BLASTX nr result

ID: Panax21_contig00015778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015778
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269494.1| PREDICTED: uncharacterized protein LOC100250...   166   2e-39
gb|ADB08056.1| microtubule-associated protein [Nicotiana bentham...   165   7e-39
emb|CBI40105.3| unnamed protein product [Vitis vinifera]              135   7e-30
gb|ABK96719.1| unknown [Populus trichocarpa x Populus deltoides]      132   4e-29
ref|XP_002527807.1| conserved hypothetical protein [Ricinus comm...   130   2e-28

>ref|XP_002269494.1| PREDICTED: uncharacterized protein LOC100250355 [Vitis vinifera]
          Length = 830

 Score =  166 bits (421), Expect = 2e-39
 Identities = 97/178 (54%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
 Frame = +3

Query: 72   RQLGSEEDAENVVCGEDVQRKDA----VEEHEQDVNIKDFSSTSDDRCFNGNVGSEEESS 239
            RQLGSEED   +V  E + +KD     VE  EQD N+  F+  +DD    GN GSEE SS
Sbjct: 558  RQLGSEEDIGEIVRNEVLDQKDPIHVEVEVEEQDANLNSFTCPADDSHLIGNTGSEENSS 617

Query: 240  IFSDSPSPIGGATDHENESE-SSVASNLSVVENDVEQNNANCSKSDPEALPLLISDSPDK 416
            IFS S SP+    DHEN+SE SS+ SN S+ END E NNA   +  PE  PL +SD P+ 
Sbjct: 618  IFSASTSPL--TNDHENDSEKSSIVSNSSLDENDDEPNNAEAFRIIPED-PLPVSDPPED 674

Query: 417  VCLKSEQNVDSTGKPSTNSKERKLIPGKFQWFWKFGRN-AGDGTSEKGGSSEATKASN 587
            +  K E N DSTGK     KERKL+ GKFQWFWKFGRN AG+ TSEK G+SEA K++N
Sbjct: 675  ISPKPETNNDSTGKQEAGLKERKLLSGKFQWFWKFGRNAAGEETSEKEGASEAAKSAN 732


>gb|ADB08056.1| microtubule-associated protein [Nicotiana benthamiana]
          Length = 813

 Score =  165 bits (417), Expect = 7e-39
 Identities = 88/176 (50%), Positives = 117/176 (66%), Gaps = 1/176 (0%)
 Frame = +3

Query: 69   ARQLGSEEDAENVVCGEDVQRKDAVEEHEQDVNIKDFSSTSDDRCFNGNVGSEEESSIFS 248
            A+QLG++ED E ++  E+++++  V+   QD N  +F+ TS++ C  G+  SE+ SSIFS
Sbjct: 549  AQQLGADEDIEKLIDDENIEQEAPVDVVGQDCNDGNFTCTSEESCSTGSAASEQNSSIFS 608

Query: 249  DSPSPIGGATDHENESE-SSVASNLSVVENDVEQNNANCSKSDPEALPLLISDSPDKVCL 425
            D PSPI  A DHEN SE SSVASN S  E D + N+   S ++ E  PL +S  P +  L
Sbjct: 609  DPPSPISDANDHENRSERSSVASNFSADEIDADVNSGEASCTNLEVSPLPVSVPPQQTLL 668

Query: 426  KSEQNVDSTGKPSTNSKERKLIPGKFQWFWKFGRNAGDGTSEKGGSSEATKASNNG 593
            KSE++VDS GK     KERKL+ GKFQW WKFGRN G+ TSEK G  ++TKA N G
Sbjct: 669  KSEESVDSGGKGPVGFKERKLLSGKFQWLWKFGRNGGEETSEK-GIGDSTKACNCG 723


>emb|CBI40105.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  135 bits (339), Expect = 7e-30
 Identities = 76/128 (59%), Positives = 89/128 (69%), Gaps = 2/128 (1%)
 Frame = +3

