BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015942
         (2063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   727   0.0  
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      709   0.0  
ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|2...   705   0.0  
dbj|BAA88922.1| sigma factor [Nicotiana tabacum]                      687   0.0  
ref|XP_002319237.1| predicted protein [Populus trichocarpa] gi|2...   676   0.0  

>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  727 bits (1876), Expect = 0.0
 Identities = 373/509 (73%), Positives = 436/509 (85%), Gaps = 1/509 (0%)
 Frame = +1

Query: 235  MATTAVIGLSAGKRLLSSTFYYSDLAEKLSSSSDHLGFSHHQVTSSKNVINAKRSSNYSP 414
            MAT AVIGLSAGKRLLSSTFYYSDL EKLSS+++H G +H+Q+TS+K +I AK+SSNY P
Sbjct: 1    MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEH-GLTHYQITSTKTLIVAKKSSNYGP 59

Query: 415  NFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHLEDEIANPEFSVDALLLLQKSML 591
            +F SS R+ QSIKA+KEHVDTAS+PS      ++ N +E+E ++ ++SV+ALLLLQKSML
Sbjct: 60   SFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSML 119

Query: 592  EKQWNXXXXXXXXASTSRERTRKKMQVTGSGTAAXXXXXXXXXXVVNQRNYHMQLSTNKQ 771
            EKQWN        + +   +++KK+ VT SG +A           ++Q  + +Q +  KQ
Sbjct: 120  EKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQ 179

Query: 772  QVSVISPNLLQNHLKSYVKGVISEELLTHTEVVQLSKIIKTGLHIEDRKSRLKERLGCEP 951
              S +SP LLQN LK YVKGV+SEELL+H EVV+LS+IIK GL +ED KSRLKERLGC+P
Sbjct: 180  LKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDP 239

Query: 952  SEEQLSSSLKISRAELQYTQIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 1131
            S+EQ+++SLKISRAELQ   I CSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Sbjct: 240  SDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 299

Query: 1132 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTYLHERLSLIRNAKTK 1311
            IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALVENSRTLRLP +LHERL LIRNAK +
Sbjct: 300  IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIR 359

Query: 1312 LEERGITPSIDKIAESLNMSQKKVRNATEAINKVYSLDREAFPSLNGLPGETLHSYIADN 1491
            LEE+G+TPSID+IAESLN+SQKKVRNATEA++KV+SLDREAFPSLNGLPGET HSYIADN
Sbjct: 360  LEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADN 419

Query: 1492 RLENNPWHGVDEWALKDEVNRLMNTTLRERERDIIRLYYGLDNECLTWEDISKRIGLSRE 1671
             LENNPWHGVD+WALKDEVN+L+N TL+ERE++IIRLYYGLDNE LTWEDISKRIGLSRE
Sbjct: 420  CLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRE 479

Query: 1672 RVRQVGLVALEKLKHAARKKRLEAMLVKH 1758
            RVRQVGLVALEKLKHAARKK+LEAMLVKH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKLEAMLVKH 508


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  709 bits (1829), Expect = 0.0
 Identities = 365/507 (71%), Positives = 423/507 (83%)
 Frame = +1

Query: 235  MATTAVIGLSAGKRLLSSTFYYSDLAEKLSSSSDHLGFSHHQVTSSKNVINAKRSSNYSP 414
            M+T AVIGLSAGKRLLSS+FYYSDL EKL+ +SDH    HH V S KNVI AK+SS+YSP
Sbjct: 2    MSTAAVIGLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHH-VPSIKNVITAKKSSDYSP 60

Query: 415  NFLSSRDAQSIKAVKEHVDTASSPSNVEPWIQSSNHLEDEIANPEFSVDALLLLQKSMLE 594
            + +SSR +QS K++KEHVD  + PS+V  W +    L++E  + + SV+ LLLLQKSMLE
Sbjct: 61   SCVSSRKSQSAKSLKEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSMLE 120

