BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015811
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   127   7e-28
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   125   3e-27
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   124   8e-27
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...   122   3e-26

>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
           subunit 1-like [Cucumis sativus]
          Length = 2019

 Score =  127 bits (320), Expect = 7e-28
 Identities = 76/159 (47%), Positives = 89/159 (55%), Gaps = 2/159 (1%)
 Frame = +1

Query: 10  R*WDLRSREFY*YLGVNLRPKLRKVLV--IPRKIPDETRKKLVGKGFLAQDGYIFQYLHV 183
           R WD   R  + Y G N    L  V+V  + +KIP+ETRKKL G+G+  QDGYI QYL V
Sbjct: 185 RFWDFLERYGFRY-GDNFTRTLLSVMVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPV 243

Query: 184 PPNCLSVPNILDGIVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVLKKVVKQ 363
           PPNCLSVP I DG+                                      +LKK++KQ
Sbjct: 244 PPNCLSVPEISDGVT----------------------------VMSSDPAVSMLKKILKQ 275

Query: 364 IEIIKSSRSGTPNFESHEIEAKDLGAAVAQYLQVRGTAK 480
           +EIIK SRSG PNFESHE+EA DL  AV QYLQVRGT K
Sbjct: 276 VEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVK 314


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  125 bits (315), Expect = 3e-27
 Identities = 75/157 (47%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
 Frame = +1

Query: 16  WDLRSREFY*YLGVNLRPKL--RKVLVIPRKIPDETRKKLVGKGFLAQDGYIFQYLHVPP 189
           WD  +R  Y Y G NL   L   +V+ I R+IP++TRKKLV KG+  QDGYI QYL VPP
Sbjct: 217 WDFLARYGYRY-GHNLSRILLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPP 275

Query: 190 NCLSVPNILDGIVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVLKKVVKQIE 369
           NCLSVP+I DG+                                      +LKKV+KQIE
Sbjct: 276 NCLSVPDISDGV----------------------------SIMSSDLSVSMLKKVLKQIE 307

Query: 370 IIKSSRSGTPNFESHEIEAKDLGAAVAQYLQVRGTAK 480
           +IK SRSG PNFESH+IEA +L +++ QYL+VRGTAK
Sbjct: 308 VIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAK 344


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  125 bits (315), Expect = 3e-27
 Identities = 75/157 (47%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
 Frame = +1

Query: 16  WDLRSREFY*YLGVNLRPKL--RKVLVIPRKIPDETRKKLVGKGFLAQDGYIFQYLHVPP 189
           WD  +R  Y Y G NL   L   +V+ I R+IP++TRKKLV KG+  QDGYI QYL VPP
Sbjct: 157 WDFLARYGYRY-GHNLSRILLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPP 215

Query: 190 NCLSVPNILDGIVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVLKKVVKQIE 369
           NCLSVP+I DG+                                      +LKKV+KQIE
Sbjct: 216 NCLSVPDISDGV----------------------------SIMSSDLSVSMLKKVLKQIE 247

Query: 370 IIKSSRSGTPNFESHEIEAKDLGAAVAQYLQVRGTAK 480
           +IK SRSG PNFESH+IEA +L +++ QYL+VRGTAK
Sbjct: 248 VIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAK 284


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
           sativus]
          Length = 1959

 Score =  124 bits (311), Expect = 8e-27
 Identities = 75/159 (47%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
 Frame = +1

Query: 10  R*WDLRSREFY*YLGVNLRPKLR--KVLVIPRKIPDETRKKLVGKGFLAQDGYIFQYLHV 183
           R WD   R  + Y G N    L   +V  + +KIP+ETRKKL G+G+  QDGYI QYL V
Sbjct: 155 RFWDFLERYGFRY-GDNFTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPV 213

Query: 184 PPNCLSVPNILDGIVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVLKKVVKQ 363
           PPNCLSVP I DG+                                      +LKK++KQ
Sbjct: 214 PPNCLSVPEISDGVT----------------------------VMSSDPAVSMLKKILKQ 245

Query: 364 IEIIKSSRSGTPNFESHEIEAKDLGAAVAQYLQVRGTAK 480
           +EIIK SRSG PNFESHE+EA DL  AV QYLQVRGT K
Sbjct: 246 VEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVK 284


>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 991

 Score =  122 bits (306), Expect = 3e-26
 Identities = 68/134 (50%), Positives = 82/134 (61%)
 Frame = +1

Query: 79  KVLVIPRKIPDETRKKLVGKGFLAQDGYIFQYLHVPPNCLSVPNILDGIVSXXXXXXXXX 258
           +VL + R+IP +TRKKL  KG+  QDGYI +Y+ VPPNCLSVP+I DG+           
Sbjct: 181 EVLEMLRRIPQDTRKKLAKKGYFPQDGYIMRYVPVPPNCLSVPDISDGV----------- 229

Query: 259 XXXXXXXXXXXXXXXXXXXXXXXXXXEVLKKVVKQIEIIKSSRSGTPNFESHEIEAKDLG 438
                                      +LKKV+KQ+EIIKSSRSG PNFESHE+EA DL 
Sbjct: 230 -----------------SVMSSDLSISMLKKVLKQVEIIKSSRSGEPNFESHEVEAVDLQ 272

Query: 439 AAVAQYLQVRGTAK 480
           +AV QYLQVRGTAK
Sbjct: 273 SAVDQYLQVRGTAK 286