BLASTX nr result

ID: Panax21_contig00015687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015687
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284060.1| PREDICTED: uncharacterized protein LOC100264...    82   2e-19
emb|CAN82225.1| hypothetical protein VITISV_011873 [Vitis vinifera]    82   2e-19
ref|XP_002273124.1| PREDICTED: uncharacterized protein LOC100256...    82   3e-19
emb|CAN62330.1| hypothetical protein VITISV_029810 [Vitis vinifera]    82   3e-19
ref|XP_002323318.1| predicted protein [Populus trichocarpa] gi|2...    78   4e-18

>ref|XP_002284060.1| PREDICTED: uncharacterized protein LOC100264133 [Vitis vinifera]
          Length = 762

 Score = 81.6 bits (200), Expect(2) = 2e-19
 Identities = 35/54 (64%), Positives = 47/54 (87%)
 Frame = +2

Query: 83  PFSNFRSDKWIVVSVSNYPSDSLRNLAKIKGWQILAVGNSKTPSLCYVEHLLFI 244
           P++NFRS++WI+VSVSNYP+DSLR L KIKGWQ+LA+GNSKTPS   ++  +F+
Sbjct: 102 PYANFRSERWILVSVSNYPTDSLRKLVKIKGWQVLAIGNSKTPSDWSLKGAIFL 155



 Score = 40.0 bits (92), Expect(2) = 2e-19
 Identities = 16/26 (61%), Positives = 23/26 (88%)
 Frame = +3

Query: 3   SQSKTLETIHFPQIDWNSISPISDKS 80
           +Q+K+LE I FPQI+WNS++ +SDKS
Sbjct: 76  TQAKSLEKIEFPQINWNSVALVSDKS 101


>emb|CAN82225.1| hypothetical protein VITISV_011873 [Vitis vinifera]
          Length = 762

 Score = 81.6 bits (200), Expect(2) = 2e-19
 Identities = 35/54 (64%), Positives = 47/54 (87%)
 Frame = +2

Query: 83  PFSNFRSDKWIVVSVSNYPSDSLRNLAKIKGWQILAVGNSKTPSLCYVEHLLFI 244
           P++NFRS++WI+VSVSNYP+DSLR L KIKGWQ+LA+GNSKTPS   ++  +F+
Sbjct: 102 PYANFRSERWILVSVSNYPTDSLRKLVKIKGWQVLAIGNSKTPSDWSLKGAIFL 155



 Score = 40.0 bits (92), Expect(2) = 2e-19
 Identities = 16/26 (61%), Positives = 23/26 (88%)
 Frame = +3

Query: 3   SQSKTLETIHFPQIDWNSISPISDKS 80
           +Q+K+LE I FPQI+WNS++ +SDKS
Sbjct: 76  TQAKSLEKIEFPQINWNSVALVSDKS 101


>ref|XP_002273124.1| PREDICTED: uncharacterized protein LOC100256796 [Vitis vinifera]
          Length = 753

 Score = 81.6 bits (200), Expect(2) = 3e-19
 Identities = 36/54 (66%), Positives = 47/54 (87%)
 Frame = +2

Query: 83  PFSNFRSDKWIVVSVSNYPSDSLRNLAKIKGWQILAVGNSKTPSLCYVEHLLFI 244
           PF+ FRS++WIVVSVSNYPSDSLR+L KIKGWQ+LAVGNS+TP+   ++  +F+
Sbjct: 92  PFATFRSERWIVVSVSNYPSDSLRSLVKIKGWQVLAVGNSRTPANWELKGAIFL 145



 Score = 39.7 bits (91), Expect(2) = 3e-19
 Identities = 18/32 (56%), Positives = 25/32 (78%)
 Frame = +3

Query: 3   SQSKTLETIHFPQIDWNSISPISDKSTPFPIF 98
           S+SK+L+ I FP+I ++SI P SDKS+PF  F
Sbjct: 65  SRSKSLKPIQFPKISFSSIPPNSDKSSPFATF 96


>emb|CAN62330.1| hypothetical protein VITISV_029810 [Vitis vinifera]
          Length = 690

 Score = 81.6 bits (200), Expect(2) = 3e-19
 Identities = 36/54 (66%), Positives = 47/54 (87%)
 Frame = +2

Query: 83  PFSNFRSDKWIVVSVSNYPSDSLRNLAKIKGWQILAVGNSKTPSLCYVEHLLFI 244
           PF+ FRS++WIVVSVSNYPSDSLR+L KIKGWQ+LAVGNS+TP+   ++  +F+
Sbjct: 96  PFATFRSERWIVVSVSNYPSDSLRSLVKIKGWQVLAVGNSRTPANWELKGAIFL 149



 Score = 39.7 bits (91), Expect(2) = 3e-19
 Identities = 18/32 (56%), Positives = 25/32 (78%)
 Frame = +3

Query: 3   SQSKTLETIHFPQIDWNSISPISDKSTPFPIF 98
           S+SK+L+ I FP+I ++SI P SDKS+PF  F
Sbjct: 69  SRSKSLKPIQFPKISFSSIPPNSDKSSPFATF 100


>ref|XP_002323318.1| predicted protein [Populus trichocarpa] gi|222867948|gb|EEF05079.1|
           predicted protein [Populus trichocarpa]
          Length = 771

 Score = 77.8 bits (190), Expect(2) = 4e-18
 Identities = 32/44 (72%), Positives = 42/44 (95%)
 Frame = +2

Query: 83  PFSNFRSDKWIVVSVSNYPSDSLRNLAKIKGWQILAVGNSKTPS 214
           P++NFRS+KWIVVSVS+YPSDSL+ L +IKGWQ+LA+GNS+TP+
Sbjct: 112 PYANFRSEKWIVVSVSHYPSDSLKKLVRIKGWQLLAIGNSRTPN 155



 Score = 39.7 bits (91), Expect(2) = 4e-18
 Identities = 18/33 (54%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
 Frame = +3

Query: 3   SQSKTLE-TIHFPQIDWNSISPISDKSTPFPIF 98
           SQ++ L+ T HFP+IDWN+I  I+DKS+P+  F
Sbjct: 84  SQAQPLDKTHHFPRIDWNNIPAITDKSSPYANF 116


Top