Query: 595  KQWNXXXXXXXXASTSRERTRKKMQVTGSGTAAXXXXXXXXXXVVNQRNYHMQLSTNKQQ 774
            KQWN        AS   E+  KKM +T SGT+A          V+++ +     S  K  
Sbjct: 121  KQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKPL 180

Query: 775  VSVISPNLLQNHLKSYVKGVISEELLTHTEVVQLSKIIKTGLHIEDRKSRLKERLGCEPS 954
             S+I P LLQN LK YVKGV+SEELLTH EV+QLSK I+ GL++E++KSRLKERLGCEPS
Sbjct: 181  RSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEPS 240

Query: 955  EEQLSSSLKISRAELQYTQIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 1134
            ++QL+ SLK+SR +LQ T IECSLARE+LAMSNVRLVMSIAQRYDN+GAEMADLVQGGLI
Sbjct: 241  DDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGGLI 300

Query: 1135 GLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTYLHERLSLIRNAKTKL 1314
            GLLRGIEKFD SKG+KISTYVYWWIRQGVS+ALVENSRTLRLPTYLHERLSLIRNAK +L
Sbjct: 301  GLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKARL 360

Query: 1315 EERGITPSIDKIAESLNMSQKKVRNATEAINKVYSLDREAFPSLNGLPGETLHSYIADNR 1494
            EE+GITPS++ IA SLNMSQKKVRNATEA +K+YSLDREAFPSLNGLPGETLHSYIADN 
Sbjct: 361  EEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIADNH 420

Query: 1495 LENNPWHGVDEWALKDEVNRLMNTTLRERERDIIRLYYGLDNECLTWEDISKRIGLSRER 1674
            LENNPWHGVD WALKDEVN L+++TLR+RER+IIRLYYGLDNECLTWEDISKRIGLSRER
Sbjct: 421  LENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLSRER 480

Query: 1675 VRQVGLVALEKLKHAARKKRLEAMLVK 1755
            VRQVGLVALEKLKHAARK++L+AML+K
Sbjct: 481  VRQVGLVALEKLKHAARKRQLDAMLIK 507


>ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|222862757|gb|EEF00264.1|
            predicted protein [Populus trichocarpa]
          Length = 509

 Score =  705 bits (1820), Expect = 0.0
 Identities = 363/509 (71%), Positives = 429/509 (84%), Gaps = 1/509 (0%)
 Frame = +1

Query: 235  MATTAVIGLSAGKRLLSSTFYYSDLAEKLSSSSDHLGFSHHQVTSSKNVINAKRSSNYSP 414
            MAT AVIGLS+GKRLLSS+FYYSDL EKLS+ +DH G +++   ++KNVI AK+SSNY P
Sbjct: 2    MATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDH-GITYYPTATTKNVIVAKKSSNYGP 60

Query: 415  NFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHLEDEIANPEFSVDALLLLQKSML 591
            +F SS R++ SIKA+KEHVDTAS+ SNV  W ++ +  E+E +  ++SV+ALLLLQKSML
Sbjct: 61   SFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120

Query: 592  EKQWNXXXXXXXXASTSRERTRKKMQVTGSGTAAXXXXXXXXXXVVNQRNYHMQLSTNKQ 771
            EKQWN        + ++ ++  KK+ VT SG +A            NQ  +  Q S  K 
Sbjct: 121  EKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKF 180

Query: 772  QVSVISPNLLQNHLKSYVKGVISEELLTHTEVVQLSKIIKTGLHIEDRKSRLKERLGCEP 951
              SV SP+LLQN LK YVKGV+S+E+L HTEVV+LS+II+ GL  ED KSRLKERLGCEP
Sbjct: 181  LRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCEP 240

Query: 952  SEEQLSSSLKISRAELQYTQIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 1131
            S+EQ++ SL+ISRA+LQ   I+CSLAREKLAMSNVRLVMSIAQ+YDNMGAEMADLVQGGL
Sbjct: 241  SDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGGL 300

