BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015906
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...   185   1e-54
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               139   2e-41
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   136   3e-41
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   128   4e-39
gb|EEE51936.1| hypothetical protein OsJ_33562 [Oryza sativa Japo...   130   2e-37

>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score =  185 bits (469), Expect(2) = 1e-54
 Identities = 107/274 (39%), Positives = 155/274 (56%), Gaps = 6/274 (2%)
 Frame = -3

Query: 830  MSDFRPISCCNTTYKCISKIIASRLKGILPTIISPYQSAFIPGRRIGDNILLAQELFRNY 651
            M D+RPISCCN  YK ISKIIA+RLK +LP  I+  QSAF+  R + +N+LLA EL ++Y
Sbjct: 941  MKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLLATELVKDY 1000

Query: 650  HRLYGPARCAMKIDLRKAFDFISWDFLLNALKFLTFLQNSCIGLRPALPRPTFL*RLMVL 471
            H+     RCA+KID+ KAFD + W FL N L  L F              P F+   ++L
Sbjct: 1001 HKDTISGRCAIKIDISKAFDSVQWSFLKNVLSALDF-------------PPEFV-HWVML 1046

Query: 470  FVATLMVLLGVPLITSKLSLADCQPLLEKVKSRISSWTNKFLSYAGRLQLIKSVIYAIQA 291
             V T    + V     +L+    Q   E++K +I SWT +FLSYAGRL LI SV+++I  
Sbjct: 1047 CVTTASFSVQV---NGELA-GYFQSSREQLKKKIGSWTARFLSYAGRLNLISSVLWSICN 1102

Query: 290  YWSAHFILPAAALKDLQSTLSRFLWKGPSLQKYGSKVAWNKISLPFTEGGLAIKNLEDWN 111
            +W A F LP   ++++    S FLW GP L  + +KVAW+ +  P  EGGL ++++++ N
Sbjct: 1103 FWLAAFRLPRKCIREIDKLCSTFLWSGPDLNSHKAKVAWDDVCKPKKEGGLGLRSIKEAN 1162

Query: 110  KSLIMMHLWKVITPSNSI------WATWVREVQL 27
              +      K +    +       W+T  R V++
Sbjct: 1163 DDMAKQFCKKEVNTGRNTFFWYDDWSTLGRLVEI 1196



 Score = 55.5 bits (132), Expect(2) = 1e-54
 Identities = 24/55 (43%), Positives = 34/55 (61%)
 Frame = -1

Query: 1012 MKQNKSPGPDEFNVNFFIHTWDIVRNVFTSVI*SFFRQGCLLRGTNSTAIALVPK 848
            M  +KSPGPD +   F+   WDI+   F   + SFF +G L +G N+T +AL+PK
Sbjct: 880  MPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTTILALIPK 934


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  108 bits (271), Expect(3) = 2e-41
 Identities = 53/96 (55%), Positives = 68/96 (70%)
 Frame = -3

Query: 830 MSDFRPISCCNTTYKCISKIIASRLKGILPTIISPYQSAFIPGRRIGDNILLAQELFRNY 651
           M D+RPISCCN  YK ISKIIA+RLK +LP  I+  QSAF+  R + +N+LLA EL ++Y
Sbjct: 173 MRDYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDY 232

Query: 650 HRLYGPARCAMKIDLRKAFDFISWDFLLNALKFLTF 543
           H+    ARCA+KID+ KAFD + W FL N L  + F
Sbjct: 233 HKDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNF 268



 Score = 57.8 bits (138), Expect(3) = 2e-41
 Identities = 26/55 (47%), Positives = 37/55 (67%)
 Frame = -1

Query: 1012 MKQNKSPGPDEFNVNFFIHTWDIVRNVFTSVI*SFFRQGCLLRGTNSTAIALVPK 848
            M ++KSPGPD +   F+  TWDI+   FT  + SFF++G L +G NS  +AL+PK
Sbjct: 112  MPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPK 166



 Score = 50.8 bits (120), Expect(3) = 2e-41
 Identities = 21/36 (58%), Positives = 25/36 (69%)
 Frame = -2

Query: 549 NFPPKFLYWIKACITTTNFSVKVNGTLCGYFNGALG 442
           NF P F++WI  CITT +FSV+VNG L GYF    G
Sbjct: 267 NFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRG 302



