BLASTX nr result

ID: Panax21_contig00015794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015794
         (908 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530316.1| zinc finger protein, putative [Ricinus commu...   259   5e-67
ref|XP_003632093.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...   254   1e-65
ref|XP_002530314.1| zinc finger protein, putative [Ricinus commu...   252   7e-65
ref|XP_002327310.1| predicted protein [Populus trichocarpa] gi|2...   243   6e-62
ref|XP_002326038.1| predicted protein [Populus trichocarpa] gi|2...   241   1e-61

>ref|XP_002530316.1| zinc finger protein, putative [Ricinus communis]
           gi|223530172|gb|EEF32083.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 255

 Score =  259 bits (663), Expect = 5e-67
 Identities = 116/207 (56%), Positives = 140/207 (67%)
 Frame = +3

Query: 6   EEEGENGSIFTCEICIEPISLSNKKFKNQRKCVHPFCLDCIIKYITVKTQENISQIKCPA 185
           E++ E  S FTCEICIEP+ LSNKKF+N   C HPFCLDCI KY+ VK +  I  IKCP 
Sbjct: 18  EQKEEVVSSFTCEICIEPM-LSNKKFENASLCTHPFCLDCISKYVEVKVEGFIGNIKCPG 76

Query: 186 LDCEHYFDCLYCKPIIPHQLFDKWSDLLCESALLGFDRCYCPNRDCSALIVNECGGNVRK 365
             C+H  D L C+ II   +FDKW DLLC+S + G +RCYCP RDCSAL++NEC   ++K
Sbjct: 77  TSCKHPLDPLSCRSIISKPVFDKWCDLLCDSVVSGVERCYCPYRDCSALVLNECKDKLKK 136

Query: 366 SKCPMCKKLFCFRCKIVWHAGYGCEESGELRDGNDVAFGVLAERKKWKRCPTCQHFVELI 545
            KCP CKK  C+ CKI WHAGY C ESG+LRD NDV  G L E KKW RC  C H VE +
Sbjct: 137 IKCPNCKKNLCYVCKIPWHAGYQCNESGQLRDRNDVLIGELIEEKKWTRCYNCGHSVERV 196

Query: 546 EGCAIVRCRCRTDFCYNCGRKVNRHWC 626
            GC  V+C+C   FC+ CG + +   C
Sbjct: 197 SGCRDVKCKCGVRFCHQCGGRFHLGPC 223


>ref|XP_003632093.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase RNF144A-like [Vitis vinifera]
          Length = 212

 Score =  254 bits (650), Expect = 1e-65
 Identities = 114/192 (59%), Positives = 140/192 (72%), Gaps = 2/192 (1%)
 Frame = +3

Query: 3   QEEEGENGSIFTCEICIEPISLSNKKFKNQRKCVHPFCLDCIIKYITVKTQEN-ISQIKC 179
           ++EE ++ S   CEICIEPIS SNKKFKN   C H FC+DC+  YI VK ++  +  + C
Sbjct: 17  EDEEEDDDSTLACEICIEPIS-SNKKFKNNHNCTHSFCMDCMASYIQVKVEDXYVPDVAC 75

Query: 180 PALDCEHYFDCLYCKPIIPHQLFDKWSDLLCESA-LLGFDRCYCPNRDCSALIVNECGGN 356
           PALDC H  + L+  PI+P  LF KWSDLLC+   LLGF+RCY PN+ CS LIVNECGGN
Sbjct: 76  PALDCGHLLNPLHYLPILPATLFTKWSDLLCKKVVLLGFERCYYPNQTCSVLIVNECGGN 135

Query: 357 VRKSKCPMCKKLFCFRCKIVWHAGYGCEESGELRDGNDVAFGVLAERKKWKRCPTCQHFV 536
           VR+SKCP CKKLFCF+CK  WH+GY C++  E+RD ND+ FG L E KKW RCP+C H V
Sbjct: 136 VRRSKCPNCKKLFCFQCKSPWHSGYRCDKREEMRDVNDMLFGELVETKKWSRCPSCGHCV 195

Query: 537 ELIEGCAIVRCR 572
           EL+EGC  V C+
Sbjct: 196 ELVEGCPNVSCK 207


>ref|XP_002530314.1| zinc finger protein, putative [Ricinus communis]
           gi|223530170|gb|EEF32081.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 213

 Score =  252 bits (644), Expect = 7e-65
 Identities = 110/207 (53%), Positives = 139/207 (67%), Gaps = 1/207 (0%)
 Frame = +3

Query: 33  FTCEICIEPISLSNKKFKNQRKCVHPFCLDCIIKYITVKTQENISQIKCPALDCEHYFDC 212
           FTCEICIEP +LSN+KFKN   C HPFC DCI KY+ VK  +N++ IKCP+L C+   + 
Sbjct: 7   FTCEICIEP-TLSNRKFKNGNGCTHPFCNDCIAKYVEVKVIDNVANIKCPSLGCDRPLEP 65

