BLASTX nr result

ID: Panax21_contig00015607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015607
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU27355.1| polygalacturonase inhibiting protein [Panax ginseng]   273   2e-71
gb|ABD46739.1| leucine-rich repeat protein [Nicotiana tabacum]        268   3e-70
ref|NP_001240925.1| DNA-damage-repair/toleration protein DRT100-...   254   7e-66
ref|XP_002513458.1| serine-threonine protein kinase, plant-type,...   254   9e-66
ref|XP_002299240.1| predicted protein [Populus trichocarpa] gi|2...   253   1e-65

>gb|ACU27355.1| polygalacturonase inhibiting protein [Panax ginseng]
          Length = 366

 Score =  273 bits (697), Expect = 2e-71
 Identities = 142/173 (82%), Positives = 149/173 (86%), Gaps = 3/173 (1%)
 Frame = +1

Query: 55  ITAILLASAAAVICCPPSDRAALLDFRTALNESHLGIFN-TWKGNDCCHHWYGVSCDTT- 228
           ITAILLASAAAVICCPPSDRAALLDFRTALNESHLGIF  + KGNDCCHHW  +S  T  
Sbjct: 7   ITAILLASAAAVICCPPSDRAALLDFRTALNESHLGIFKYSGKGNDCCHHWIRMSAATRP 66

Query: 229 NGRVADITLRGESEDPIFQRAHRTGYMTGTISPA-ICKLTWLSSITIADWKGISGPIPSC 405
             RVADITLRGESEDPIFQR HRT Y+TG+  P+ +     L   T+ADWKGISGPIPSC
Sbjct: 67  TDRVADITLRGESEDPIFQRDHRTAYITGSGLPSYLWTYLALEVSTMADWKGISGPIPSC 126

Query: 406 ITYLPYLRILDLIGNRINGQIPADIGRLSRLTVLNVADNNITGWIPRSIANLS 564
           ITYLPYLRILDLIGNRINGQIPADIGRLSRLTVLNVADNNITGWIPRSIANLS
Sbjct: 127 ITYLPYLRILDLIGNRINGQIPADIGRLSRLTVLNVADNNITGWIPRSIANLS 179



 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 37/88 (42%), Positives = 52/88 (59%)
 Frame = +1

Query: 295 RTGYMTGTISPAICKLTWLSSITIADWKGISGPIPSCITYLPYLRILDLIGNRINGQIPA 474
           R   + GTI     KL  LS   ++  + ISGPIP+ I+Y+  L  LDL  NRI+G IP 
Sbjct: 187 RNNQIRGTIPRNFGKLRMLSRALLSGNR-ISGPIPNSISYVYRLSDLDLSLNRISGSIPP 245

Query: 475 DIGRLSRLTVLNVADNNITGWIPRSIAN 558
            +G++  L  LN+  NNI+G IP ++ N
Sbjct: 246 SLGKMGVLATLNLDGNNISGLIPPTLIN 273


>gb|ABD46739.1| leucine-rich repeat protein [Nicotiana tabacum]
          Length = 365

 Score =  268 bits (686), Expect = 3e-70
 Identities = 127/170 (74%), Positives = 147/170 (86%)
 Frame = +1

Query: 55  ITAILLASAAAVICCPPSDRAALLDFRTALNESHLGIFNTWKGNDCCHHWYGVSCDTTNG 234
           IT +LL   +AV  CPPSDRAALL FR ALNES LGIFNTW+G +CCH WYGVSCD    
Sbjct: 8   ITTLLLGIISAVHSCPPSDRAALLAFRAALNESSLGIFNTWQGYECCHGWYGVSCDQLTH 67

Query: 235 RVADITLRGESEDPIFQRAHRTGYMTGTISPAICKLTWLSSITIADWKGISGPIPSCITY 414
           RVADI LRGESEDP+FQ+AH+TGYMTGTISPAICKL  LSS+TIADWKGI+GPIPSC+T 
Sbjct: 68  RVADINLRGESEDPLFQKAHKTGYMTGTISPAICKLERLSSLTIADWKGITGPIPSCVTS 127

Query: 415 LPYLRILDLIGNRINGQIPADIGRLSRLTVLNVADNNITGWIPRSIANLS 564
           LP+LRI+DLIGN++ G+IP++IGRLSRLTVLNVADN ++G IPRS+ NLS
Sbjct: 128 LPFLRIIDLIGNKLTGEIPSEIGRLSRLTVLNVADNCLSGRIPRSLTNLS 177


