BLASTX nr result

ID: Panax21_contig00015821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015821
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285859.1| PREDICTED: uncharacterized protein LOC100267...   258   6e-67
ref|NP_564152.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain ...   239   2e-61
emb|CBI19014.3| unnamed protein product [Vitis vinifera]              237   1e-60
ref|XP_002890465.1| hypothetical protein ARALYDRAFT_472418 [Arab...   236   2e-60
ref|XP_002307436.1| predicted protein [Populus trichocarpa] gi|2...   236   3e-60

>ref|XP_002285859.1| PREDICTED: uncharacterized protein LOC100267707 [Vitis vinifera]
          Length = 274

 Score =  258 bits (659), Expect = 6e-67
 Identities = 124/196 (63%), Positives = 145/196 (73%), Gaps = 1/196 (0%)
 Frame = +1

Query: 49  GSNKS-GAFFMATLVMWGVSVFFEIVFNKRTKLISVVAGYCFYQLANWVVRNWVSRDPLF 225
           G NK+ GAFF+ATL++W +SV FEIVFNKR +L+SVV G+CFYQ ANWV+R+WVS+DPL 
Sbjct: 7   GQNKAPGAFFLATLLLWMISVLFEIVFNKRRELLSVVGGFCFYQFANWVIRSWVSKDPLL 66

Query: 226 VNTCVSLLHSSMTYSSXXXXXXXXXXXXXXXXXXXXSSMTYSSVVFILINQFIKNGSSEM 405
           VNTCVSLLHSS+T +S                           V+FIL+N+ I+ GS+ M
Sbjct: 67  VNTCVSLLHSSITSAS---------------------------VIFILVNELIRMGSNGM 99

Query: 406 FEHSQLVGDTWAWAYPVLCFSCGYFAYDQWDMLRYRLYSGWIPSXXXXXXXXXVCFTLAL 585
           FEHS+LVG+TW WAYP LCFSCGYFAYDQWDML YRLYSGWIPS         VCFTLAL
Sbjct: 100 FEHSKLVGNTWPWAYPALCFSCGYFAYDQWDMLHYRLYSGWIPSILVHHLLLLVCFTLAL 159

Query: 586 YRNVTINYLILTLVCE 633
           YRNVTINYLILTL+CE
Sbjct: 160 YRNVTINYLILTLICE 175


>ref|NP_564152.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
           [Arabidopsis thaliana]
           gi|5263332|gb|AAD41434.1|AC007727_23 F8K7.23
           [Arabidopsis thaliana]
           gi|6552728|gb|AAF16527.1|AC013482_1 T26F17.1
           [Arabidopsis thaliana] gi|17380914|gb|AAL36269.1|
           unknown protein [Arabidopsis thaliana]
           gi|20258983|gb|AAM14207.1| unknown protein [Arabidopsis
           thaliana] gi|21593249|gb|AAM65198.1| unknown
           [Arabidopsis thaliana] gi|332192036|gb|AEE30157.1| TRAM,
           LAG1 and CLN8 (TLC) lipid-sensing domain containing
           protein [Arabidopsis thaliana]
          Length = 288

 Score =  239 bits (611), Expect = 2e-61
 Identities = 121/206 (58%), Positives = 141/206 (68%), Gaps = 2/206 (0%)
 Frame = +1

Query: 22  MARGSSHENGSNKSGA--FFMATLVMWGVSVFFEIVFNKRTKLISVVAGYCFYQLANWVV 195
           MAR     +G  K+GA  FF+ATL++W VSV FEI FN RT+L+ V+ G CF+QL NWVV
Sbjct: 1   MARNGIGSSGGKKNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVV 60

Query: 196 RNWVSRDPLFVNTCVSLLHSSMTYSSXXXXXXXXXXXXXXXXXXXXSSMTYSSVVFILIN 375
           R+W+SRDP+FVNT VSLLHS +T +S                           VVFIL+N
Sbjct: 61  RSWISRDPIFVNTSVSLLHSIITSAS---------------------------VVFILLN 93

Query: 376 QFIKNGSSEMFEHSQLVGDTWAWAYPVLCFSCGYFAYDQWDMLRYRLYSGWIPSXXXXXX 555
           Q +  G  EMF+HS+LVG TW WAYP LCFSCGYFAYDQWDML+YRLYSG IPS      
Sbjct: 94  QCLAKGLDEMFDHSELVGGTWKWAYPALCFSCGYFAYDQWDMLQYRLYSGLIPSILVHHL 153

Query: 556 XXXVCFTLALYRNVTINYLILTLVCE 633
              VCFTLALYRNVTINYLILTL+CE
Sbjct: 154 VLLVCFTLALYRNVTINYLILTLICE 179


>emb|CBI19014.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  237 bits (605), Expect = 1e-60
 Identities = 113/178 (63%), Positives = 130/178 (73%)
 Frame = +1

