BLASTX nr result

ID: Panax21_contig00015699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015699
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vin...   279   3e-73
ref|XP_002516301.1| Histone deacetylase, putative [Ricinus commu...   250   2e-64
ref|XP_002307035.1| histone deacetylase [Populus trichocarpa] gi...   248   6e-64
ref|XP_003630282.1| Histone deacetylase [Medicago truncatula] gi...   244   2e-62
ref|XP_002867177.1| hypothetical protein ARALYDRAFT_913072 [Arab...   240   2e-61

>ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vinifera]
           gi|296088531|emb|CBI37522.3| unnamed protein product
           [Vitis vinifera]
          Length = 437

 Score =  279 bits (714), Expect = 3e-73
 Identities = 141/216 (65%), Positives = 175/216 (81%), Gaps = 3/216 (1%)
 Frame = +2

Query: 65  PYAVGNLLLPVRSHVCKWKKHPRFGSDT---GNGCFQKYLRISMKPSSKNIGASISCSYG 235
           P   G+L+L V+ +VCK K H RFGSDT   G+G F+K+L+   +  SK+ G  +SCS  
Sbjct: 9   PSFTGSLVLLVQHNVCKLKNHGRFGSDTKFSGDGYFRKHLKSGRRYFSKSRGPFVSCS-- 66

Query: 236 AEMDPFVPSSTQVVDAKVIYCIAPAMGHNQESHPECHLRVPSIVSALEKMQLTPKFRGSE 415
                 VPS++++ DA+VIYC+APAMGHNQESHPE + RVP+IVSALEKM+L+P FRGSE
Sbjct: 67  -----LVPSTSELSDARVIYCVAPAMGHNQESHPESNFRVPAIVSALEKMELSPMFRGSE 121

Query: 416 IFELQNFRPASVDDITSVHAKAYVSGVEKAMDRASEQGLIFIEDSGPTYATATTFQESLI 595
           I EL +F PASV+DI SVH KAYVSG+EK+MD+AS++G+I+I+ SGPTYATATTFQESL+
Sbjct: 122 ILELHSFSPASVEDIASVHTKAYVSGLEKSMDQASQKGIIYIDGSGPTYATATTFQESLL 181

Query: 596 AAGAGISLVDSVVAASRIGQDPPTGFALIRPPGHHA 703
           AAGAGI+LVDSVVAAS+  QDPP GFALIRPPGHHA
Sbjct: 182 AAGAGITLVDSVVAASKSSQDPPMGFALIRPPGHHA 217


>ref|XP_002516301.1| Histone deacetylase, putative [Ricinus communis]
           gi|223544531|gb|EEF46048.1| Histone deacetylase,
           putative [Ricinus communis]
          Length = 425

 Score =  250 bits (638), Expect = 2e-64
 Identities = 122/181 (67%), Positives = 151/181 (83%)
 Frame = +2

Query: 161 FQKYLRISMKPSSKNIGASISCSYGAEMDPFVPSSTQVVDAKVIYCIAPAMGHNQESHPE 340
           F +++  S    +++I A I CS   E DP +PS  Q+ DA++IY +APAMGHNQESHPE
Sbjct: 25  FSQHVMSSRDHCNRSIRACICCSNSFEKDPNLPSIQQLTDARIIYSVAPAMGHNQESHPE 84

Query: 341 CHLRVPSIVSALEKMQLTPKFRGSEIFELQNFRPASVDDITSVHAKAYVSGVEKAMDRAS 520
            HLRVP+IV+ALEKM+L+ KFRG EI ELQ+F+PAS  DI SVHAKAYV+G+EKAMD+AS
Sbjct: 85  SHLRVPAIVTALEKMELSAKFRGPEIIELQHFKPASAIDIASVHAKAYVAGLEKAMDQAS 144

Query: 521 EQGLIFIEDSGPTYATATTFQESLIAAGAGISLVDSVVAASRIGQDPPTGFALIRPPGHH 700
           ++G+IFI+ +GPTYATATTFQESL+AAGAG++LVDSVVAAS   Q+PPTGFALIRPPGHH
Sbjct: 145 QEGIIFIDGTGPTYATATTFQESLMAAGAGLALVDSVVAASNNSQNPPTGFALIRPPGHH 204

Query: 701 A 703
           A
Sbjct: 205 A 205


>ref|XP_002307035.1| histone deacetylase [Populus trichocarpa]
           gi|222856484|gb|EEE94031.1| histone deacetylase [Populus
           trichocarpa]
          Length = 390

 Score =  248 bits (634), Expect = 6e-64
 Identities = 121/169 (71%), Positives = 146/169 (86%)
 Frame = +2

