BLASTX nr result

ID: Panax21_contig00015886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015886
         (1274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277930.1| PREDICTED: putative DNA-binding protein ESCA...   176   9e-42
emb|CAN75757.1| hypothetical protein VITISV_028561 [Vitis vinifera]   162   2e-37
ref|XP_002524209.1| ESC, putative [Ricinus communis] gi|22353648...   161   3e-37
emb|CBI31637.3| unnamed protein product [Vitis vinifera]              161   3e-37
gb|ABL63121.1| AT-hook DNA-binding protein [Catharanthus roseus]      159   1e-36

>ref|XP_002277930.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
            vinifera]
          Length = 327

 Score =  176 bits (447), Expect = 9e-42
 Identities = 119/267 (44%), Positives = 139/267 (52%), Gaps = 1/267 (0%)
 Frame = -3

Query: 1272 NSSGSNPNTNSANQNREEDGNGQDNEQQELAE-DHNVGALEIYEXXXXXXXXXXXXXXXX 1096
            +SS +NPN ++ANQN EE+    D+ + +L + + N G  EI E                
Sbjct: 65   SSSNTNPNPSAANQNPEEE----DSREIDLEDSEQNAGGHEIAEPSSAGRRPRGRPPGSK 120

Query: 1095 XXXXXPIVITKENPNALRSHVLEISNGSDVVECIVTFSQRRHCGVSVLSGNGIVNNVTLR 916
                 PIVITKE+PNALRSHVLEIS+GSD+ E I  F+QRRH GVSVLS +GIVNNVTLR
Sbjct: 121  NKPKPPIVITKESPNALRSHVLEISSGSDIAESIANFAQRRHRGVSVLSASGIVNNVTLR 180

Query: 915  QPAAPGGIITLQGRFEIXXXXXXXXXXXXXXXXXXLTVYLAXXXXXXXXXXXXXXXVASG 736
            QPAAPGG+ITLQGRFEI                  LTVYLA               +ASG
Sbjct: 181  QPAAPGGVITLQGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGSVVGALMASG 240

Query: 735  PVMVIAATFTNATYXXXXXXXXXXXXXXXGMQLQATXXXXXXXXXXXXXXXXAQSHGDQA 556
            PV+VIAATF+NAT+                 Q                     QSHG   
Sbjct: 241  PVIVIAATFSNATFERLPLEDEPANEGIQMPQTSGV-------NSGTGGTSAPQSHG-LV 292

Query: 555  AASSMPIYXXXXXXXXNGQMHHDVFWA 475
              SSMPIY        NGQM HDVFWA
Sbjct: 293  DPSSMPIYNLPPNLLPNGQMPHDVFWA 319


>emb|CAN75757.1| hypothetical protein VITISV_028561 [Vitis vinifera]
          Length = 293

 Score =  162 bits (409), Expect = 2e-37
 Identities = 110/254 (43%), Positives = 127/254 (50%), Gaps = 1/254 (0%)
 Frame = -3

Query: 1233 QNREEDGNGQDNEQQELAE-DHNVGALEIYEXXXXXXXXXXXXXXXXXXXXXPIVITKEN 1057
            Q R  +   +D+ + +L + + N G  EI E                     PIVITKE+
Sbjct: 40   QKRARNPEEEDSREIDLEDSEQNAGGHEIAEPSSAGRRPRGRPPGSKNKPKPPIVITKES 99

Query: 1056 PNALRSHVLEISNGSDVVECIVTFSQRRHCGVSVLSGNGIVNNVTLRQPAAPGGIITLQG 877
            PNALRSHVLEIS+GSD+ E I  F+QRRH GVSVLS +GIVNNVTLRQPAAPGG+ITLQG
Sbjct: 100  PNALRSHVLEISSGSDIAESIANFAQRRHRGVSVLSASGIVNNVTLRQPAAPGGVITLQG 159

Query: 876  RFEIXXXXXXXXXXXXXXXXXXLTVYLAXXXXXXXXXXXXXXXVASGPVMVIAATFTNAT 697
            RFEI                  LTVYLA               +ASGPV+VIAATF+NAT
Sbjct: 160  RFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGSVVGALMASGPVIVIAATFSNAT 219

Query: 696  YXXXXXXXXXXXXXXXGMQLQATXXXXXXXXXXXXXXXXAQSHGDQAAASSMPIYXXXXX 517
            +                 Q                     QSHG     SSMPIY     
Sbjct: 220  FERLPLEDEPANEGIQMPQTSGV-------NSGTGGTSAPQSHG-LVDPSSMPIYNJPPN 271

Query: 516  XXXNGQMHHDVFWA 475
               NGQM HDVFWA
Sbjct: 272  LLPNGQMPHDVFWA 285


>ref|XP_002524209.1| ESC, putative [Ricinus communis] gi|223536486|gb|EEF38133.1| ESC,
            putative [Ricinus communis]
          Length = 342

 Score =  161 bits (408), Expect = 3e-37
 Identities = 107/271 (39%), Positives = 139/271 (51%), Gaps = 7/271 (2%)
 Frame = -3

Query: 1269 SSGSNPNTNSANQNREEDGNGQDNEQQELAEDHNVGALEIYEXXXXXXXXXXXXXXXXXX 1090
            ++ ++  T + NQ+++E  + +DN Q+  +EDHN+ ALE  E                  
Sbjct: 65   TTSTSTTTPTKNQSQDEQEDSRDNNQE--SEDHNL-ALETVEPGSGSSSRRPRGRPPGSK 121

