BLASTX nr result

ID: Panax21_contig00015863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015863
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518715.1| leucine-rich repeat-containing protein, puta...   146   2e-33
ref|XP_002269054.2| PREDICTED: TMV resistance protein N-like [Vi...   142   2e-32
ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vi...   140   1e-31
ref|XP_002329169.1| tir-nbs-lrr resistance protein [Populus tric...   140   1e-31
ref|XP_002518711.1| leucine-rich repeat containing protein, puta...   137   7e-31

>ref|XP_002518715.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223542096|gb|EEF43640.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1094

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/157 (45%), Positives = 107/157 (68%)
 Frame = -1

Query: 478 CMEKKKMIVIPVFYHVNPSDVRYQNKTFAQSFAKHETSHRFASEKVKTWRAALRKVGDMS 299
           CM+ +  +VIPVFY V+PS VR Q  +F   FA+HE S   + EKV++WRAAL++V ++S
Sbjct: 103 CMKNRGQMVIPVFYRVDPSHVRNQTGSFEDVFARHEESLSVSKEKVQSWRAALKEVANLS 162

Query: 298 GVHVQGTRYESEVITEIVRRIFKDLQDTLPRDATKGLVGIESRVKDLKSLLNMDSNDIRF 119
           G H   TR E+E + EI+  I K L    P   ++GLVG+ESR+++++SLL + S+++R 
Sbjct: 163 GWHSTSTRPEAEAVKEIIEVIVKKLNQMSPNCYSRGLVGMESRIQEIESLLCLRSSNVRI 222

Query: 118 IGICGMSGMGKTTLAEVVYEGIRNQFQGYSFIGNIKD 8
           +GI GM G+GKTTLA  +Y+ I  QF+   F+ N ++
Sbjct: 223 VGIWGMGGLGKTTLARAIYDRIAPQFEICYFLSNARE 259


>ref|XP_002269054.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1695

 Score =  142 bits (359), Expect = 2e-32
 Identities = 73/162 (45%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
 Frame = -1

Query: 478 CMEKKKMIVIPVFYHVNPSDVRYQNKTFAQSFAKHETSHRFAS-EKVKTWRAALRKVGDM 302
           CM ++K IV+PVFYHV+PS VR Q  ++ ++FA HE        EK++ WR AL +  ++
Sbjct: 94  CMTERKQIVLPVFYHVDPSHVRKQMGSYGEAFADHEKDADLKKREKIQKWRTALTETSNL 153

Query: 301 SGVHVQGTRYESEVITEIVRRIFKDLQDTLPRD--ATKGLVGIESRVKDLKSLLNMDSND 128
           SG H++  + ES VI EI  +I   L    PR     K +VG+  R++ L SL+N+DSND
Sbjct: 154 SGWHLRDNQSESNVIKEITDKIITRLN---PRSLYVGKNIVGMNIRLEKLISLINIDSND 210

Query: 127 IRFIGICGMSGMGKTTLAEVVYEGIRNQFQGYSFIGNIKDIS 2
           + F+GICG+ G+GKTT+A+ +Y  I NQFQG SF+ N+++ S
Sbjct: 211 VCFVGICGLGGIGKTTIAKALYNKISNQFQGASFLANVRENS 252


>ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1162

 Score =  140 bits (352), Expect = 1e-31
 Identities = 75/159 (47%), Positives = 110/159 (69%)
 Frame = -1

Query: 478 CMEKKKMIVIPVFYHVNPSDVRYQNKTFAQSFAKHETSHRFASEKVKTWRAALRKVGDMS 299
           C++      +PVFY++NPS V+ Q  +FA++FAKHE  +R   EKV  WR AL +V  +S
Sbjct: 102 CIKVMGHRALPVFYNLNPSHVKKQTGSFAEAFAKHEQEYREKMEKVVKWREALTEVATIS 161

Query: 298 GVHVQGTRYESEVITEIVRRIFKDLQDTLPRDATKGLVGIESRVKDLKSLLNMDSNDIRF 119
           G   +  R+ES++I EIVR I+  L  T P    KGLVG+ESR++ + SLL+M S+D+R 
Sbjct: 162 GWDSRD-RHESKLIEEIVRDIWNKLVGTSP-SYMKGLVGMESRLEAMDSLLSMFSDDVRM 219

Query: 118 IGICGMSGMGKTTLAEVVYEGIRNQFQGYSFIGNIKDIS 2
           +GI GM+G+GKTT+A+V+YE I  QF+G  F+ N+++ S
Sbjct: 220 VGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREES 258


>ref|XP_002329169.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222870950|gb|EEF08081.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1125

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/157 (42%), Positives = 102/157 (64%)
 Frame = -1

Query: 478 CMEKKKMIVIPVFYHVNPSDVRYQNKTFAQSFAKHETSHRFASEKVKTWRAALRKVGDMS 299
           C + K  +VIPVFY V+PS VR Q  +FA +FA+H+   +   EKV  WRAA+R+  ++S
Sbjct: 95  CKKVKGQMVIPVFYRVDPSHVRNQTGSFADAFARHDQLLKEKMEKVLNWRAAMREAANLS 154

Query: 298 GVHVQGTRYESEVITEIVRRIFKDLQDTLPRDATKGLVGIESRVKDLKSLLNMDSNDIRF 119
           G      + ESE + +IVR I   L  T        L+GI++R+K +++LL M+S D+R 
Sbjct: 155 GWDSHNIKSESEFVDDIVRDILNKLHQTSMSTHHTSLIGIDARIKKVETLLKMESQDVRI 214

Query: 118 IGICGMSGMGKTTLAEVVYEGIRNQFQGYSFIGNIKD 8
           +GI GM G+GKTT+A+ VY+ +  QF+G+ F+ N+++
Sbjct: 215 VGIWGMGGIGKTTIAKAVYDNVSAQFEGFLFVANVRE 251


>ref|XP_002518711.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223542092|gb|EEF43636.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1109

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/157 (43%), Positives = 105/157 (66%)
 Frame = -1

Query: 478 CMEKKKMIVIPVFYHVNPSDVRYQNKTFAQSFAKHETSHRFASEKVKTWRAALRKVGDMS 299
           CM+    +VIPVFY V+PS VR Q  +FA +FA+HE S     +KVK+WRAAL+ V ++S
Sbjct: 103 CMKINGQMVIPVFYKVDPSHVRNQTGSFADAFARHEESLLVTEDKVKSWRAALKDVANIS 162

Query: 298 GVHVQGTRYESEVITEIVRRIFKDLQDTLPRDATKGLVGIESRVKDLKSLLNMDSNDIRF 119
           G   + T  ESE+I +I+R I++ L       + +G VGI++R+K ++ LL +  +D+R 
Sbjct: 163 GWDSRVTSPESELIKKIIRDIWEKLNIMSSSYSPRGFVGIQTRIKQIECLLCLKLSDVRI 222

Query: 118 IGICGMSGMGKTTLAEVVYEGIRNQFQGYSFIGNIKD 8
           +GI GM G+GKTTLA  +Y+ I +QF+   F+ NI++
Sbjct: 223 VGIWGMGGIGKTTLARAIYDKISHQFESSCFLSNIRE 259


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