Query: 197 SKNIGASISCSYGAEMDPFVPSSTQVVDAKVIYCIAPAMGHNQESHPECHLRVPSIVSAL 376
           +K  G SISCSY  + DP +   T   DA+VIY +APAMGHNQE+HPE +LRVP+IVSAL
Sbjct: 5   TKRSGFSISCSYSLDKDPLIEKLT---DARVIYSVAPAMGHNQEAHPESYLRVPAIVSAL 61

Query: 377 EKMQLTPKFRGSEIFELQNFRPASVDDITSVHAKAYVSGVEKAMDRASEQGLIFIEDSGP 556
           EK +LT KFRGSEI ELQ+F+PAS+DDI +VHA+AYV+G+EKAMD+ASEQG+I+I+ SGP
Sbjct: 62  EKAELTSKFRGSEIIELQDFKPASLDDIANVHARAYVAGLEKAMDQASEQGIIYIDGSGP 121

Query: 557 TYATATTFQESLIAAGAGISLVDSVVAASRIGQDPPTGFALIRPPGHHA 703
           TYATATTF+ESL+AAGAG++LVDSVVAAS   Q+PPTGFALIRPPGHHA
Sbjct: 122 TYATATTFRESLVAAGAGLTLVDSVVAASNCSQNPPTGFALIRPPGHHA 170


>ref|XP_003630282.1| Histone deacetylase [Medicago truncatula]
           gi|355524304|gb|AET04758.1| Histone deacetylase
           [Medicago truncatula]
          Length = 420

 Score =  244 bits (622), Expect = 2e-62
 Identities = 126/214 (58%), Positives = 154/214 (71%)
 Frame = +2

Query: 62  PPYAVGNLLLPVRSHVCKWKKHPRFGSDTGNGCFQKYLRISMKPSSKNIGASISCSYGAE 241
           PP + G  +  +  HV KWK H                    K   K +GASI CS    
Sbjct: 11  PPSSSGKSIFLLNHHVNKWKNHRH------------------KVVKKCLGASIYCSSD-- 50

Query: 242 MDPFVPSSTQVVDAKVIYCIAPAMGHNQESHPECHLRVPSIVSALEKMQLTPKFRGSEIF 421
               VPS  Q+  A++IY +AP+MGHNQESHPE H RVP+IV+AL++M+LT KFRGSE+ 
Sbjct: 51  ----VPSIQQLSHARLIYSVAPSMGHNQESHPESHFRVPAIVTALQQMKLTSKFRGSEVI 106

Query: 422 ELQNFRPASVDDITSVHAKAYVSGVEKAMDRASEQGLIFIEDSGPTYATATTFQESLIAA 601
           ELQNF PAS DDI SVHA+AYVSG+EK MD+A E+GLI ++ SGPTYAT+TTFQES++AA
Sbjct: 107 ELQNFEPASTDDIASVHARAYVSGLEKVMDQALEKGLIVVDGSGPTYATSTTFQESIVAA 166

Query: 602 GAGISLVDSVVAASRIGQDPPTGFALIRPPGHHA 703
           GAG++LVDSVVAAS+I +DPPTGFALIRPPGHHA
Sbjct: 167 GAGLALVDSVVAASKIMKDPPTGFALIRPPGHHA 200


>ref|XP_002867177.1| hypothetical protein ARALYDRAFT_913072 [Arabidopsis lyrata subsp.
           lyrata] gi|297313013|gb|EFH43436.1| hypothetical protein
           ARALYDRAFT_913072 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score =  240 bits (613), Expect = 2e-61
 Identities = 116/180 (64%), Positives = 149/180 (82%)
 Frame = +2

Query: 164 QKYLRISMKPSSKNIGASISCSYGAEMDPFVPSSTQVVDAKVIYCIAPAMGHNQESHPEC 343
           +KYL   +KP+    GAS++CS+  E +P +PS  Q+ DA++IY ++ A+GHN++SHPEC
Sbjct: 29  RKYL---LKPN----GASVNCSFSTEKEPLLPSIQQLTDARLIYSVSAALGHNKKSHPEC 81

Query: 344 HLRVPSIVSALEKMQLTPKFRGSEIFELQNFRPASVDDITSVHAKAYVSGVEKAMDRASE 523
             RVP+IV+ALEK +LTPKFRGS++ EL NF+ A+++DI +VH KAYV G+EKAMD AS+
Sbjct: 82  SARVPAIVNALEKNELTPKFRGSQVLELANFKTATIEDIANVHDKAYVFGLEKAMDEASD 141

Query: 524 QGLIFIEDSGPTYATATTFQESLIAAGAGISLVDSVVAASRIGQDPPTGFALIRPPGHHA 703
            GLIFIE SGPTYAT+TTFQ+SLIAAGAG++LVDSV+AASR   DPPTGFALIRPPGHHA
Sbjct: 142 SGLIFIEGSGPTYATSTTFQDSLIAAGAGMALVDSVIAASRNSPDPPTGFALIRPPGHHA 201


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