BLASTX nr result

ID: Panax21_contig00015881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015881
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278075.2| PREDICTED: RNA polymerase II-associated fact...   104   1e-20
emb|CBI36059.3| unnamed protein product [Vitis vinifera]              104   1e-20
ref|XP_002515964.1| conserved hypothetical protein [Ricinus comm...    90   3e-16
ref|XP_004155995.1| PREDICTED: uncharacterized LOC101203806 [Cuc...    88   9e-16
ref|XP_004141783.1| PREDICTED: uncharacterized protein LOC101203...    87   2e-15

>ref|XP_002278075.2| PREDICTED: RNA polymerase II-associated factor 1 homolog [Vitis
           vinifera]
          Length = 589

 Score =  104 bits (260), Expect = 1e-20
 Identities = 60/110 (54%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
 Frame = +2

Query: 2   TTYLVAFNESEARYAPLPTKLVLRKKRAREGKSSDEVEHFXXXXXXXXXXXXXXSAVELK 181
           TTYLV+FN+++ARY PLPTKL+LRKKRA+EG+SSDEVEHF              +A+ELK
Sbjct: 481 TTYLVSFNKTDARYLPLPTKLLLRKKRAKEGRSSDEVEHFPVPSKVTVRQRPNVAAIELK 540

Query: 182 ETRGYSDVRASVSASKRQRVDNGSPL-RQRKVMQDTDIDQSSGAEYDMSD 328
           +   YS  +  VS+SKR  VD    L R  K +QD  +DQSSGAE +MSD
Sbjct: 541 DEEVYSSSKRGVSSSKR-GVDMEDGLGRSYKGVQDQHMDQSSGAEDEMSD 589


>emb|CBI36059.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  104 bits (260), Expect = 1e-20
 Identities = 60/110 (54%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
 Frame = +2

Query: 2   TTYLVAFNESEARYAPLPTKLVLRKKRAREGKSSDEVEHFXXXXXXXXXXXXXXSAVELK 181
           TTYLV+FN+++ARY PLPTKL+LRKKRA+EG+SSDEVEHF              +A+ELK
Sbjct: 312 TTYLVSFNKTDARYLPLPTKLLLRKKRAKEGRSSDEVEHFPVPSKVTVRQRPNVAAIELK 371

Query: 182 ETRGYSDVRASVSASKRQRVDNGSPL-RQRKVMQDTDIDQSSGAEYDMSD 328
           +   YS  +  VS+SKR  VD    L R  K +QD  +DQSSGAE +MSD
Sbjct: 372 DEEVYSSSKRGVSSSKR-GVDMEDGLGRSYKGVQDQHMDQSSGAEDEMSD 420


>ref|XP_002515964.1| conserved hypothetical protein [Ricinus communis]
           gi|223544869|gb|EEF46384.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 672

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 50/110 (45%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
 Frame = +2

Query: 2   TTYLVAFNESEARYAPLPTKLVLRKKRAREGKSSDEVEHFXXXXXXXXXXXXXXSAVELK 181
           TT+LV+F+E  ARY PLPTK+ LRKKRAREG+S DEVEHF              +A EL+
Sbjct: 563 TTFLVSFDEDAARYVPLPTKINLRKKRAREGRSGDEVEHFPAPSSVTVRRRPTAAARELR 622

Query: 182 ETRGYSDVRASVSASKRQRVDNGSPL-RQRKVMQDTDIDQSSGAEYDMSD 328
           ++ G S  R ++  S+    D+   L R  +V +D D+D SS AE D+S+
Sbjct: 623 DSAGASSSRGNILDSRMGTGDDDDGLGRVHRVARDDDLDHSSEAEDDLSE 672


>ref|XP_004155995.1| PREDICTED: uncharacterized LOC101203806 [Cucumis sativus]
          Length = 706

 Score = 88.2 bits (217), Expect = 9e-16
 Identities = 52/109 (47%), Positives = 67/109 (61%)
 Frame = +2

Query: 2   TTYLVAFNESEARYAPLPTKLVLRKKRAREGKSSDEVEHFXXXXXXXXXXXXXXSAVELK 181
           TTYLV+F+++EARY PLPTKLVLRKKRA+EG+SSDEVEHF              + +E+K
Sbjct: 605 TTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLEVK 664

Query: 182 ETRGYSDVRASVSASKRQRVDNGSPLRQRKVMQDTDIDQSSGAEYDMSD 328
           +   YS+       SKR         R  K  ++ D+DQ SGAE +MSD
Sbjct: 665 DPGIYSN-------SKRGSDIEDGIGRSHKHDRNQDMDQFSGAEDEMSD 706


>ref|XP_004141783.1| PREDICTED: uncharacterized protein LOC101203806 [Cucumis sativus]
          Length = 706

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 52/109 (47%), Positives = 66/109 (60%)
 Frame = +2

Query: 2   TTYLVAFNESEARYAPLPTKLVLRKKRAREGKSSDEVEHFXXXXXXXXXXXXXXSAVELK 181
           TTYLV+F+++EARY PLPTKLVLRKKRA+EG+SSDEVEHF              + +E+K
Sbjct: 605 TTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLEVK 664

Query: 182 ETRGYSDVRASVSASKRQRVDNGSPLRQRKVMQDTDIDQSSGAEYDMSD 328
           +   YS+       SKR         R  K  +  D+DQ SGAE +MSD
Sbjct: 665 DPGIYSN-------SKRGSDIEDGIGRSHKHDRHQDMDQFSGAEDEMSD 706


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