BLASTX nr result

ID: Panax21_contig00015723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015723
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42127.1| unknown [Medicago truncatula]                          160   1e-37
ref|XP_003597619.1| DEAD-box ATP-dependent RNA helicase [Medicag...   160   1e-37
ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   159   2e-37
ref|XP_003529884.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   159   3e-37
ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putativ...   159   3e-37

>gb|AFK42127.1| unknown [Medicago truncatula]
          Length = 499

 Score =  160 bits (404), Expect = 1e-37
 Identities = 81/97 (83%), Positives = 86/97 (88%)
 Frame = -3

Query: 509 FKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXAYSFFT 330
           FK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI           AY+FFT
Sbjct: 386 FKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGKTGRAGAKGTAYTFFT 445

Query: 329 AANARFAKELITILEEAGQKVSTELAAMGRGAPPPPS 219
           AANARFAKELI+ILEEAGQ+VS+ELAAMGRGAPPPPS
Sbjct: 446 AANARFAKELISILEEAGQRVSSELAAMGRGAPPPPS 482


>ref|XP_003597619.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|358344685|ref|XP_003636418.1| DEAD-box ATP-dependent
           RNA helicase [Medicago truncatula]
           gi|124360402|gb|ABN08415.1| Helicase, C-terminal
           [Medicago truncatula] gi|355486667|gb|AES67870.1|
           DEAD-box ATP-dependent RNA helicase [Medicago
           truncatula] gi|355502353|gb|AES83556.1| DEAD-box
           ATP-dependent RNA helicase [Medicago truncatula]
          Length = 499

 Score =  160 bits (404), Expect = 1e-37
 Identities = 81/97 (83%), Positives = 86/97 (88%)
 Frame = -3

Query: 509 FKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXAYSFFT 330
           FK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI           AY+FFT
Sbjct: 386 FKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 445

Query: 329 AANARFAKELITILEEAGQKVSTELAAMGRGAPPPPS 219
           AANARFAKELI+ILEEAGQ+VS+ELAAMGRGAPPPPS
Sbjct: 446 AANARFAKELISILEEAGQRVSSELAAMGRGAPPPPS 482


>ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
           gi|297743075|emb|CBI35942.3| unnamed protein product
           [Vitis vinifera]
          Length = 506

 Score =  159 bits (402), Expect = 2e-37
 Identities = 81/97 (83%), Positives = 85/97 (87%)
 Frame = -3

Query: 509 FKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXAYSFFT 330
           FKAGKSPIMTATDVAARGLDVKDVK+VINYDFPGSLEDYVHRI           AY+FFT
Sbjct: 391 FKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 450

Query: 329 AANARFAKELITILEEAGQKVSTELAAMGRGAPPPPS 219
           AANARFAKELITILEEAGQ+V+ ELAAMGRGAPPPPS
Sbjct: 451 AANARFAKELITILEEAGQRVAPELAAMGRGAPPPPS 487


>ref|XP_003529884.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Glycine
           max]
          Length = 507

 Score =  159 bits (401), Expect = 3e-37
 Identities = 81/97 (83%), Positives = 84/97 (86%)
 Frame = -3

Query: 509 FKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXAYSFFT 330
           FK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI           AY++FT
Sbjct: 392 FKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTYFT 451

Query: 329 AANARFAKELITILEEAGQKVSTELAAMGRGAPPPPS 219
           AANARFAKELI ILEEAGQKVS ELAAMGRGAPPPPS
Sbjct: 452 AANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPS 488


>ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 505

 Score =  159 bits (401), Expect = 3e-37
 Identities = 81/97 (83%), Positives = 85/97 (87%)
 Frame = -3

Query: 509 FKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIXXXXXXXXXXXAYSFFT 330
           FKAGKSPIMTATDVAARGLDVKDVK+VINYDFPGSLEDYVHRI           AY+FFT
Sbjct: 390 FKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 449

Query: 329 AANARFAKELITILEEAGQKVSTELAAMGRGAPPPPS 219
           A+NARFAKELI+ILEEAGQKVS ELAAMGRGAPPPPS
Sbjct: 450 ASNARFAKELISILEEAGQKVSPELAAMGRGAPPPPS 486


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