BLASTX nr result

ID: Panax21_contig00015848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015848
         (1671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273083.1| PREDICTED: lysine-specific histone demethyla...   303   1e-79
ref|XP_002311993.1| hypothetical protein POPTRDRAFT_353344 [Popu...   300   1e-78
ref|XP_004140213.1| PREDICTED: lysine-specific histone demethyla...   293   9e-77
ref|XP_004158625.1| PREDICTED: LOW QUALITY PROTEIN: lysine-speci...   291   4e-76
ref|XP_002529596.1| amine oxidase, putative [Ricinus communis] g...   282   2e-73

>ref|XP_002273083.1| PREDICTED: lysine-specific histone demethylase 1 homolog 3-like
            [Vitis vinifera]
          Length = 992

 Score =  303 bits (775), Expect = 1e-79
 Identities = 176/309 (56%), Positives = 208/309 (67%), Gaps = 1/309 (0%)
 Frame = -3

Query: 1669 RLFFAGEATTRRYPATMHGAFLTGLREAENMTHYASNRALRTKVLRNPSKNTHSCACILA 1490
            RLFFAGEATTRRYPATMHGAFL+GLREA NM HYA+ R +R K+ R+PSKN HSCA +LA
Sbjct: 632  RLFFAGEATTRRYPATMHGAFLSGLREAANMAHYANARVIRIKIERSPSKNAHSCASLLA 691

Query: 1489 DLFREPDLEFGSFSVIYGRKNSDPKSTAILRVTLGAPRKKSNEGSRPDQQHSNKXXXXXX 1310
            DLFREPDLEFGSF+VI+G+KNSDPKS  ILRVT   PRK    GS+ DQ HSNK      
Sbjct: 692  DLFREPDLEFGSFAVIFGKKNSDPKSMVILRVTFTGPRK----GSKLDQNHSNKLLFQQL 747

Query: 1309 XXXXXXXXXFHVYTLLSRQQALELMDVRGGDEMRLNYLCEKLGVKLIGRKGLGSSADSVI 1130
                      H+YTLLSRQQALEL +VRGGD+MRLN+LCEKLGVKL+ RKGLG SADSVI
Sbjct: 748  ESHFNHQQQLHIYTLLSRQQALELREVRGGDDMRLNFLCEKLGVKLVARKGLGPSADSVI 807

Query: 1129 ASIKAERGNXXXXXXXXXLKSGASKQKPSTLKQKLIRKAKVLGNSNGSTPPNRAVGIKIV 950
            ASIKAERGN         LKSG  K K +  K+K++RKAKV+ N  G  P N       +
Sbjct: 808  ASIKAERGNRKPASTSLALKSG-MKPKAAGSKRKVVRKAKVVSNVGGLMPRN-----SNM 861

Query: 949  DHGIVSSTPSSFSFEAKAVGNVNNSAPLPNYDNGTKVAFSTSGPTP-VNIHEDSISGLTP 773
             +G  S  PS+       V N + S P PN + G     + SG  P  N++  + SGL P
Sbjct: 862  RNGNSSIPPSNL-----IVRNGSGSTPPPNLNMG-----NGSGLVPRPNLNMGNGSGLVP 911

Query: 772  ASSLDMVIG 746
            +S+L+M  G
Sbjct: 912  SSNLNMTSG 920


>ref|XP_002311993.1| hypothetical protein POPTRDRAFT_353344 [Populus trichocarpa]
            gi|222851813|gb|EEE89360.1| hypothetical protein
            POPTRDRAFT_353344 [Populus trichocarpa]
          Length = 811

 Score =  300 bits (767), Expect = 1e-78
 Identities = 156/233 (66%), Positives = 176/233 (75%), Gaps = 1/233 (0%)
 Frame = -3

Query: 1669 RLFFAGEATTRRYPATMHGAFLTGLREAENMTHYASNRALRTKVLRNPSKNTHSCACILA 1490
            RLFFAGEAT RRYPATMHGAFL+GLREA N+ HYA  RALR KV ++PS N H+CA +LA
Sbjct: 453  RLFFAGEATMRRYPATMHGAFLSGLREAANIAHYAGARALRVKVNQSPSNNAHACASLLA 512

