BLASTX nr result

ID: Panax21_contig00015836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015836
         (1365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   113   1e-22
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              113   1e-22
ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot...   113   1e-22
gb|AFW73577.1| hypothetical protein ZEAMMB73_198499 [Zea mays]        111   5e-22
dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thali...   110   7e-22

>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 934

 Score =  113 bits (283), Expect = 1e-22
 Identities = 75/161 (46%), Positives = 87/161 (54%)
 Frame = +1

Query: 1   SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAASLEGWAEKESLYLLIF*HWYH*RKGF 180
           SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA +    +K+ +Y+  F          
Sbjct: 612 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRF---------- 661

Query: 181 DVTFK*WLYCTE*SS*FSLVSLMNQFNFL*VYQCQMSKEGLKNVIQKEQTDSKNQVCESL 360
                            S  ++  +     V+Q QMSKEGL+ VIQ+EQ DS        
Sbjct: 662 ----------------LSTGTIEEK-----VFQRQMSKEGLQKVIQQEQKDS-------- 692

Query: 361 LSSHHVIDIALKA**QVFYLQGNFLSIEDLRDLFTFHENVR 483
                     LK        QGNFLS EDLRDLF+FHENVR
Sbjct: 693 ----------LKT-------QGNFLSTEDLRDLFSFHENVR 716


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  113 bits (283), Expect = 1e-22
 Identities = 75/161 (46%), Positives = 87/161 (54%)
 Frame = +1

Query: 1    SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAASLEGWAEKESLYLLIF*HWYH*RKGF 180
            SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA +    +K+ +Y+  F          
Sbjct: 790  SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRF---------- 839

Query: 181  DVTFK*WLYCTE*SS*FSLVSLMNQFNFL*VYQCQMSKEGLKNVIQKEQTDSKNQVCESL 360
                             S  ++  +     V+Q QMSKEGL+ VIQ+EQ DS        
Sbjct: 840  ----------------LSTGTIEEK-----VFQRQMSKEGLQKVIQQEQKDS-------- 870

Query: 361  LSSHHVIDIALKA**QVFYLQGNFLSIEDLRDLFTFHENVR 483
                      LK        QGNFLS EDLRDLF+FHENVR
Sbjct: 871  ----------LKT-------QGNFLSTEDLRDLFSFHENVR 894


>ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
           max]
          Length = 894

 Score =  113 bits (282), Expect = 1e-22
 Identities = 72/161 (44%), Positives = 85/161 (52%)
 Frame = +1

Query: 1   SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAASLEGWAEKESLYLLIF*HWYH*RKGF 180
           SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA +    +K+ +Y+  F          
Sbjct: 602 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRF---------- 651

Query: 181 DVTFK*WLYCTE*SS*FSLVSLMNQFNFL*VYQCQMSKEGLKNVIQKEQTDSKNQVCESL 360
                            S  ++  +     VYQ QMSKEGL+ VIQ+EQTDS        
Sbjct: 652 ----------------LSAGTIEEK-----VYQRQMSKEGLQKVIQQEQTDS-------- 682

Query: 361 LSSHHVIDIALKA**QVFYLQGNFLSIEDLRDLFTFHENVR 483
                               QGN LS E+LRDLFTFHEN++
Sbjct: 683 -----------------LVAQGNLLSTENLRDLFTFHENIK 706


>gb|AFW73577.1| hypothetical protein ZEAMMB73_198499 [Zea mays]
          Length = 392

 Score =  111 bits (277), Expect = 5e-22
 Identities = 71/161 (44%), Positives = 85/161 (52%)
 Frame = +1

Query: 1   SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAASLEGWAEKESLYLLIF*HWYH*RKGF 180
           SSKAGGCGLNL+GGNRLVLFDPDWNPANDKQAAA +    +K+ +Y+  F          
Sbjct: 83  SSKAGGCGLNLVGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRF---------- 132

Query: 181 DVTFK*WLYCTE*SS*FSLVSLMNQFNFL*VYQCQMSKEGLKNVIQKEQTDSKNQVCESL 360
                            S  ++  +     VYQ QMSKEGL+ VIQ+EQ D+K       
Sbjct: 133 ----------------LSTGTIEEK-----VYQRQMSKEGLQKVIQQEQADNK------- 164

Query: 361 LSSHHVIDIALKA**QVFYLQGNFLSIEDLRDLFTFHENVR 483
                              +QGN LS EDLRDLF FHE+VR
Sbjct: 165 -------------------MQGNSLSTEDLRDLFIFHEHVR 186


>dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana]
          Length = 959

 Score =  110 bits (276), Expect = 7e-22
 Identities = 72/166 (43%), Positives = 87/166 (52%)
 Frame = +1

Query: 1   SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAASLEGWAEKESLYLLIF*HWYH*RKGF 180
           SSKAGGCGLNLIG NRLVLFDPDWNPANDKQAAA +    +K+ +Y+  F          
Sbjct: 610 SSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRF---------- 659

Query: 181 DVTFK*WLYCTE*SS*FSLVSLMNQFNFL*VYQCQMSKEGLKNVIQKEQTDSKNQVCESL 360
                            S  ++  +     VYQ QMSKEGL+ VIQ EQTD+  +     
Sbjct: 660 ----------------LSTGTIEEK-----VYQRQMSKEGLQKVIQHEQTDNSTR----- 693

Query: 361 LSSHHVIDIALKA**QVFYLQGNFLSIEDLRDLFTFHENVRHVYPL 498
                               QGN LS EDLRDLF+FH +VR+V+ L
Sbjct: 694 --------------------QGNLLSTEDLRDLFSFHGDVRYVFLL 719


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