BLASTX nr result
ID: Panax21_contig00015836
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00015836 (1365 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot... 113 1e-22 emb|CBI32424.3| unnamed protein product [Vitis vinifera] 113 1e-22 ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot... 113 1e-22 gb|AFW73577.1| hypothetical protein ZEAMMB73_198499 [Zea mays] 111 5e-22 dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thali... 110 7e-22 >ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis vinifera] Length = 934 Score = 113 bits (283), Expect = 1e-22 Identities = 75/161 (46%), Positives = 87/161 (54%) Frame = +1 Query: 1 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAASLEGWAEKESLYLLIF*HWYH*RKGF 180 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA + +K+ +Y+ F Sbjct: 612 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRF---------- 661 Query: 181 DVTFK*WLYCTE*SS*FSLVSLMNQFNFL*VYQCQMSKEGLKNVIQKEQTDSKNQVCESL 360 S ++ + V+Q QMSKEGL+ VIQ+EQ DS Sbjct: 662 ----------------LSTGTIEEK-----VFQRQMSKEGLQKVIQQEQKDS-------- 692 Query: 361 LSSHHVIDIALKA**QVFYLQGNFLSIEDLRDLFTFHENVR 483 LK QGNFLS EDLRDLF+FHENVR Sbjct: 693 ----------LKT-------QGNFLSTEDLRDLFSFHENVR 716 >emb|CBI32424.3| unnamed protein product [Vitis vinifera] Length = 1112 Score = 113 bits (283), Expect = 1e-22 Identities = 75/161 (46%), Positives = 87/161 (54%) Frame = +1 Query: 1 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAASLEGWAEKESLYLLIF*HWYH*RKGF 180 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA + +K+ +Y+ F Sbjct: 790 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRF---------- 839 Query: 181 DVTFK*WLYCTE*SS*FSLVSLMNQFNFL*VYQCQMSKEGLKNVIQKEQTDSKNQVCESL 360 S ++ + V+Q QMSKEGL+ VIQ+EQ DS Sbjct: 840 ----------------LSTGTIEEK-----VFQRQMSKEGLQKVIQQEQKDS-------- 870 Query: 361 LSSHHVIDIALKA**QVFYLQGNFLSIEDLRDLFTFHENVR 483 LK QGNFLS EDLRDLF+FHENVR Sbjct: 871 ----------LKT-------QGNFLSTEDLRDLFSFHENVR 894 >ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine max] Length = 894 Score = 113 bits (282), Expect = 1e-22 Identities = 72/161 (44%), Positives = 85/161 (52%) Frame = +1 Query: 1 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAASLEGWAEKESLYLLIF*HWYH*RKGF 180 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA + +K+ +Y+ F Sbjct: 602 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRF---------- 651 Query: 181 DVTFK*WLYCTE*SS*FSLVSLMNQFNFL*VYQCQMSKEGLKNVIQKEQTDSKNQVCESL 360 S ++ + VYQ QMSKEGL+ VIQ+EQTDS Sbjct: 652 ----------------LSAGTIEEK-----VYQRQMSKEGLQKVIQQEQTDS-------- 682 Query: 361 LSSHHVIDIALKA**QVFYLQGNFLSIEDLRDLFTFHENVR 483 QGN LS E+LRDLFTFHEN++ Sbjct: 683 -----------------LVAQGNLLSTENLRDLFTFHENIK 706 >gb|AFW73577.1| hypothetical protein ZEAMMB73_198499 [Zea mays] Length = 392 Score = 111 bits (277), Expect = 5e-22 Identities = 71/161 (44%), Positives = 85/161 (52%) Frame = +1 Query: 1 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAASLEGWAEKESLYLLIF*HWYH*RKGF 180 SSKAGGCGLNL+GGNRLVLFDPDWNPANDKQAAA + +K+ +Y+ F Sbjct: 83 SSKAGGCGLNLVGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRF---------- 132 Query: 181 DVTFK*WLYCTE*SS*FSLVSLMNQFNFL*VYQCQMSKEGLKNVIQKEQTDSKNQVCESL 360 S ++ + VYQ QMSKEGL+ VIQ+EQ D+K Sbjct: 133 ----------------LSTGTIEEK-----VYQRQMSKEGLQKVIQQEQADNK------- 164 Query: 361 LSSHHVIDIALKA**QVFYLQGNFLSIEDLRDLFTFHENVR 483 +QGN LS EDLRDLF FHE+VR Sbjct: 165 -------------------MQGNSLSTEDLRDLFIFHEHVR 186 >dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana] Length = 959 Score = 110 bits (276), Expect = 7e-22 Identities = 72/166 (43%), Positives = 87/166 (52%) Frame = +1 Query: 1 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAASLEGWAEKESLYLLIF*HWYH*RKGF 180 SSKAGGCGLNLIG NRLVLFDPDWNPANDKQAAA + +K+ +Y+ F Sbjct: 610 SSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRF---------- 659 Query: 181 DVTFK*WLYCTE*SS*FSLVSLMNQFNFL*VYQCQMSKEGLKNVIQKEQTDSKNQVCESL 360 S ++ + VYQ QMSKEGL+ VIQ EQTD+ + Sbjct: 660 ----------------LSTGTIEEK-----VYQRQMSKEGLQKVIQHEQTDNSTR----- 693 Query: 361 LSSHHVIDIALKA**QVFYLQGNFLSIEDLRDLFTFHENVRHVYPL 498 QGN LS EDLRDLF+FH +VR+V+ L Sbjct: 694 --------------------QGNLLSTEDLRDLFSFHGDVRYVFLL 719