BLASTX nr result

ID: Panax21_contig00015840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015840
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_01682799.1| fatty oxidation complex alpha subunit [Vibrio...   104   9e-21
emb|CAB82966.1| putative protein [Arabidopsis thaliana]                97   2e-18
emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]    95   5e-18
gb|AAG51228.1|AC035249_3 Tam3-like transposon protein; 93317-954...    89   4e-16
ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16

>ref|ZP_01682799.1| fatty oxidation complex alpha subunit [Vibrio cholerae V52]
           gi|121627762|gb|EAX60388.1| fatty oxidation complex
           alpha subunit [Vibrio cholerae V52]
          Length = 275

 Score =  104 bits (259), Expect = 9e-21
 Identities = 65/157 (41%), Positives = 90/157 (57%), Gaps = 8/157 (5%)
 Frame = +3

Query: 6   KYWGNVEKMNKLLYIAVVLDPRHKFAFVEFAFKSM*GSETEMANKMIKSVCDA-IEELFK 182
           KYWG  EKMNK+L+IA VLDPR+KF +V FA + + G E     K++ +  +A +++LF 
Sbjct: 64  KYWGTPEKMNKMLFIASVLDPRNKFVYVNFALEELLGEEK---GKIVNNEVEAYLKKLFA 120

Query: 183 WYSLKYA----SQGAQSTVSSESFDVHG*DRLRRRLSEKFVEHIVDVQGGD---NTELDK 341
            Y  KYA    +Q + S +S  S      +     L  KF         G     +ELD+
Sbjct: 121 IYVSKYAKGSKNQPSSSDLSDSSTCGLSQNVKTNSLRTKFYMKKQKEDSGSLGVKSELDR 180

Query: 342 YLSEHVDQTTSKYNILGWWKNNSPRFPILSQMARDVL 452
           YL E  +  +  ++IL WWK NSPRFP+LSQ+ARDVL
Sbjct: 181 YLLEDQEPESEDFDILIWWKVNSPRFPVLSQLARDVL 217


>emb|CAB82966.1| putative protein [Arabidopsis thaliana]
          Length = 705

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 15/165 (9%)
 Frame = +3

Query: 3   DKYWGNVEKMNKLLYIAVVLDPRHKFAFVEFAFKSM*GSETEMANKMIKSVCDAIEELFK 182
           DKYW   EK+NK+L +A VLDPR K  F  F+F+ + G       +M + V D +E+LF 
Sbjct: 459 DKYWEGTEKINKILIVAGVLDPRRKMVFTMFSFELIYGKGNPKCVEMKELVMDVLEKLFD 518

Query: 183 WYSLKYASQGAQSTVSSESFDVHG*DRLRRRLSEKFVEHIVD----------VQGGDNTE 332
            YS++YA+   Q +VS ++ +V    ++ +      V++I D                 E
Sbjct: 519 IYSVRYATSNLQPSVSCDAENV---TQVHQDFENMEVDNIDDPFLKFMVAKKTSVAVVNE 575

Query: 333 LDKYLSEHVDQTTSK-----YNILGWWKNNSPRFPILSQMARDVL 452
           L KYL + +  TT       +++L WWK NS ++PI+S MAR+VL
Sbjct: 576 LVKYLKDELHVTTENSLGLPFDLLDWWKTNSSKYPIMSLMAREVL 620


>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 61/160 (38%), Positives = 88/160 (55%), Gaps = 10/160 (6%)
 Frame = +3

Query: 3   DKYWGNVEKMNKLLYIAVVLDPRHKFAFVEFAFKSM*GSETEMANKMIKSVCDAIEELFK 182
           DKYWGN+++ N LLY+ VVLDPR+K  FV+F F  +   + E+A  M   V D + +L+ 
Sbjct: 338 DKYWGNLKRSNLLLYVVVVLDPRYKLKFVQFCFDQL--YDKEVAKDMSTRVVDVLRKLYD 395

Query: 183 WYSLKY----------ASQGAQSTVSSESFDVHG*DRLRRRLSEKFVEHIVDVQGGDNTE 332
            Y L Y           SQ  +S +  E  D++      R L E   EH V+      +E
Sbjct: 396 EYRLLYFHNEVCDLEEFSQPKESEL-GEQDDLNFVYTFTRHLYE---EHNVE----SKSE 447

Query: 333 LDKYLSEHVDQTTSKYNILGWWKNNSPRFPILSQMARDVL 452
           LD YLSE  ++    ++IL WWK N  +F +L+Q+A+DVL
Sbjct: 448 LDWYLSESNERVDDGFDILHWWKVNCSKFKVLAQIAKDVL 487


>gb|AAG51228.1|AC035249_3 Tam3-like transposon protein; 93317-95488 [Arabidopsis thaliana]
           gi|12323055|gb|AAG51515.1|AC068324_3 hAT-element
           transposase, putative [Arabidopsis thaliana]
          Length = 723

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
 Frame = +3

Query: 3   DKYWGNVEKMNKLLYIAVVLDPRHKFAFVEFAFKSM*GSETEMANKMIKSVCDAIEELFK 182
           DKYW   + +N++L IA V DPR K  F +  F+ + G +T  A +M  SV D ++ + K
Sbjct: 479 DKYWDGQKNINRMLIIASVFDPRQKMEFAKMCFEKLYGVDTSEAKEMYNSVYDVMKAMLK 538

Query: 183 WYSLKYASQGAQSTVSSESFDVHG*DRLR-----------RRLSEKFVEHIVDVQGGD-N 326
            Y++ +     QS+ S+        D               R+   + E + +++  D  
Sbjct: 539 EYTVIFKGPNTQSSQSNPPSSTAARDTFACELAEDSNVEFERMDRSYKEMVNEIRVTDPK 598

Query: 327 TELDKYLSEHVDQTTS----KYNILGWWKNNSPRFPILSQMARDVL 452
            ELD YL   V+   +    ++++L WW+ NS ++P+LS++ARDVL
Sbjct: 599 DELDIYLKAEVENPKTLPGMEWDVLSWWRLNSQKYPVLSEIARDVL 644


>ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|222873882|gb|EEF11013.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 59/151 (39%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
 Frame = +3

Query: 3   DKYWGNVEKMNKLLYIAVVLDPRHKFAFVEFAFKSM*GSETEMANKMIKSVCDAIEELFK 182
           D+YW    K +  L +A +LDPR K   VE+ +  + GS    A   IK V D I+ELF 
Sbjct: 468 DRYWS---KCSLALAVAAILDPRFKMKLVEYYYSQIYGST---ALDRIKEVSDGIKELFN 521

Query: 183 WYSLKYASQGAQSTVSSESFDVHG*D-RLRRRLSEKFVEHIVDVQGGDNTELDKYLSEHV 359
            YS+        ST+   S      D R R +  +KF+      Q   + +LDKYL E V
Sbjct: 522 AYSICSTLVDQGSTLPGSSLPSTSTDSRDRLKGFDKFLHESSQGQSAIS-DLDKYLEEPV 580

Query: 360 DQTTSKYNILGWWKNNSPRFPILSQMARDVL 452
                 +NIL WWK ++PR+PILS MARD+L
Sbjct: 581 FPRNCDFNILNWWKVHTPRYPILSMMARDIL 611


Top