Query: 1132 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTYLHERLSLIRNAKTK 1311
            IGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALV+NSRTLRLP +LHERL LIRNAK +
Sbjct: 301  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIR 360

Query: 1312 LEERGITPSIDKIAESLNMSQKKVRNATEAINKVYSLDREAFPSLNGLPGETLHSYIADN 1491
            LEE+G+TPSID+IAESLNMSQ+KVRNATEAI+KV+SLDREAFPSLNGLPGET HSYIADN
Sbjct: 361  LEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 1492 RLENNPWHGVDEWALKDEVNRLMNTTLRERERDIIRLYYGLDNECLTWEDISKRIGLSRE 1671
            R ENNPWHGVDEWALK+EVN+L+++TL+ERE++IIRLY+GLD ECLTWEDISKR+GLSRE
Sbjct: 421  RPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSRE 480

Query: 1672 RVRQVGLVALEKLKHAARKKRLEAMLVKH 1758
            RVRQVGLVALEKLKHAARK+  EAMLVKH
Sbjct: 481  RVRQVGLVALEKLKHAARKRNTEAMLVKH 509


>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
          Length = 502

 Score =  687 bits (1774), Expect = 0.0
 Identities = 362/505 (71%), Positives = 415/505 (82%), Gaps = 1/505 (0%)
 Frame = +1

Query: 247  AVIGLSAGKRLLSSTFYYSDLAEKLSSSSDHLGFSHHQVTSSKNVINAKRSSNYSPNFLS 426
            A+IGLSAG R+LSS+FYYS L EK   S DH    HH   S KNVINAK SSNYSP+++S
Sbjct: 3    AIIGLSAGNRILSSSFYYSVLTEKFCVS-DHALPCHH-FPSPKNVINAKNSSNYSPSYVS 60

Query: 427  SRDAQSIKAVKEHVDTASS-PSNVEPWIQSSNHLEDEIANPEFSVDALLLLQKSMLEKQW 603
            +R  QS+KA+KEHVD AS+  S+ EPW+Q    L++   + E SV+ LLLLQKSMLEKQW
Sbjct: 61   NRKKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQNGSCSEEDSVEVLLLLQKSMLEKQW 120

Query: 604  NXXXXXXXXASTSRERTRKKMQVTGSGTAAXXXXXXXXXXVVNQRNYHMQLSTNKQQVSV 783
            N        A T+    +KKMQ+T SGT+A           +  +N     S++K+  SV
Sbjct: 121  NLSAEK---AMTNENNCKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSDSSSKRLRSV 177

Query: 784  ISPNLLQNHLKSYVKGVISEELLTHTEVVQLSKIIKTGLHIEDRKSRLKERLGCEPSEEQ 963
            I P LLQN  K Y+ GV+ +ELLTHTEVVQLSK IK GL++E++KSRLKERLGCEPS++Q
Sbjct: 178  IGPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQ 237

Query: 964  LSSSLKISRAELQYTQIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLL 1143
            L+ SLKISRA+L+ T IECSLAREKLAMSNVRLVMSIAQRYD  G EMADL+QGGLIGLL
Sbjct: 238  LAISLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDTNGTEMADLIQGGLIGLL 297

Query: 1144 RGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTYLHERLSLIRNAKTKLEER 1323
            RGIEKFD S+GFKISTYVYWWIRQGVS+ALVENSRTLRLP +LHERLSLIRNAK KL+E 
Sbjct: 298  RGIEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKEN 357

Query: 1324 GITPSIDKIAESLNMSQKKVRNATEAINKVYSLDREAFPSLNGLPGETLHSYIADNRLEN 1503
            GITPSI+KIAE LNMSQKKVRNATEA +KV+SLDREAFPSLNGLPGETLHSYIADNRLEN
Sbjct: 358  GITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRLEN 417

Query: 1504 NPWHGVDEWALKDEVNRLMNTTLRERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQ 1683
             PWHGVDEW LKDEVN L+++TLRERER+I+RLYYGLDNECLTWEDIS+RIGLSRERVRQ
Sbjct: 418  IPWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLTWEDISRRIGLSRERVRQ 477

