BLASTX nr result

ID: Panax21_contig00015593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015593
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri...   119   2e-25
emb|CAN82758.1| hypothetical protein VITISV_013349 [Vitis vinifera]   111   5e-23
emb|CBI23407.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_003633901.1| PREDICTED: CCR4-NOT transcription complex su...   110   1e-22
emb|CBI16596.3| unnamed protein product [Vitis vinifera]              110   1e-22

>ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis]
            gi|223548824|gb|EEF50313.1| ccr4-not transcription
            complex, putative [Ricinus communis]
          Length = 2330

 Score =  119 bits (299), Expect = 2e-25
 Identities = 69/146 (47%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
 Frame = +1

Query: 1    QRVYEDFVRLPWQNQSSQNSNVAVVGPSTS-VSGGLSQGYGSASGQLNPGIYSSGLGNTG 177
            QRVYEDFVRLPWQNQS Q S+   +G STS VS  L+  YGS SGQLNPG YSS  GN G
Sbjct: 1427 QRVYEDFVRLPWQNQSGQGSHTIPMGSSTSAVSTALAGAYGSGSGQLNPG-YSSAPGNVG 1485

Query: 178  MGAVAHSFDLGPEELDSGPAKQLSVSSMHAGMADGLGQHNFENDXXXXXXXXXXXXDLQS 357
              AV+ + D+G +  +S  A  LS SS+H G  DG  Q N EN                S
Sbjct: 1486 FEAVSRTLDMGSDATESNSAAILSSSSIHIGATDGAIQPNSENSATSVSFSSAAPASEHS 1545

Query: 358  AEPPNAVKESGVSAQTLPSVSATEQL 435
             +  + VKE G+S+Q + S +A+++L
Sbjct: 1546 GDTSDTVKELGISSQPISSSAASDRL 1571


>emb|CAN82758.1| hypothetical protein VITISV_013349 [Vitis vinifera]
          Length = 941

 Score =  111 bits (278), Expect = 5e-23
 Identities = 65/150 (43%), Positives = 85/150 (56%), Gaps = 4/150 (2%)
 Frame = +1

Query: 1   QRVYEDFVRLPWQNQSSQNSNVAVVGPSTSVSG----GLSQGYGSASGQLNPGIYSSGLG 168
           QRVYEDFVR PWQNQS Q+SN    GP  + SG    GLS+ Y S+SGQL+PG YS+G G
Sbjct: 20  QRVYEDFVRFPWQNQSGQSSNAVPAGPPAASSGPGSSGLSRAYASSSGQLSPGFYSTGTG 79

Query: 169 NTGMGAVAHSFDLGPEELDSGPAKQLSVSSMHAGMADGLGQHNFENDXXXXXXXXXXXXD 348
            TG+ A     DL  E++D   A+ LS SS   G+ DG+  H  + +            +
Sbjct: 80  ATGLSA-TQPLDLISEDMDPSSAQFLSGSSSRIGVMDGVSPHGSKLN-SVSFPSVAPTPE 137

Query: 349 LQSAEPPNAVKESGVSAQTLPSVSATEQLG 438
           + + E  N  KE G +A +LP+ S TE  G
Sbjct: 138 VHAVEASNVGKELGAAALSLPAASTTEHPG 167


>emb|CBI23407.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score =  111 bits (277), Expect = 7e-23
 Identities = 65/150 (43%), Positives = 84/150 (56%), Gaps = 4/150 (2%)
 Frame = +1

Query: 1   QRVYEDFVRLPWQNQSSQNSNVAVVGPSTSVSG----GLSQGYGSASGQLNPGIYSSGLG 168
           QRVYEDFVR PWQNQS Q+SN    GP  + SG    GLS+ Y S+SGQL+PG YS+G G
Sbjct: 20  QRVYEDFVRFPWQNQSGQSSNAVPAGPPAASSGPGSSGLSRAYASSSGQLSPGFYSTGTG 79

Query: 169 NTGMGAVAHSFDLGPEELDSGPAKQLSVSSMHAGMADGLGQHNFENDXXXXXXXXXXXXD 348
            TG+ A     DL  E++D   A+ LS SS   G+ DG+  H  + +            +
Sbjct: 80  ATGLSA-TQPLDLISEDMDPSSAQFLSGSSSRIGVMDGVSPHGSKLN-SVSFPSVAPTPE 137

Query: 349 LQSAEPPNAVKESGVSAQTLPSVSATEQLG 438
           +   E  N  KE G +A +LP+ S TE  G
Sbjct: 138 VHPVEASNVGKELGAAALSLPAASTTEHSG 167


>ref|XP_003633901.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis
            vinifera]
          Length = 2333

 Score =  110 bits (275), Expect = 1e-22
 Identities = 65/147 (44%), Positives = 87/147 (59%), Gaps = 1/147 (0%)
 Frame = +1

Query: 1    QRVYEDFVRLPWQNQSSQNSNVAVVGPSTSVSGGLSQGYGSASGQLNPGIYSSGLGNTGM 180
            Q+VYE FV+LP QNQS++ SN+     +     G S  +GSA  QL+P IYSS  GN+G+
Sbjct: 1427 QQVYEGFVQLPRQNQSNEGSNMLPADSAPPGGAGQSVSHGSALVQLDPTIYSSSPGNSGL 1486

Query: 181  GAVAHSFDLGPEELDSGPAKQLSVSSMHAGMADGLGQHNFEND-XXXXXXXXXXXXDLQS 357
             AV+ S D   E+L+S   + LS SS H GM DG+ +H  END             DL S
Sbjct: 1487 MAVSQSLDFVTEDLESTSVQLLSASSTHMGMGDGVIKHISENDSVVASFPSTASASDLSS 1546

Query: 358  AEPPNAVKESGVSAQTLPSVSATEQLG 438
             EP +AVKE   ++Q+ PS  A+E+LG
Sbjct: 1547 VEPSDAVKELVTASQSFPSTVASERLG 1573


>emb|CBI16596.3| unnamed protein product [Vitis vinifera]
          Length = 2452

 Score =  110 bits (275), Expect = 1e-22
 Identities = 65/147 (44%), Positives = 87/147 (59%), Gaps = 1/147 (0%)
 Frame = +1

Query: 1    QRVYEDFVRLPWQNQSSQNSNVAVVGPSTSVSGGLSQGYGSASGQLNPGIYSSGLGNTGM 180
            Q+VYE FV+LP QNQS++ SN+     +     G S  +GSA  QL+P IYSS  GN+G+
Sbjct: 1518 QQVYEGFVQLPRQNQSNEGSNMLPADSAPPGGAGQSVSHGSALVQLDPTIYSSSPGNSGL 1577

Query: 181  GAVAHSFDLGPEELDSGPAKQLSVSSMHAGMADGLGQHNFEND-XXXXXXXXXXXXDLQS 357
             AV+ S D   E+L+S   + LS SS H GM DG+ +H  END             DL S
Sbjct: 1578 MAVSQSLDFVTEDLESTSVQLLSASSTHMGMGDGVIKHISENDSVVASFPSTASASDLSS 1637

Query: 358  AEPPNAVKESGVSAQTLPSVSATEQLG 438
             EP +AVKE   ++Q+ PS  A+E+LG
Sbjct: 1638 VEPSDAVKELVTASQSFPSTVASERLG 1664


Top