Query: 100 VSVFFEIVFNKRTKLISVVAGYCFYQLANWVVRNWVSRDPLFVNTCVSLLHSSMTYSSXX 279
           +SV FEIVFNKR +L+SVV G+CFYQ ANWV+R+WVS+DPL VNTCVSLLHSS+T +S  
Sbjct: 2   ISVLFEIVFNKRRELLSVVGGFCFYQFANWVIRSWVSKDPLLVNTCVSLLHSSITSAS-- 59

Query: 280 XXXXXXXXXXXXXXXXXXSSMTYSSVVFILINQFIKNGSSEMFEHSQLVGDTWAWAYPVL 459
                                    V+FIL+N+ I+ GS+ MFEHS+LVG+TW WAYP L
Sbjct: 60  -------------------------VIFILVNELIRMGSNGMFEHSKLVGNTWPWAYPAL 94

Query: 460 CFSCGYFAYDQWDMLRYRLYSGWIPSXXXXXXXXXVCFTLALYRNVTINYLILTLVCE 633
           CFSCGYFAYDQWDML YRLYSGWIPS         VCFTLALYRNVTINYLILTL+CE
Sbjct: 95  CFSCGYFAYDQWDMLHYRLYSGWIPSILVHHLLLLVCFTLALYRNVTINYLILTLICE 152


>ref|XP_002890465.1| hypothetical protein ARALYDRAFT_472418 [Arabidopsis lyrata subsp.
           lyrata] gi|297336307|gb|EFH66724.1| hypothetical protein
           ARALYDRAFT_472418 [Arabidopsis lyrata subsp. lyrata]
          Length = 288

 Score =  236 bits (603), Expect = 2e-60
 Identities = 117/193 (60%), Positives = 135/193 (69%)
 Frame = +1

Query: 55  NKSGAFFMATLVMWGVSVFFEIVFNKRTKLISVVAGYCFYQLANWVVRNWVSRDPLFVNT 234
           N +G FF+ATL++W VSV FEI FN RT+L+ V+ G CF+QL NWVVR+W+SRDPLFVNT
Sbjct: 14  NGAGEFFLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVVRSWISRDPLFVNT 73

Query: 235 CVSLLHSSMTYSSXXXXXXXXXXXXXXXXXXXXSSMTYSSVVFILINQFIKNGSSEMFEH 414
            VSLLHS +T +S                           VVFIL+NQ +  G  EMF+H
Sbjct: 74  SVSLLHSIITSAS---------------------------VVFILLNQCLAKGLDEMFDH 106

Query: 415 SQLVGDTWAWAYPVLCFSCGYFAYDQWDMLRYRLYSGWIPSXXXXXXXXXVCFTLALYRN 594
           S+LVG TW WAYP LCFSCGYFAYDQWDML+YRLYSG IPS         VCFTLALYRN
Sbjct: 107 SELVGGTWKWAYPALCFSCGYFAYDQWDMLQYRLYSGLIPSILVHHLVLLVCFTLALYRN 166

Query: 595 VTINYLILTLVCE 633
           VTINYLILTL+CE
Sbjct: 167 VTINYLILTLICE 179


>ref|XP_002307436.1| predicted protein [Populus trichocarpa] gi|222856885|gb|EEE94432.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  236 bits (602), Expect = 3e-60
 Identities = 124/205 (60%), Positives = 142/205 (69%), Gaps = 1/205 (0%)
 Frame = +1

Query: 22  MARGSS-HENGSNKSGAFFMATLVMWGVSVFFEIVFNKRTKLISVVAGYCFYQLANWVVR 198
           MAR +S ++N  NK GAFF+ATL++W VSV FEI FNKRT+L+ +VAG C +Q+ANW +R
Sbjct: 1   MARTTSQNQNEKNKVGAFFLATLILWFVSVLFEIFFNKRTELLWIVAGACLFQIANWAIR 60

Query: 199 NWVSRDPLFVNTCVSLLHSSMTYSSXXXXXXXXXXXXXXXXXXXXSSMTYSSVVFILINQ 378
           ++VSRDPLFVNT VSLLHS++   S                           VV IL+NQ
Sbjct: 61  SFVSRDPLFVNTSVSLLHSTIISVS---------------------------VVSILVNQ 93

Query: 379 FIKNGSSEMFEHSQLVGDTWAWAYPVLCFSCGYFAYDQWDMLRYRLYSGWIPSXXXXXXX 558
            +KNGS  MFEHSQLVG TW WAY  LCFSCGYFAYDQ DML YRLYSG IPS       
Sbjct: 94  CLKNGSDGMFEHSQLVGGTWEWAYAALCFSCGYFAYDQLDMLFYRLYSGLIPSILVHHMI 153

Query: 559 XXVCFTLALYRNVTINYLILTLVCE 633
             VCFTLALYRNVTINYLILTLVCE
Sbjct: 154 LLVCFTLALYRNVTINYLILTLVCE 178


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