Query: 213 LYCKPIIPHQLFDKWSDLLCESALLGFDRCYCPNRDCSALIVNECG-GNVRKSKCPMCKK 389
             C  +IP  +FDKWSDLLCE  +L ++RCYCP  +CSALI+NEC    V+K  CP CKK
Sbjct: 66  TSCMALIPKAIFDKWSDLLCEVRVLEWERCYCPYENCSALILNECRYHKVKKVTCPNCKK 125

Query: 390 LFCFRCKIVWHAGYGCEESGELRDGNDVAFGVLAERKKWKRCPTCQHFVELIEGCAIVRC 569
            FCF CKI WH GY C ES +LRDGNDV  G L E ++W RC  C H VE ++GC  + C
Sbjct: 126 NFCFNCKIPWHGGYWCRESRQLRDGNDVLAGELIENQRWTRCYNCGHSVERVDGCKFISC 185

Query: 570 RCRTDFCYNCGRKVNRHWCGCQRIVTC 650
           RC  +FC+ CG + +   C  ++   C
Sbjct: 186 RCGVEFCHECGYRAHCGPCSLEKRAVC 212


>ref|XP_002327310.1| predicted protein [Populus trichocarpa] gi|222835680|gb|EEE74115.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  243 bits (619), Expect = 6e-62
 Identities = 106/195 (54%), Positives = 131/195 (67%)
 Frame = +3

Query: 18  ENGSIFTCEICIEPISLSNKKFKNQRKCVHPFCLDCIIKYITVKTQENISQIKCPALDCE 197
           E  S FTCEIC EP+ L+ +KFKN   C HPFCLDCI KYI V  +E+   I+CP L+C+
Sbjct: 22  EEDSNFTCEICTEPM-LAIRKFKNGSLCKHPFCLDCIAKYIEVTVEESTGCIECPGLNCK 80

Query: 198 HYFDCLYCKPIIPHQLFDKWSDLLCESALLGFDRCYCPNRDCSALIVNECGGNVRKSKCP 377
              D L C+ II   +F+KW D LC+S +LG + CYCP RDCS L++NEC  N++K KCP
Sbjct: 81  QPLDPLSCRRIISKPIFEKWCDHLCDSTVLGSESCYCPYRDCSVLVLNECMDNLKKIKCP 140

Query: 378 MCKKLFCFRCKIVWHAGYGCEESGELRDGNDVAFGVLAERKKWKRCPTCQHFVELIEGCA 557
            CKK FCF CKI WHAGY C ES  LRD ND+  G L E K+W RC  C H VE + GC 
Sbjct: 141 NCKKNFCFLCKIPWHAGYRCNESRHLRDRNDILVGELIEEKRWTRCYNCGHSVERVSGCR 200

Query: 558 IVRCRCRTDFCYNCG 602
            ++C+C   FC+ CG
Sbjct: 201 DIKCKCGVQFCHQCG 215


>ref|XP_002326038.1| predicted protein [Populus trichocarpa] gi|222862913|gb|EEF00420.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  241 bits (616), Expect = 1e-61
 Identities = 108/212 (50%), Positives = 134/212 (63%)
 Frame = +3

Query: 3   QEEEGENGSIFTCEICIEPISLSNKKFKNQRKCVHPFCLDCIIKYITVKTQENISQIKCP 182
           Q+EE  N   FTCEIC +P+ LS + FKN   C HPFCLDCI KYI +  +E    I+CP
Sbjct: 20  QQEEDSN---FTCEICSDPM-LSTRNFKNGIVCKHPFCLDCITKYIEITVEETSGCIECP 75

Query: 183 ALDCEHYFDCLYCKPIIPHQLFDKWSDLLCESALLGFDRCYCPNRDCSALIVNECGGNVR 362
            L+C+   D L C+PII   +F+KW D LC+S +LG + CYCP RDCS L++NEC   ++
Sbjct: 76  GLNCKQLLDPLSCRPIISKPIFEKWCDRLCDSMVLGSESCYCPYRDCSVLVLNECKDKLK 135

Query: 363 KSKCPMCKKLFCFRCKIVWHAGYGCEESGELRDGNDVAFGVLAERKKWKRCPTCQHFVEL 542
           K  CP CKK FCF CKI WH GY C ES  LRD ND+  G L E KKW RC  C H VE 
Sbjct: 136 KINCPNCKKNFCFLCKIPWHTGYRCSESRHLRDRNDILAGELIEEKKWTRCYNCSHSVER 195

Query: 543 IEGCAIVRCRCRTDFCYNCGRKVNRHWCGCQR 638
           + GC  ++CRC   FC+ CG   +   C  +R
Sbjct: 196 VSGCRDIKCRCGFRFCHQCGGPFHSGLCKHKR 227


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