BLASTX nr result

ID: Panax21_contig00015681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015681
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26953.3| unnamed protein product [Vitis vinifera]               82   3e-14
ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vi...    80   2e-13
ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vi...    68   9e-10
emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]    68   9e-10
ref|XP_002892977.1| nucleotidyltransferase family protein [Arabi...    65   7e-09

>emb|CBI26953.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 50/141 (35%), Positives = 75/141 (53%)
 Frame = +2

Query: 2   RKQETDGREGEKFDMRRTVEDYKHAVWAYSFWIPTMLIHVCHIRRKDLPHXXXXXXXXXX 181
           RK+ +  +EGE+FD+R TV+D+K+ VW YS W   M IHVCHIRRK++P+          
Sbjct: 435 RKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPP 494

Query: 182 XXXXXASESRLLPKRQRLDSSQVNVAVSEKKRKQDEVTGGVGLKEPMCMAVGNNYADFEG 361
                A E   + K    +S         +KRK+DE+  G   +E   + V N  +D +G
Sbjct: 495 QPMKVAGEQGQVSKPMGFNS---------QKRKRDEIDAGSHPRESTSL-VENVESDLQG 544

Query: 362 DSRAKRQGEADVEDALTNASC 424
           + + + Q E +V D+LT   C
Sbjct: 545 EVKLE-QVEVNVGDSLTKVIC 564


>ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 587

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 49/137 (35%), Positives = 74/137 (54%)
 Frame = +2

Query: 2   RKQETDGREGEKFDMRRTVEDYKHAVWAYSFWIPTMLIHVCHIRRKDLPHXXXXXXXXXX 181
           RK+ +  +EGE+FD+R TV+D+K+ VW YS W   M IHVCHIRRK++P+          
Sbjct: 435 RKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPP 494

Query: 182 XXXXXASESRLLPKRQRLDSSQVNVAVSEKKRKQDEVTGGVGLKEPMCMAVGNNYADFEG 361
                A E   + K    +S         +KRK+DE+  G   +E   + V N  +D +G
Sbjct: 495 QPMKVAGEQGQVSKPMGFNS---------QKRKRDEIDAGSHPRESTSL-VENVESDLQG 544

Query: 362 DSRAKRQGEADVEDALT 412
           + + + Q E +V D+LT
Sbjct: 545 EVKLE-QVEVNVGDSLT 560


>ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 757

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/109 (32%), Positives = 56/109 (51%)
 Frame = +2

Query: 2   RKQETDGREGEKFDMRRTVEDYKHAVWAYSFWIPTMLIHVCHIRRKDLPHXXXXXXXXXX 181
           RKQ     EGE+FD+R TV+++KH+V  Y+ W P M IHV H+RR+++P+          
Sbjct: 436 RKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPS 495

Query: 182 XXXXXASESRLLPKRQRLDSSQVNVAVSEKKRKQDEVTGGVGLKEPMCM 328
                ASE R + +      + +  A   KKRK+++       +   C+
Sbjct: 496 RPTKVASERRRVLEPNVSTQAVLEGAEDSKKRKREDENVETNSRNAKCL 544


>emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
          Length = 1097

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/109 (32%), Positives = 56/109 (51%)
 Frame = +2

Query: 2   RKQETDGREGEKFDMRRTVEDYKHAVWAYSFWIPTMLIHVCHIRRKDLPHXXXXXXXXXX 181
           RKQ     EGE+FD+R TV+++KH+V  Y+ W P M IHV H+RR+++P+          
Sbjct: 616 RKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPS 675

Query: 182 XXXXXASESRLLPKRQRLDSSQVNVAVSEKKRKQDEVTGGVGLKEPMCM 328
                ASE R + +      + +  A   KKRK+++       +   C+
Sbjct: 676 RPTKVASERRRVLEPNVSTQAVLEGAEDSKKRKREDENVETNSRNAKCL 724


>ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297338819|gb|EFH69236.1|
           nucleotidyltransferase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 716

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = +2

Query: 2   RKQETDGREGEKFDMRRTVEDYKHAVWAYSFWIPTMLIHVCHIRRKDLPH 151
           RKQ     EGE+FD+RRTVE++KH V AY+ WIP M I V HI+R+ LP+
Sbjct: 431 RKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVSHIKRRSLPN 480


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