BLASTX nr result

ID: Panax21_contig00015724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015724
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   186   3e-45
ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putativ...   184   7e-45
ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   181   6e-44
ref|XP_002327540.1| predicted protein [Populus trichocarpa] gi|2...   177   7e-43
ref|XP_003529884.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   176   2e-42

>ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
           sativus] gi|449476660|ref|XP_004154799.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
           sativus]
          Length = 505

 Score =  186 bits (471), Expect = 3e-45
 Identities = 93/116 (80%), Positives = 96/116 (82%)
 Frame = -3

Query: 537 FKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXTFFT 358
           F++GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH               TFFT
Sbjct: 390 FRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 449

Query: 357 AANARFSKELITILEEAGQKVSTELAAMGRGAPPPPSGHGDFRDRGRGYSGGRPWS 190
           AANARF+KELI ILEEAGQKVS ELAAMGRGAPPPPSGHG FRDRGRGY GGR WS
Sbjct: 450 AANARFAKELIGILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 505


>ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 505

 Score =  184 bits (467), Expect = 7e-45
 Identities = 92/116 (79%), Positives = 97/116 (83%)
 Frame = -3

Query: 537 FKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXTFFT 358
           FKAGKSPIMTATDVAARGLDVKDVK+VINYDFPGSLEDYVH               TFFT
Sbjct: 390 FKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 449

Query: 357 AANARFSKELITILEEAGQKVSTELAAMGRGAPPPPSGHGDFRDRGRGYSGGRPWS 190
           A+NARF+KELI+ILEEAGQKVS ELAAMGRGAPPPPSG+G FRDRGRGY GGR WS
Sbjct: 450 ASNARFAKELISILEEAGQKVSPELAAMGRGAPPPPSGYGGFRDRGRGYGGGRSWS 505


>ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
           gi|297743075|emb|CBI35942.3| unnamed protein product
           [Vitis vinifera]
          Length = 506

 Score =  181 bits (459), Expect = 6e-44
 Identities = 90/115 (78%), Positives = 95/115 (82%)
 Frame = -3

Query: 537 FKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXTFFT 358
           FKAGKSPIMTATDVAARGLDVKDVK+VINYDFPGSLEDYVH               TFFT
Sbjct: 391 FKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 450

Query: 357 AANARFSKELITILEEAGQKVSTELAAMGRGAPPPPSGHGDFRDRGRGYSGGRPW 193
           AANARF+KELITILEEAGQ+V+ ELAAMGRGAPPPPSGHG FRDRGRG+  GR W
Sbjct: 451 AANARFAKELITILEEAGQRVAPELAAMGRGAPPPPSGHGGFRDRGRGHGSGRAW 505


>ref|XP_002327540.1| predicted protein [Populus trichocarpa] gi|222836094|gb|EEE74515.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score =  177 bits (450), Expect = 7e-43
 Identities = 90/116 (77%), Positives = 93/116 (80%)
 Frame = -3

Query: 537 FKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXTFFT 358
           FKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH               TFFT
Sbjct: 382 FKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 441

Query: 357 AANARFSKELITILEEAGQKVSTELAAMGRGAPPPPSGHGDFRDRGRGYSGGRPWS 190
           A NARF+KEL+TILEEAGQKVS EL AM RGAPP  SGHG FRDRGRGYSGGR W+
Sbjct: 442 AGNARFAKELVTILEEAGQKVSPELTAMARGAPPLLSGHGGFRDRGRGYSGGRSWN 497


>ref|XP_003529884.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Glycine
           max]
          Length = 507

 Score =  176 bits (447), Expect = 2e-42
 Identities = 89/116 (76%), Positives = 93/116 (80%)
 Frame = -3

Query: 537 FKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXTFFT 358
           FK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH               T+FT
Sbjct: 392 FKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTYFT 451

Query: 357 AANARFSKELITILEEAGQKVSTELAAMGRGAPPPPSGHGDFRDRGRGYSGGRPWS 190
           AANARF+KELI ILEEAGQKVS ELAAMGRGAPPPPSG   F+DRGRGY   RPWS
Sbjct: 452 AANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGPRGFQDRGRGYGSSRPWS 507


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