Query: 210 GNVGSEEESSIFSDSPSPIGGATDHENESE-SSVASNLSVVENDVEQNNANCSKSDPEAL 386
           GN GSEE SSIFS S SP+    DHEN+SE SS+ SN S+ END E NNA   +  PE  
Sbjct: 438 GNTGSEENSSIFSASTSPL--TNDHENDSEKSSIVSNSSLDENDDEPNNAEAFRIIPED- 494

Query: 387 PLLISDSPDKVCLKSEQNVDSTGKPSTNSKERKLIPGKFQWFWKFGRN-AGDGTSEKGGS 563
           PL +SD P+ +  K E N DSTGK     KERKL+ GKFQWFWKFGRN AG+ TSEK G+
Sbjct: 495 PLPVSDPPEDISPKPETNNDSTGKQEAGLKERKLLSGKFQWFWKFGRNAAGEETSEKEGA 554

Query: 564 SEATKASN 587
           SEA K++N
Sbjct: 555 SEAAKSAN 562


>gb|ABK96719.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 823

 Score =  132 bits (333), Expect = 4e-29
 Identities = 87/187 (46%), Positives = 110/187 (58%), Gaps = 7/187 (3%)
 Frame = +3

Query: 69   ARQLGSEEDAENVVCGEDVQRKD----AVEEHEQDVNIKDFSSTSDDRCFNGNVGSEEES 236
            + +LG + D     C E   +KD     VE    D    DF+ ++++RC +GN GSEE S
Sbjct: 553  SHELGMDGDIGKSDCHEVSGKKDHQTAEVEGGGPDSVNNDFTCSTEERCLSGNSGSEENS 612

Query: 237  SIFSDSPSPIGGATDHENESE-SSVASNLSVVENDVEQNNANCSKSDPEALPLLISDSPD 413
            S+FSD  S + G  +HEN+SE SSVASN+SV END   + A   + DP    L +S  P+
Sbjct: 613  SVFSDPSSSLSGGNEHENDSEKSSVASNMSVDEND---DQAEALQEDP---TLPVSHPPE 666

Query: 414  KVCLKSEQNVDSTGKPSTNSKERKLIPGKFQWFWKFGRN-AGDGTSEKG-GSSEATKASN 587
             V L S  N +  GK     KERKL  GKFQWFWKFGRN AG+ TSEKG G+ EATK  N
Sbjct: 667  GVSLNSGTNNEPAGKQVAGPKERKL-SGKFQWFWKFGRNTAGEETSEKGSGTFEATKPVN 725

Query: 588  NGCIQHN 608
            +   Q N
Sbjct: 726  DASNQIN 732


>ref|XP_002527807.1| conserved hypothetical protein [Ricinus communis]
            gi|223532803|gb|EEF34579.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 825

 Score =  130 bits (326), Expect = 2e-28
 Identities = 78/179 (43%), Positives = 107/179 (59%), Gaps = 5/179 (2%)
 Frame = +3

Query: 69   ARQLGSEEDAENVVCGEDVQRKD----AVEEHEQDVNIKDFSSTSDDRCFNGNVGSEEES 236
            +R+LG ++D E   C E   + D     VE  ++D   KDF  T + RC +GN GSEE S
Sbjct: 557  SRELGFDDDTEKADCSEVSDQNDNICAEVEGEDRDGVCKDF--TGEGRCSSGNTGSEENS 614

Query: 237  SIFSDSPSPIGGATDHENESE-SSVASNLSVVENDVEQNNANCSKSDPEALPLLISDSPD 413
            S+FSD  SP+ GA +HE++SE SS+ASN S+ E D      +  K+  E   L IS  PD
Sbjct: 615  SLFSDPSSPLSGADNHEHDSEKSSIASNSSIDETD------DHPKTFQEDATLPISHLPD 668

Query: 414  KVCLKSEQNVDSTGKPSTNSKERKLIPGKFQWFWKFGRNAGDGTSEKGGSSEATKASNN 590
               L S  N ++TGK    +KERKL+ GKFQWFWKFGR+  D  + +GG   A +++N+
Sbjct: 669  DAPLDSGSNNEATGKSVVGTKERKLLSGKFQWFWKFGRSTVDEETSEGGRG-AVESTNS 726


Top