           +SNS   AGSKRS+ +RLG+N +         +NKR RGD N L++  A+G++D  + KD
Sbjct: 30  YSNSQQGAGSKRSVMERLGSNSDILSLHGNQLSNKRQRGD-NSLTSLGANGVEDARIGKD 88

Query: 184 DLRYKIMRKSGNKQTQSDGQQNGVDLREMLSRPARPSTTSLGMQQLRPKEENGRQYMPDR 363
           DLRYK+M+K+   +TQSD  Q  +DLRE LSR  R     L          + R  +PD 
Sbjct: 89  DLRYKLMQKNVFSRTQSDDDQKTMDLREKLSRTVRSPGPLL-------SNLDARHCLPDP 141

Query: 364 NEVRQL--MPEVR--DVRQHIPETRD---------VRQRMPE 450
            +   L  +P  R  DV  H+  +R+         +R+R P+
Sbjct: 142 KDTSILGRIPPTRSADVLHHMDSSRNSFSPWTLDHIRRRSPD 183


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