BLASTX nr result

ID: Panax21_contig00015709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015709
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631941.1| PREDICTED: AMSH-like ubiquitin thiolesterase...   129   2e-28
emb|CBI22917.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002519188.1| amsh, putative [Ricinus communis] gi|2235415...   100   1e-19
ref|XP_002316018.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_004161388.1| PREDICTED: AMSH-like ubiquitin thioesterase ...    92   3e-17

>ref|XP_003631941.1| PREDICTED: AMSH-like ubiquitin thiolesterase 3-like [Vitis
           vinifera]
          Length = 459

 Score =  129 bits (325), Expect = 2e-28
 Identities = 73/129 (56%), Positives = 89/129 (68%)
 Frame = +3

Query: 3   IILLRYSSLVSETIPFHRDYQVSYAKERSNYRKKLSIVIDELESLKPEFQRLVDEPSKVH 182
           IILLR+SSL+SETIPFHRDYQV   KER+ YRKKL  V+DELESLKPEFQR V+E +K H
Sbjct: 53  IILLRFSSLLSETIPFHRDYQVLLPKERAIYRKKLLAVLDELESLKPEFQRQVNELNKAH 112

Query: 183 AGTQQYQFDAPDRTPYASESSSFEWPFVSNKASSGFQNMRSQSGITAPLSSRKHGNDRSQ 362
             +QQ Q D  +RTPY SE SS +WP V+ K    F N ++ S   AP  S K+ ND +Q
Sbjct: 113 TVSQQQQIDVLERTPYDSEISS-QWPPVNKKPFPSFDNKQAVS--RAPQISWKYKNDHTQ 169

Query: 363 ALPSTSIDM 389
            L S  + +
Sbjct: 170 VLSSNPMQV 178


>emb|CBI22917.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  129 bits (325), Expect = 2e-28
 Identities = 73/129 (56%), Positives = 89/129 (68%)
 Frame = +3

Query: 3   IILLRYSSLVSETIPFHRDYQVSYAKERSNYRKKLSIVIDELESLKPEFQRLVDEPSKVH 182
           IILLR+SSL+SETIPFHRDYQV   KER+ YRKKL  V+DELESLKPEFQR V+E +K H
Sbjct: 53  IILLRFSSLLSETIPFHRDYQVLLPKERAIYRKKLLAVLDELESLKPEFQRQVNELNKAH 112

Query: 183 AGTQQYQFDAPDRTPYASESSSFEWPFVSNKASSGFQNMRSQSGITAPLSSRKHGNDRSQ 362
             +QQ Q D  +RTPY SE SS +WP V+ K    F N ++ S   AP  S K+ ND +Q
Sbjct: 113 TVSQQQQIDVLERTPYDSEISS-QWPPVNKKPFPSFDNKQAVS--RAPQISWKYKNDHTQ 169

Query: 363 ALPSTSIDM 389
            L S  + +
Sbjct: 170 VLSSNPMQV 178


>ref|XP_002519188.1| amsh, putative [Ricinus communis] gi|223541503|gb|EEF43052.1| amsh,
           putative [Ricinus communis]
          Length = 456

 Score =  100 bits (249), Expect = 1e-19
 Identities = 62/127 (48%), Positives = 79/127 (62%)
 Frame = +3

Query: 3   IILLRYSSLVSETIPFHRDYQVSYAKERSNYRKKLSIVIDELESLKPEFQRLVDEPSKVH 182
           IILLR+SSLVSETIPFH+DY VS  KER  Y K L  V++ELESLKP F R V+E +   
Sbjct: 48  IILLRFSSLVSETIPFHKDYHVSLPKERVAYIKSLLGVLNELESLKPVFHRRVEEINNAF 107

Query: 183 AGTQQYQFDAPDRTPYASESSSFEWPFVSNKASSGFQNMRSQSGITAPLSSRKHGNDRSQ 362
           A TQ  + D P+R    SE S  E+P V N+ S    N++   G+ A  SS K+ N+ +Q
Sbjct: 108 ARTQLCELDGPERLSCDSEPSPSEYPLV-NRTSYTNTNVKRPYGV-ALQSSWKYDNNNTQ 165

Query: 363 ALPSTSI 383
              S S+
Sbjct: 166 VSSSNSL 172


>ref|XP_002316018.1| predicted protein [Populus trichocarpa] gi|222865058|gb|EEF02189.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/113 (46%), Positives = 72/113 (63%)
 Frame = +3

Query: 3   IILLRYSSLVSETIPFHRDYQVSYAKERSNYRKKLSIVIDELESLKPEFQRLVDEPSKVH 182
           I+LLRY SLVSETIP+HRDYQ  Y KER+NY+K+   V+ ELES+KPEF R VDE  K +
Sbjct: 48  IMLLRYLSLVSETIPYHRDYQALYQKERANYKKRSFAVLSELESIKPEFHRRVDEIEKAY 107

Query: 183 AGTQQYQFDAPDRTPYASESSSFEWPFVSNKASSGFQNMRSQSGITAPLSSRK 341
           + TQQ +F+        S +S+ EWP  +  + S      S+  ++ PL  ++
Sbjct: 108 SRTQQVEFN-------GSGTSTLEWPPANKNSYS------SKLSVSLPLPKQE 147


>ref|XP_004161388.1| PREDICTED: AMSH-like ubiquitin thioesterase 3-like [Cucumis
           sativus]
          Length = 507

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 56/127 (44%), Positives = 75/127 (59%)
 Frame = +3

Query: 3   IILLRYSSLVSETIPFHRDYQVSYAKERSNYRKKLSIVIDELESLKPEFQRLVDEPSKVH 182
           IILLR+SSLVSETIP HRDYQ  + K++  Y+KKL  V+DELESLKPEF R V+E  KV+
Sbjct: 48  IILLRFSSLVSETIPRHRDYQAFFPKDKIYYKKKLLNVVDELESLKPEFDRRVNELEKVY 107

Query: 183 AGTQQYQFDAPDRTPYASESSSFEWPFVSNKASSGFQNMRSQSGITAPLSSRKHGNDRSQ 362
              +    D       +   S  E P+V+   S      + Q   + P SSR++ +DR Q
Sbjct: 108 GRPRLPPPDEQGSVSNSFRPSPKEQPYVNGNYSLMLD--QKQHVHSRPQSSRRYSDDRGQ 165

Query: 363 ALPSTSI 383
              S+S+
Sbjct: 166 VSQSSSL 172


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