 Score =  139 bits (349), Expect = 1e-30
 Identities = 59/146 (40%), Positives = 96/146 (65%)
 Frame = -3

Query: 446 LGVPLITSKLSLADCQPLLEKVKSRISSWTNKFLSYAGRLQLIKSVIYAIQAYWSAHFIL 267
           LG+PL+T +L+ AD  PLLE++K RI++WT +F S+AGR  LIKSV+++I  +W A F L
Sbjct: 419 LGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRL 478

Query: 266 PAAALKDLQSTLSRFLWKGPSLQKYGSKVAWNKISLPFTEGGLAIKNLEDWNKSLIMMHL 87
           P   ++++    S FLW G  +  + +K++W+ +  P  EGGL ++NL++ N    +  +
Sbjct: 479 PRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLV 538

Query: 86  WKVITPSNSIWATWVREVQLKHKFFW 9
           W++I+ SNS+W  WV E  ++ K  W
Sbjct: 539 WRIISNSNSLWTKWVAEYLIRKKSIW 564


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  112 bits (281), Expect(3) = 3e-41
 Identities = 54/96 (56%), Positives = 69/96 (71%)
 Frame = -3

Query: 830  MSDFRPISCCNTTYKCISKIIASRLKGILPTIISPYQSAFIPGRRIGDNILLAQELFRNY 651
            M D+RPISCCN  YK ISKI+A+RLK +LP+ I   QSAF+  R + +N+LLA EL ++Y
Sbjct: 823  MKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDY 882

Query: 650  HRLYGPARCAMKIDLRKAFDFISWDFLLNALKFLTF 543
            H+     RCAMKID+ KAFD + W FLLN L+ L F
Sbjct: 883  HKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNF 918



 Score = 54.7 bits (130), Expect(3) = 3e-41
 Identities = 26/55 (47%), Positives = 34/55 (61%)
 Frame = -1

Query: 1012 MKQNKSPGPDEFNVNFFIHTWDIVRNVFTSVI*SFFRQGCLLRGTNSTAIALVPK 848
            M  NKSPGPD +   FF  TW +    F + I SFF +G L +G N+T +AL+PK
Sbjct: 762  MPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPK 816



 Score = 48.9 bits (115), Expect(3) = 3e-41
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = -2

Query: 549  NFPPKFLYWIKACITTTNFSVKVNGTLCGYFNGALG 442
            NFP  F +WIK CI+T  FSV+VNG L G+F  + G
Sbjct: 917  NFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRG 952



 Score =  136 bits (342), Expect = 9e-30
 Identities = 61/146 (41%), Positives = 95/146 (65%)
 Frame = -3

Query: 446  LGVPLITSKLSLADCQPLLEKVKSRISSWTNKFLSYAGRLQLIKSVIYAIQAYWSAHFIL 267
            LG+PL+T +++ AD  PL+E VK++ISSWT + LSYAGRL L+ SVI +I  +W + + L
Sbjct: 1069 LGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRL 1128

Query: 266  PAAALKDLQSTLSRFLWKGPSLQKYGSKVAWNKISLPFTEGGLAIKNLEDWNKSLIMMHL 87
            PA  +++++   S FLW GP L    +K+AW+ I  P  EGGL IK+L + NK   +  +
Sbjct: 1129 PAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLI 1188

Query: 86   WKVITPSNSIWATWVREVQLKHKFFW 9
            W++++   S+W TW+    ++   FW
Sbjct: 1189 WRLLSTQPSLWVTWIWTFIIRKGTFW 1214


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  105 bits (263), Expect(3) = 4e-39
 Identities = 51/96 (53%), Positives = 66/96 (68%)
 Frame = -3

Query: 830 MSDFRPISCCNTTYKCISKIIASRLKGILPTIISPYQSAFIPGRRIGDNILLAQELFRNY 651
           + D+RPISCCN  YK ISKI+A+RLK ILP  I   QSAF+  R + +N+LLA EL ++Y
Sbjct: 247 IKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDY 306

Query: 650 HRLYGPARCAMKIDLRKAFDFISWDFLLNALKFLTF 543
           H+     RCAMKID+ KAFD + W FL + L  + F
Sbjct: 307 HKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNF 342



 Score = 53.1 bits (126), Expect(3) = 4e-39
 Identities = 24/55 (43%), Positives = 36/55 (65%)
 Frame = -1