Query: 1684 VGLVALEKLKHAARKKRLEAMLVKH 1758
            VGLVALEKLKHAARK+RL+AMLVKH
Sbjct: 478  VGLVALEKLKHAARKRRLDAMLVKH 502


>ref|XP_002319237.1| predicted protein [Populus trichocarpa] gi|222857613|gb|EEE95160.1|
            predicted protein [Populus trichocarpa]
          Length = 499

 Score =  676 bits (1743), Expect = 0.0
 Identities = 351/509 (68%), Positives = 419/509 (82%), Gaps = 1/509 (0%)
 Frame = +1

Query: 235  MATTAVIGLSAGKRLLSSTFYYSDLAEKLSSSSDHLGFSHHQVTSSKNVINAKRSSNYSP 414
            MAT + IGL+ GKRLLSS+FY+SDL EKLS+ +DH G +H+Q+T++K+VI AK+SS Y P
Sbjct: 2    MATASFIGLTTGKRLLSSSFYFSDLTEKLSNVNDH-GVAHYQITTTKSVIVAKKSSKYGP 60

Query: 415  NFLSS-RDAQSIKAVKEHVDTASSPSNVEPWIQSSNHLEDEIANPEFSVDALLLLQKSML 591
            +F SS R+  S KA+KE +DTAS+ S V  W ++ +  E+E +  ++SV+AL+LLQKSML
Sbjct: 61   SFPSSYRNPHSNKALKELIDTASASSTVATWFKTLDDFEEESSVLDYSVEALILLQKSML 120

Query: 592  EKQWNXXXXXXXXASTSRERTRKKMQVTGSGTAAXXXXXXXXXXVVNQRNYHMQLSTNKQ 771
            EKQWN        + +  +++ KK+ VT SG +A            NQ  +         
Sbjct: 121  EKQWNLSFESINSSDSKIKKSNKKIPVTCSGVSARQRRLNNKRKNQNQSKF--------- 171

Query: 772  QVSVISPNLLQNHLKSYVKGVISEELLTHTEVVQLSKIIKTGLHIEDRKSRLKERLGCEP 951
             +S ISP LL N LK YVKGV+S+E+L HTEVV+LS+II+ GL +ED KS LKERLGCEP
Sbjct: 172  -MSDISPGLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERLGCEP 230

Query: 952  SEEQLSSSLKISRAELQYTQIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 1131
            S+EQL+ SL+ISRA+LQ   I+CSLAREKLAMSNVRLVMSIAQ+ DNMGAEMADLVQ GL
Sbjct: 231  SDEQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLVQAGL 290

Query: 1132 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTYLHERLSLIRNAKTK 1311
            IGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVEN RTLRLP +LHERL LIRNAK +
Sbjct: 291  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLHERLGLIRNAKIR 350

Query: 1312 LEERGITPSIDKIAESLNMSQKKVRNATEAINKVYSLDREAFPSLNGLPGETLHSYIADN 1491
            LEE+G+TPSID+IAESLNMSQ+KVRNATEAI+KV+SLDREAFPSLNGLPGET HSYIADN
Sbjct: 351  LEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 410

Query: 1492 RLENNPWHGVDEWALKDEVNRLMNTTLRERERDIIRLYYGLDNECLTWEDISKRIGLSRE 1671
            RLENNPWHGVDEWALK+EVN+L+++ L+ERER+IIRLY+GLD ECLTWEDISKR+GLSRE
Sbjct: 411  RLENNPWHGVDEWALKEEVNKLIDSALQEREREIIRLYHGLDKECLTWEDISKRMGLSRE 470

Query: 1672 RVRQVGLVALEKLKHAARKKRLEAMLVKH 1758
            RVRQVGLVALEKLKHAARK +LEAMLVKH
Sbjct: 471  RVRQVGLVALEKLKHAARKGKLEAMLVKH 499