Query: 1489 DLFREPDLEFGSFSVIYGRKNSDPKSTAILRVTLGAPRKKSNEGSRPDQQHSNKXXXXXX 1310
            DLFREPD+EFGSFSVI+GR N D KSTAILRVT   PRKKS E SRPDQ HSNK      
Sbjct: 513  DLFREPDIEFGSFSVIFGRNNPDLKSTAILRVTFNEPRKKSQESSRPDQHHSNKLLFQQL 572

Query: 1309 XXXXXXXXXFHVYTLLSRQQALELMDVRGGDEMRLNYLCEKLGVKLIGRKGLGSSADSVI 1130
                      HVYTLLS+QQ LEL +VRGGDEMR+NYLCEKLGVKLIGRKGLG +ADS+I
Sbjct: 573  QSHFNQQQPLHVYTLLSKQQVLELREVRGGDEMRMNYLCEKLGVKLIGRKGLGPTADSLI 632

Query: 1129 ASIKAERGNXXXXXXXXXLKSGASKQKPSTLKQKLIRKAKVLGNSNGSTP-PN 974
            ASIKAERG          LKSG SK +  TLK+KL+R+AK++ +SN   P PN
Sbjct: 633  ASIKAERGGRKASATSLGLKSGMSKLQKGTLKRKLVRRAKIVRSSNKPAPLPN 685


>ref|XP_004140213.1| PREDICTED: lysine-specific histone demethylase 1 homolog 3-like
            [Cucumis sativus]
          Length = 982

 Score =  293 bits (750), Expect = 9e-77
 Identities = 152/229 (66%), Positives = 177/229 (77%), Gaps = 4/229 (1%)
 Frame = -3

Query: 1669 RLFFAGEATTRRYPATMHGAFLTGLREAENMTHYASNRALRTKVLRNPSKNTHSCACILA 1490
            RLFFAGEATTRRYPATMHGAFL+GLREA NM +YA+ RAL+ K+ R PSKN HSCAC+LA
Sbjct: 642  RLFFAGEATTRRYPATMHGAFLSGLREAANMANYANARALKLKIDRGPSKNAHSCACLLA 701

Query: 1489 DLFREPDLEFGSFSVIYGRKNSDPKSTAILRVTLGAPRKKSNEGSRPDQQHSNKXXXXXX 1310
            DLFREPDLEFGSFS+I+GRKN+DPKST ILRVT   P+KK++EGS  DQ+H+NK      
Sbjct: 702  DLFREPDLEFGSFSIIFGRKNADPKSTVILRVTFNDPQKKNHEGSNSDQRHTNKLLFQQL 761

Query: 1309 XXXXXXXXXFHVYTLLSRQQALELMDVRGGDEMRLNYLCEKLGVKLIGRKGLGSSADSVI 1130
                      HVYTLLSRQQALEL +VRGGDEMRLNYLCEKLGV+L+GRKGLG +ADSVI
Sbjct: 762  QSHFSQQQQLHVYTLLSRQQALELREVRGGDEMRLNYLCEKLGVRLVGRKGLGPNADSVI 821

Query: 1129 ASIKAERGNXXXXXXXXXLKS----GASKQKPSTLKQKLIRKAKVLGNS 995
            ASI+AERGN         LKS    G SK K S+ +   +R+AK++ NS
Sbjct: 822  ASIRAERGNKKPSSTYLALKSGELKGTSKMKTSSTR-NAVRRAKIVRNS 869


>ref|XP_004158625.1| PREDICTED: LOW QUALITY PROTEIN: lysine-specific histone demethylase 1
            homolog 3-like [Cucumis sativus]
          Length = 982

 Score =  291 bits (745), Expect = 4e-76
 Identities = 151/229 (65%), Positives = 176/229 (76%), Gaps = 4/229 (1%)
 Frame = -3