Query: 1012 MKQNKSPGPDEFNVNFFIHTWDIVRNVFTSVI*SFFRQGCLLRGTNSTAIALVPK 848
            M ++KSPGPD +   F+  +W+I+ +     I SFF +G L +G NST +AL+PK
Sbjct: 186  MPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPK 240



 Score = 50.4 bits (119), Expect(3) = 4e-39
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = -2

Query: 549 NFPPKFLYWIKACITTTNFSVKVNGTLCGYFNGALG 442
           NFP +F++WI  C++T +FS++VNG L GYF  A G
Sbjct: 341 NFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARG 376



 Score =  128 bits (321), Expect = 3e-27
 Identities = 55/146 (37%), Positives = 93/146 (63%)
 Frame = -3

Query: 446 LGVPLITSKLSLADCQPLLEKVKSRISSWTNKFLSYAGRLQLIKSVIYAIQAYWSAHFIL 267
           LG+PL+T +L+ +D  PL+++++ RI  WT+++LS+AGRL LI SV+++I  +W   F L
Sbjct: 493 LGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRL 552

Query: 266 PAAALKDLQSTLSRFLWKGPSLQKYGSKVAWNKISLPFTEGGLAIKNLEDWNKSLIMMHL 87
           P   + ++    S  LW GP L    +KV+W++I  P  EGGL +++L + NK   +  +
Sbjct: 553 PRECINEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSSLKLI 612

Query: 86  WKVITPSNSIWATWVREVQLKHKFFW 9
           W++++  +S+W  W R   LK + FW
Sbjct: 613 WRLLSCQDSLWVKWTRMNLLKKESFW 638


>gb|EEE51936.1| hypothetical protein OsJ_33562 [Oryza sativa Japonica Group]
          Length = 419

 Score =  130 bits (328), Expect(2) = 2e-37
 Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 3/276 (1%)
 Frame = -3

Query: 839 PSSMSDFRPISCCNTTYKCISKIIASRLKGILPTIISPYQSAFIPGRRIGDNILLAQELF 660
           P  + D+RPIS CN  YK +SK + +RL+ +L  ++S  QSA I GR I DN LLA E F
Sbjct: 111 PLELKDYRPISLCNVVYKVVSKCLVNRLRPVLDEVVSEEQSASIQGRMITDNALLAFECF 170

Query: 659 R--NYHRLYGPARCAMKIDLRKAFDFISWDFLLNALKFLTFLQNSCIG-LRPALPRPTFL 489
                +++   A CA K+DL KA+D + W FL  A+  L   Q   +  +     R T  
Sbjct: 171 HAIQKNKVADKAACAYKLDLSKAYDRVDWRFLEMAMNRLEVHQAEVVNEVLQCYARGTEK 230

Query: 488 *RLMVLFVATLMVLLGVPLITSKLSLADCQPLLEKVKSRISSWTNKFLSYAGRLQLIKSV 309
            +    +       LG P    ++     Q L  K+  R+  W   +LS  G+  LIK+V
Sbjct: 231 DKFEDKY-------LGFPTPEGRMHKGRFQTLQAKICKRVIQWGENYLSSGGKEILIKAV 283

Query: 308 IYAIQAYWSAHFILPAAALKDLQSTLSRFLWKGPSLQKYGSKVAWNKISLPFTEGGLAIK 129
           + AI  Y    F LP +  +DL      F W   + ++     AW  ++ P   GGL  K
Sbjct: 284 MQAIPVYVMGIFKLPDSVCEDLTRLTRNFWWGADNGRRKTHWRAWECLTKPKRNGGLGFK 343

Query: 128 NLEDWNKSLIMMHLWKVITPSNSIWATWVREVQLKH 21
           ++  +N++L+    W++I   +S+ A  ++     H
Sbjct: 344 DIRLFNQALLARQAWRLIEFPDSLCAKVLKAKYYPH 379



 Score = 52.4 bits (124), Expect(2) = 2e-37
 Identities = 22/55 (40%), Positives = 30/55 (54%)
 Frame = -1

Query: 1000 KSPGPDEFNVNFFIHTWDIVRNVFTSVI*SFFRQGCLLRGTNSTAIALVPKIPNP 836
            KSPGPD F   F+   W  ++      +  FF+ G +  G N+TAI L+PKI  P
Sbjct: 57   KSPGPDGFPARFYQRNWGTLKTYIVRAVRDFFQSGIMPEGVNNTAIVLIPKIEQP 111