>ref|NP_001240925.1| DNA-damage-repair/toleration protein DRT100-like precursor [Glycine
           max] gi|223452540|gb|ACM89597.1| leucine rich repeat
           protein [Glycine max]
          Length = 368

 Score =  254 bits (649), Expect = 7e-66
 Identities = 123/170 (72%), Positives = 140/170 (82%)
 Frame = +1

Query: 55  ITAILLASAAAVICCPPSDRAALLDFRTALNESHLGIFNTWKGNDCCHHWYGVSCDTTNG 234
           +  + +A ++ V  CPPSDRAALL F+ AL+E +LGIFN+W G DCCH WYGVSCD    
Sbjct: 11  LLVLFMAMSSGVRSCPPSDRAALLAFKAALHEPYLGIFNSWTGADCCHKWYGVSCDQETR 70

Query: 235 RVADITLRGESEDPIFQRAHRTGYMTGTISPAICKLTWLSSITIADWKGISGPIPSCITY 414
           RVADI LRGESE+PIF+RAHRTGYMTG ISPAICKL  LSSITIADWKGISG IP CIT 
Sbjct: 71  RVADINLRGESEEPIFERAHRTGYMTGYISPAICKLARLSSITIADWKGISGEIPRCITT 130

Query: 415 LPYLRILDLIGNRINGQIPADIGRLSRLTVLNVADNNITGWIPRSIANLS 564
           LP+LRI+DLIGNR++G IPA IGRL RLTVLNVADN I+G IP S+ANLS
Sbjct: 131 LPFLRIVDLIGNRLSGSIPAGIGRLHRLTVLNVADNLISGTIPTSLANLS 180


>ref|XP_002513458.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223547366|gb|EEF48861.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 366

 Score =  254 bits (648), Expect = 9e-66
 Identities = 123/166 (74%), Positives = 139/166 (83%)
 Frame = +1

Query: 67  LLASAAAVICCPPSDRAALLDFRTALNESHLGIFNTWKGNDCCHHWYGVSCDTTNGRVAD 246
           L+ +A  V  C PSDRAALL F+ AL+E +LGIFN+W G DCCH WYG+SCD   GRVAD
Sbjct: 14  LMLTATTVTSCLPSDRAALLAFKAALHEPYLGIFNSWAGPDCCHKWYGISCDQETGRVAD 73

Query: 247 ITLRGESEDPIFQRAHRTGYMTGTISPAICKLTWLSSITIADWKGISGPIPSCITYLPYL 426
           ITLRGESEDPIFQ+A R+GYMTGTIS +ICKL  LSS+TIADWKGISG IP CIT LP+L
Sbjct: 74  ITLRGESEDPIFQKARRSGYMTGTISSSICKLERLSSLTIADWKGISGEIPRCITSLPFL 133

Query: 427 RILDLIGNRINGQIPADIGRLSRLTVLNVADNNITGWIPRSIANLS 564
           RILDLIGN+I+G IPADIGRL RLTVLNVADN I+G IPRS+ NLS
Sbjct: 134 RILDLIGNKISGDIPADIGRLHRLTVLNVADNLISGEIPRSLTNLS 179


>ref|XP_002299240.1| predicted protein [Populus trichocarpa] gi|222846498|gb|EEE84045.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  253 bits (647), Expect = 1e-65
 Identities = 119/169 (70%), Positives = 141/169 (83%)
 Frame = +1

Query: 58  TAILLASAAAVICCPPSDRAALLDFRTALNESHLGIFNTWKGNDCCHHWYGVSCDTTNGR 237
           T  +  S + V  CP SDRAALL F+ AL+E +LGIFN+W G DCCH+WYGV CD    R
Sbjct: 12  TLTIFISTSTVRSCPASDRAALLAFKAALHEPYLGIFNSWTGTDCCHNWYGVMCDMETRR 71

Query: 238 VADITLRGESEDPIFQRAHRTGYMTGTISPAICKLTWLSSITIADWKGISGPIPSCITYL 417
           VADI LRGESEDPIFQ+A R+GYMTG+ISP+ICKL  LSS+TI+DWKGISGPIP+CIT L
Sbjct: 72  VADINLRGESEDPIFQKAGRSGYMTGSISPSICKLERLSSLTISDWKGISGPIPACITSL 131

Query: 418 PYLRILDLIGNRINGQIPADIGRLSRLTVLNVADNNITGWIPRSIANLS 564
           P+LRI+DLIGNRI+G+IPADIGRL R+TVLN+ADN +TG IPRS+ NLS
Sbjct: 132 PFLRIIDLIGNRISGEIPADIGRLERMTVLNIADNLVTGRIPRSLTNLS 180


Top