Query: 1669 RLFFAGEATTRRYPATMHGAFLTGLREAENMTHYASNRALRTKVLRNPSKNTHSCACILA 1490
            RLFFAGEATTRRYPATMHGAFL+GLREA NM +YA+ RAL+ K+ R PSKN HSCAC+LA
Sbjct: 642  RLFFAGEATTRRYPATMHGAFLSGLREAANMANYANARALKLKIDRGPSKNAHSCACLLA 701

Query: 1489 DLFREPDLEFGSFSVIYGRKNSDPKSTAILRVTLGAPRKKSNEGSRPDQQHSNKXXXXXX 1310
            DLFREPDLEFGSFS+ +GRKN+DPKST ILRVT   P+KK++EGS  DQ+H+NK      
Sbjct: 702  DLFREPDLEFGSFSIXFGRKNADPKSTVILRVTFNDPQKKNHEGSNSDQRHTNKLLFQQL 761

Query: 1309 XXXXXXXXXFHVYTLLSRQQALELMDVRGGDEMRLNYLCEKLGVKLIGRKGLGSSADSVI 1130
                      HVYTLLSRQQALEL +VRGGDEMRLNYLCEKLGV+L+GRKGLG +ADSVI
Sbjct: 762  QSHFSQQQQLHVYTLLSRQQALELREVRGGDEMRLNYLCEKLGVRLVGRKGLGPNADSVI 821

Query: 1129 ASIKAERGNXXXXXXXXXLKS----GASKQKPSTLKQKLIRKAKVLGNS 995
            ASI+AERGN         LKS    G SK K S+ +   +R+AK++ NS
Sbjct: 822  ASIRAERGNKKPSSTYLALKSGELKGTSKMKTSSTR-NAVRRAKIVRNS 869


>ref|XP_002529596.1| amine oxidase, putative [Ricinus communis]
            gi|223530929|gb|EEF32788.1| amine oxidase, putative
            [Ricinus communis]
          Length = 961

 Score =  282 bits (721), Expect = 2e-73
 Identities = 152/246 (61%), Positives = 173/246 (70%), Gaps = 15/246 (6%)
 Frame = -3

Query: 1669 RLFFAGEATTRRYPATMHGAFLTGLREAENMTHYASNRALRTKVLRNPSKNTHSCACILA 1490
            RLFFAGEATTRRYPATMHGAFL+GLREA N+ HYAS R LR K+ R+PSKN ++ A +L 
Sbjct: 631  RLFFAGEATTRRYPATMHGAFLSGLREAANIAHYASARTLRMKISRSPSKNVYNYASLLT 690

Query: 1489 DLFREPDLEFGSFSVIYGRKNSDPKSTAILRVTLGAPRKKSNEGSRPDQQHSNKXXXXXX 1310
            D FREPDLEFGSF VI+ RK++DPKS AILRVT   PRKKS EG  P+QQHSNK      
Sbjct: 691  DFFREPDLEFGSFCVIFSRKDADPKSPAILRVTFNEPRKKSQEGCGPEQQHSNKLLFQQL 750

Query: 1309 XXXXXXXXXFHVYTLLSRQQALELMDVRGGDEMRLNYLCEKLGVKLIGRKGLGSSADSVI 1130
                      HVYTLLS+QQA EL +VRGGDEMRLNYLCEKLGVK++GRKGLG +AD +I
Sbjct: 751  QSHFNQQQQLHVYTLLSKQQAFELREVRGGDEMRLNYLCEKLGVKMVGRKGLGPAADFLI 810

Query: 1129 ASIKAERGNXXXXXXXXXLK----SGASKQKPSTLKQKLIR-----------KAKVLGNS 995
            A+IKAERG+         LK     G SK K  TLKQKLIR           +AKV+ NS
Sbjct: 811  AAIKAERGSRKATSNSLALKVGTLKGTSKLKAGTLKQKLIRHVLNPYISLFMRAKVVSNS 870

Query: 994  NGSTPP 977
            N   PP
Sbjct: 871  NRLVPP 876


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