BLASTX nr result

ID: Panax21_contig00015933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015933
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523341.1| Ubiquitin ligase SINAT3, putative [Ricinus c...   270   7e-71
ref|XP_002523339.1| Ubiquitin ligase SINAT3, putative [Ricinus c...   270   7e-71
ref|XP_002302632.1| predicted protein [Populus trichocarpa] gi|1...   270   7e-71
ref|XP_002318423.1| predicted protein [Populus trichocarpa] gi|2...   270   9e-71
ref|XP_002516674.1| Ubiquitin ligase SINAT3, putative [Ricinus c...   270   1e-70

>ref|XP_002523341.1| Ubiquitin ligase SINAT3, putative [Ricinus communis]
           gi|223537429|gb|EEF39057.1| Ubiquitin ligase SINAT3,
           putative [Ricinus communis]
          Length = 326

 Score =  270 bits (691), Expect = 7e-71
 Identities = 124/131 (94%), Positives = 128/131 (97%)
 Frame = +1

Query: 1   GDIPSLVSHLRDDHKVDMHTGCTFNHRYVKANPHEVENATWMLTVFHCFGQYFCLHFEAF 180
           GDIP LV+HLRDDHKVDMH+GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAF
Sbjct: 163 GDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAF 222

Query: 181 QLGMAPVYMAFLRFMGDEADARNYSYSLEVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGL 360
           QLGMAPVYMAFLRFMGDE DARNYSYSLEVGGNGRKLIWEGTPRS+RDSHRKVRDSHDGL
Sbjct: 223 QLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGL 282

Query: 361 IIQRNMALFFS 393
           IIQRNMALFFS
Sbjct: 283 IIQRNMALFFS 293


>ref|XP_002523339.1| Ubiquitin ligase SINAT3, putative [Ricinus communis]
           gi|223537427|gb|EEF39055.1| Ubiquitin ligase SINAT3,
           putative [Ricinus communis]
          Length = 326

 Score =  270 bits (691), Expect = 7e-71
 Identities = 124/131 (94%), Positives = 128/131 (97%)
 Frame = +1

Query: 1   GDIPSLVSHLRDDHKVDMHTGCTFNHRYVKANPHEVENATWMLTVFHCFGQYFCLHFEAF 180
           GDIP LV+HLRDDHKVDMH+GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAF
Sbjct: 163 GDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAF 222

Query: 181 QLGMAPVYMAFLRFMGDEADARNYSYSLEVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGL 360
           QLGMAPVYMAFLRFMGDE DARNYSYSLEVGGNGRKLIWEGTPRS+RDSHRKVRDSHDGL
Sbjct: 223 QLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGL 282

Query: 361 IIQRNMALFFS 393
           IIQRNMALFFS
Sbjct: 283 IIQRNMALFFS 293


>ref|XP_002302632.1| predicted protein [Populus trichocarpa] gi|118486216|gb|ABK94950.1|
           unknown [Populus trichocarpa]
           gi|222844358|gb|EEE81905.1| predicted protein [Populus
           trichocarpa]
          Length = 330

 Score =  270 bits (691), Expect = 7e-71
 Identities = 124/131 (94%), Positives = 129/131 (98%)
 Frame = +1

Query: 1   GDIPSLVSHLRDDHKVDMHTGCTFNHRYVKANPHEVENATWMLTVFHCFGQYFCLHFEAF 180
           GDIP LV+HLRDDHKVDMH+GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAF
Sbjct: 167 GDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAF 226

Query: 181 QLGMAPVYMAFLRFMGDEADARNYSYSLEVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGL 360
           QLGMAPVYMAFLRFMGDEA+ARNYSYSLEVGGNGRKLIWEGTPRS+RDSHRKVRDSHDGL
Sbjct: 227 QLGMAPVYMAFLRFMGDEAEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGL 286

Query: 361 IIQRNMALFFS 393
           IIQRNMALFFS
Sbjct: 287 IIQRNMALFFS 297


>ref|XP_002318423.1| predicted protein [Populus trichocarpa] gi|222859096|gb|EEE96643.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score =  270 bits (690), Expect = 9e-71
 Identities = 125/131 (95%), Positives = 128/131 (97%)
 Frame = +1

Query: 1   GDIPSLVSHLRDDHKVDMHTGCTFNHRYVKANPHEVENATWMLTVFHCFGQYFCLHFEAF 180
           GDIP LV+HLRDDHKVDMH GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAF
Sbjct: 169 GDIPFLVAHLRDDHKVDMHIGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAF 228

Query: 181 QLGMAPVYMAFLRFMGDEADARNYSYSLEVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGL 360
           QLGMAPVYMAFLRFMGDEA+ARNYSYSLEVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGL
Sbjct: 229 QLGMAPVYMAFLRFMGDEAEARNYSYSLEVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGL 288

Query: 361 IIQRNMALFFS 393
           IIQRNMALFFS
Sbjct: 289 IIQRNMALFFS 299


>ref|XP_002516674.1| Ubiquitin ligase SINAT3, putative [Ricinus communis]
           gi|223544169|gb|EEF45693.1| Ubiquitin ligase SINAT3,
           putative [Ricinus communis]
          Length = 346

 Score =  270 bits (689), Expect = 1e-70
 Identities = 125/131 (95%), Positives = 127/131 (96%)
 Frame = +1

Query: 1   GDIPSLVSHLRDDHKVDMHTGCTFNHRYVKANPHEVENATWMLTVFHCFGQYFCLHFEAF 180
           GDIP LVSHLRDDHKVDMHTGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAF
Sbjct: 183 GDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAF 242

Query: 181 QLGMAPVYMAFLRFMGDEADARNYSYSLEVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGL 360
           QLGMAPVYMAFLRFMGDE +ARNYSYSLEVG NGRKLIWEGTPRSVRDSHRKVRDSHDGL
Sbjct: 243 QLGMAPVYMAFLRFMGDETEARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGL 302

Query: 361 IIQRNMALFFS 393
           IIQRNMALFFS
Sbjct: 303 IIQRNMALFFS 313


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