BLASTX nr result

ID: Panax21_contig00015743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015743
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79548.1|AC022464_6 F22G5.9 [Arabidopsis thaliana]                79   4e-13
ref|NP_172233.1| scarecrow-like protein 14 [Arabidopsis thaliana...    79   4e-13
gb|AFC36442.1| scarecrow-like protein 1 [Quercus robur]                76   3e-12
gb|ABG77971.1| SCARECROW-like protein 1 [Castanea sativa]              76   3e-12
ref|XP_002533753.1| transcription factor, putative [Ricinus comm...    75   5e-12

>gb|AAF79548.1|AC022464_6 F22G5.9 [Arabidopsis thaliana]
          Length = 1502

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/137 (33%), Positives = 62/137 (45%)
 Frame = +3

Query: 123 FSGALNGLEFGDEIVLPRFDHSPPNLANGFQFNXXXXXXXXXXXXXXXXXXXXXXXXXXX 302
           F G+++ L+F  +  LP   +    LANGF  +                           
Sbjct: 8   FPGSMDELDFNKDFDLPPSSNQTLGLANGFYLDDLDFSSLDPPEAYPSQNNNNNNINNKA 67

Query: 303 XXXXXXXXXXXXXVFSDGVLKFLNQILMEDKIEEKPCMFHDPLSLQEAENSFYEVLGEKY 482
                         FSD VLK+++Q+LME+ +EEKPCMFHD L+LQ AE S YE LGEKY
Sbjct: 68  VAGDLLSSSSDDADFSDSVLKYISQVLMEEDMEEKPCMFHDALALQAAEKSLYEALGEKY 127

Query: 483 TPLPHQPQVDANQNVES 533
                   VD  + + S
Sbjct: 128 PSSSSASSVDHPERLAS 144


>ref|NP_172233.1| scarecrow-like protein 14 [Arabidopsis thaliana]
           gi|206558299|sp|Q9XE58.2|SCL14_ARATH RecName:
           Full=Scarecrow-like protein 14; Short=AtSCL14; AltName:
           Full=GRAS family protein 2; Short=AtGRAS-2
           gi|222423057|dbj|BAH19510.1| AT1G07530 [Arabidopsis
           thaliana] gi|332190018|gb|AEE28139.1| scarecrow-like
           protein 14 [Arabidopsis thaliana]
          Length = 769

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/137 (33%), Positives = 62/137 (45%)
 Frame = +3

Query: 123 FSGALNGLEFGDEIVLPRFDHSPPNLANGFQFNXXXXXXXXXXXXXXXXXXXXXXXXXXX 302
           F G+++ L+F  +  LP   +    LANGF  +                           
Sbjct: 8   FPGSMDELDFNKDFDLPPSSNQTLGLANGFYLDDLDFSSLDPPEAYPSQNNNNNNINNKA 67

Query: 303 XXXXXXXXXXXXXVFSDGVLKFLNQILMEDKIEEKPCMFHDPLSLQEAENSFYEVLGEKY 482
                         FSD VLK+++Q+LME+ +EEKPCMFHD L+LQ AE S YE LGEKY
Sbjct: 68  VAGDLLSSSSDDADFSDSVLKYISQVLMEEDMEEKPCMFHDALALQAAEKSLYEALGEKY 127

Query: 483 TPLPHQPQVDANQNVES 533
                   VD  + + S
Sbjct: 128 PSSSSASSVDHPERLAS 144


>gb|AFC36442.1| scarecrow-like protein 1 [Quercus robur]
          Length = 767

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 32/57 (56%), Positives = 45/57 (78%)
 Frame = +3

Query: 345 FSDGVLKFLNQILMEDKIEEKPCMFHDPLSLQEAENSFYEVLGEKYTPLPHQPQVDA 515
           FS+ V K++NQILME+ IE KPCMF+DPL L++ E SFY+ LG+K  PLP+Q  +++
Sbjct: 87  FSETVFKYMNQILMEENIENKPCMFYDPLGLKDTEKSFYDALGQKNPPLPNQNSLES 143


>gb|ABG77971.1| SCARECROW-like protein 1 [Castanea sativa]
          Length = 767

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 32/57 (56%), Positives = 45/57 (78%)
 Frame = +3

Query: 345 FSDGVLKFLNQILMEDKIEEKPCMFHDPLSLQEAENSFYEVLGEKYTPLPHQPQVDA 515
           FS+ V K++NQILME+ IE KPCMF+DPL L++ E SFY+ LG+K  PLP+Q  +++
Sbjct: 87  FSETVFKYMNQILMEENIENKPCMFYDPLGLKDTEKSFYDALGQKNPPLPNQNSLES 143


>ref|XP_002533753.1| transcription factor, putative [Ricinus communis]
           gi|223526341|gb|EEF28640.1| transcription factor,
           putative [Ricinus communis]
          Length = 764

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 48/134 (35%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
 Frame = +3

Query: 105 DPHYSEFSGALNGLEFGDEIVLPRFDHSPPNLANGFQFNXXXXXXXXXXXXXXXXXXXXX 284
           D  ++EFSG    L+F DEI  P   H  P   NG++ N                     
Sbjct: 4   DAGFAEFSG----LKFEDEIDFPDL-HQYPTFTNGYKSNDPTFDIDFNFVDTSLVLLDSD 58

Query: 285 XXXXXXXXXXXXXXXXXXXV--FSDGVLKFLNQILMEDKIEEKPCMFHDPLSLQEAENSF 458
                                 FS+ VL +++Q+LME+ +E+KPCMFHDPL+LQ AE S 
Sbjct: 59  PSRSAPSSVATMEGDSPSDDNDFSETVLNYISQMLMEEDMEQKPCMFHDPLALQAAERSL 118

Query: 459 YEVLGEKYTPLPHQ 500
           Y+VLGEKY   P+Q
Sbjct: 119 YDVLGEKYPSSPNQ 132


Top