BLASTX nr result

ID: Panax21_contig00015911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015911
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608039.1| La-related protein [Medicago truncatula] gi|...   100   6e-19
ref|XP_003520171.1| PREDICTED: uncharacterized protein LOC100808...    99   8e-19
ref|XP_003528499.1| PREDICTED: uncharacterized protein LOC100796...    97   3e-18
ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinu...    95   2e-17
emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]    94   3e-17

>ref|XP_003608039.1| La-related protein [Medicago truncatula]
           gi|355509094|gb|AES90236.1| La-related protein [Medicago
           truncatula]
          Length = 442

 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 53/101 (52%), Positives = 63/101 (62%)
 Frame = -3

Query: 630 KKVKQKHPFTEKEKEDLQACTIVVENLPDDNSHQNLEKIFNVVGRFDIFPAC*ILFLDMS 451
           KKVK+KHPF EKEKE+L + T+V ENLPDD+SHQNL+KIF VVG                
Sbjct: 172 KKVKRKHPFAEKEKEELMSRTVVAENLPDDHSHQNLQKIFGVVG---------------- 215

Query: 450 RRSACGY**TVLHSVKTIRICHPPDANSSRLKGNIIISNKV 328
                        S+KTIRICHP + NSSR KG+ +ISNKV
Sbjct: 216 -------------SIKTIRICHPQEPNSSRPKGDFLISNKV 243


>ref|XP_003520171.1| PREDICTED: uncharacterized protein LOC100808205 [Glycine max]
          Length = 404

 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 53/101 (52%), Positives = 63/101 (62%)
 Frame = -3

Query: 630 KKVKQKHPFTEKEKEDLQACTIVVENLPDDNSHQNLEKIFNVVGRFDIFPAC*ILFLDMS 451
           KKVK+KHP+TEKEKEDL A T+V ENLPDD+SHQNL+KIF +VG                
Sbjct: 170 KKVKRKHPYTEKEKEDLLARTVVAENLPDDHSHQNLQKIFGIVG---------------- 213

Query: 450 RRSACGY**TVLHSVKTIRICHPPDANSSRLKGNIIISNKV 328
                        SVKTIRICHP + NSSR K + I+SNK+
Sbjct: 214 -------------SVKTIRICHPQEPNSSRPKSDFIVSNKL 241


>ref|XP_003528499.1| PREDICTED: uncharacterized protein LOC100796786 [Glycine max]
          Length = 399

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 51/101 (50%), Positives = 63/101 (62%)
 Frame = -3

Query: 630 KKVKQKHPFTEKEKEDLQACTIVVENLPDDNSHQNLEKIFNVVGRFDIFPAC*ILFLDMS 451
           KKVK+KHP+TE+EKEDLQ+ T+V ENLPDD+SHQNL+KIF +VG                
Sbjct: 168 KKVKRKHPYTEREKEDLQSRTVVAENLPDDHSHQNLQKIFGMVG---------------- 211

Query: 450 RRSACGY**TVLHSVKTIRICHPPDANSSRLKGNIIISNKV 328
                        SVKTIRICHP + NSSR K +  +SNK+
Sbjct: 212 -------------SVKTIRICHPQEPNSSRPKSDFFVSNKL 239


>ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223538880|gb|EEF40478.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 440

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 51/101 (50%), Positives = 65/101 (64%)
 Frame = -3

Query: 630 KKVKQKHPFTEKEKEDLQACTIVVENLPDDNSHQNLEKIFNVVGRFDIFPAC*ILFLDMS 451
           KKVK+K PFTEK++E+LQ+ T+VVENLP+D+SHQNLEKIF+VVG                
Sbjct: 205 KKVKRKLPFTEKDREELQSRTVVVENLPEDHSHQNLEKIFSVVG---------------- 248

Query: 450 RRSACGY**TVLHSVKTIRICHPPDANSSRLKGNIIISNKV 328
                        SVKTIRICHP ++NSSR K +  +SNK+
Sbjct: 249 -------------SVKTIRICHPQESNSSRTKSDFFMSNKL 276


>emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]
          Length = 941

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 50/101 (49%), Positives = 64/101 (63%)
 Frame = -3

Query: 630 KKVKQKHPFTEKEKEDLQACTIVVENLPDDNSHQNLEKIFNVVGRFDIFPAC*ILFLDMS 451
           KKV++KH FTE++KE+LQA T+V ENLPDD+SHQNL+KIF+VVG                
Sbjct: 161 KKVRRKHLFTERDKEELQAHTVVAENLPDDHSHQNLQKIFSVVG---------------- 204

Query: 450 RRSACGY**TVLHSVKTIRICHPPDANSSRLKGNIIISNKV 328
                        SVK IRICHP ++N+SR KG+  ISNK+
Sbjct: 205 -------------SVKNIRICHPQESNNSRSKGDFFISNKL 232


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