Query: 1089 XXXP--IVITKENPNALRSHVLEISNGSDVVECIVTFSQRRHCGVSVLSGNGIVNNVTLR 916
                  IV+TKE+PNALRSHVLEIS+G+D+V  I  F+QRRH GVS+LSG+GIV NVTLR
Sbjct: 122  NKLKPPIVVTKESPNALRSHVLEISSGTDIVGSISNFAQRRHRGVSILSGSGIVTNVTLR 181

Query: 915  QPAAPGGIITLQGRFEIXXXXXXXXXXXXXXXXXXLTVYLAXXXXXXXXXXXXXXXVASG 736
            QPAAPGG+ITL GRFEI                  LTVYLA               VA+G
Sbjct: 182  QPAAPGGVITLHGRFEILSLLGSFLPPPSPPGATTLTVYLAGGQGQVVGGTVMGQLVAAG 241

Query: 735  PVMVIAATFTNATYXXXXXXXXXXXXXXXGMQLQATXXXXXXXXXXXXXXXXAQSHGDQA 556
            PVMVIAATFTNAT+                 Q+ +                   + G Q+
Sbjct: 242  PVMVIAATFTNATFERLPLEEQEQEGMQLQQQVTSGTNNSNTAGGGSSGGGDGNNSGSQS 301

Query: 555  AAS-----SMPIYXXXXXXXXNGQMHHDVFW 478
            + +     SMP+Y        NGQM H+VFW
Sbjct: 302  SQAMAEHGSMPVYNLPPNLLPNGQMPHEVFW 332


>emb|CBI31637.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  161 bits (408), Expect = 3e-37
 Identities = 112/266 (42%), Positives = 130/266 (48%)
 Frame = -3

Query: 1272 NSSGSNPNTNSANQNREEDGNGQDNEQQELAEDHNVGALEIYEXXXXXXXXXXXXXXXXX 1093
            N++ +  NT + N N E++  G      E+AE  + G                       
Sbjct: 51   NNTTTTTNTTATNSNSEQNAGGH-----EIAEPSSAGR-----------RPRGRPPGSKN 94

Query: 1092 XXXXPIVITKENPNALRSHVLEISNGSDVVECIVTFSQRRHCGVSVLSGNGIVNNVTLRQ 913
                PIVITKE+PNALRSHVLEIS+GSD+ E I  F+QRRH GVSVLS +GIVNNVTLRQ
Sbjct: 95   KPKPPIVITKESPNALRSHVLEISSGSDIAESIANFAQRRHRGVSVLSASGIVNNVTLRQ 154

Query: 912  PAAPGGIITLQGRFEIXXXXXXXXXXXXXXXXXXLTVYLAXXXXXXXXXXXXXXXVASGP 733
            PAAPGG+ITLQGRFEI                  LTVYLA               +ASGP
Sbjct: 155  PAAPGGVITLQGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGSVVGALMASGP 214

Query: 732  VMVIAATFTNATYXXXXXXXXXXXXXXXGMQLQATXXXXXXXXXXXXXXXXAQSHGDQAA 553
            V+VIAATF+NAT+                 Q                     QSHG    
Sbjct: 215  VIVIAATFSNATFERLPLEDEPANEGIQMPQTSGV-------NSGTGGTSAPQSHG-LVD 266

Query: 552  ASSMPIYXXXXXXXXNGQMHHDVFWA 475
             SSMPIY        NGQM HDVFWA
Sbjct: 267  PSSMPIYNLPPNLLPNGQMPHDVFWA 292


>gb|ABL63121.1| AT-hook DNA-binding protein [Catharanthus roseus]
          Length = 302

 Score =  159 bits (403), Expect = 1e-36
 Identities = 100/201 (49%), Positives = 112/201 (55%), Gaps = 8/201 (3%)
 Frame = -3

Query: 1272 NSSGSNPNT--------NSANQNREEDGNGQDNEQQELAEDHNVGALEIYEXXXXXXXXX 1117
            NSSGSN N         N+ +QN EE+         +LAE +                  
Sbjct: 31   NSSGSNTNNHHHHHRNPNNTSQNPEEEEENPHERDLQLAEHNQTPEAAGGSGGSSGRRPR 90

Query: 1116 XXXXXXXXXXXXPIVITKENPNALRSHVLEISNGSDVVECIVTFSQRRHCGVSVLSGNGI 937
                        PI+ITKE+PNALRSHVLEISNGSDVVECI TF+ RRH GVSVLSG+GI
Sbjct: 91   GRPPGSKNKPKPPIIITKESPNALRSHVLEISNGSDVVECISTFALRRHRGVSVLSGSGI 150

Query: 936  VNNVTLRQPAAPGGIITLQGRFEIXXXXXXXXXXXXXXXXXXLTVYLAXXXXXXXXXXXX 757
            VNNV+LRQPAAPGG++TL GRFEI                  LTVYLA            
Sbjct: 151  VNNVSLRQPAAPGGVVTLHGRFEILSLSGSFLPAPSPPGATGLTVYLAGGQGQVVGGTVV 210

Query: 756  XXXVASGPVMVIAATFTNATY 694
               VASGPVMVIAATFTNATY
Sbjct: 211  GSLVASGPVMVIAATFTNATY 231


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