BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015586
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...   372   e-101
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...   360   2e-97
emb|CBI39422.3| unnamed protein product [Vitis vinifera]              360   2e-97
ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsi...   349   4e-94
ref|NP_180760.2| DNA topoisomerase III [Arabidopsis thaliana] gi...   348   7e-94

>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223544485|gb|EEF46004.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 865

 Score =  372 bits (954), Expect = e-101
 Identities = 178/210 (84%), Positives = 193/210 (91%), Gaps = 1/210 (0%)
 Frame = +3

Query: 150 VLMVAEKPSIALSIATALSGGQMSSRRGSTEVHEFEAMFMGFKAHYKVTSVIGHVFSVDF 329
           VLMVAEKPSIALSIA+ALS GQMSS++G TEVHEF+ MF+GF+AHYKVTSVIGH+FSVDF
Sbjct: 6   VLMVAEKPSIALSIASALSHGQMSSKKGGTEVHEFDGMFLGFQAHYKVTSVIGHIFSVDF 65

Query: 330 PAAYQDWMATDPLSLFQAPVLKTESNPKAHIRKHLSQEARGCGHLVLWLDCDREGENICF 509
           P  YQDW A DP+ LFQAP++K ESNPK HIR+HLSQEARGCGHLVLWLDCDREGENICF
Sbjct: 66  PQKYQDWTANDPMDLFQAPIVKAESNPKVHIRRHLSQEARGCGHLVLWLDCDREGENICF 125

Query: 510 EVIECAGFHANDG-RRVYRARFSSVTEKDISKAMNNLVEPNRDEALAVDARQEIDLKVGV 686
           EVIEC GFH ND  RRVYRARFSSV EKDI KAM+NLV+PNRDEALAVDARQEIDLKVGV
Sbjct: 126 EVIECTGFHLNDSRRRVYRARFSSVAEKDILKAMDNLVQPNRDEALAVDARQEIDLKVGV 185

Query: 687 AFTRFQTSYFQGKYGNLDASVISYGPCQTP 776
           AFTRFQTS+FQGKYGNLD+ VISYGPCQTP
Sbjct: 186 AFTRFQTSFFQGKYGNLDSRVISYGPCQTP 215


>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score =  360 bits (923), Expect = 2e-97
 Identities = 178/212 (83%), Positives = 187/212 (88%), Gaps = 3/212 (1%)
 Frame = +3

Query: 150 VLMVAEKPSIALSIATALSGGQMSSRRG--STEVHEFEAMFMGFKAHYKVTSVIGHVFSV 323
           +L VAEKPSIALSIA+ALSGG MS+RRG  STEVHEF   F G  A YKVTSVIGHVFSV
Sbjct: 32  ILQVAEKPSIALSIASALSGGHMSTRRGGSSTEVHEFNGTFRGSNAQYKVTSVIGHVFSV 91

Query: 324 DFPAAYQDWMATDPLSLFQAPVLKTESNPKAHIRKHLSQEARGCGHLVLWLDCDREGENI 503
           DFPA YQDW  TDPL LFQAP+LK ESNPKAHIR+HLSQEAR CGHLVLWLDCDREGENI
Sbjct: 92  DFPAKYQDWTVTDPLDLFQAPILKAESNPKAHIRRHLSQEARDCGHLVLWLDCDREGENI 151

Query: 504 CFEVIECAGFHANDG-RRVYRARFSSVTEKDISKAMNNLVEPNRDEALAVDARQEIDLKV 680
           CFEV+EC GFH N+  RRVYRARFSSVTEKDI KAM+NLVEPN DEA AVDARQEIDLKV
Sbjct: 152 CFEVVECTGFHGNEARRRVYRARFSSVTEKDILKAMDNLVEPNEDEARAVDARQEIDLKV 211

Query: 681 GVAFTRFQTSYFQGKYGNLDASVISYGPCQTP 776
           GVAFTRFQTSYFQGKYGNLD+ VISYGPCQTP
Sbjct: 212 GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTP 243


>emb|CBI39422.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  360 bits (923), Expect = 2e-97
 Identities = 178/212 (83%), Positives = 187/212 (88%), Gaps = 3/212 (1%)
 Frame = +3

Query: 150 VLMVAEKPSIALSIATALSGGQMSSRRG--STEVHEFEAMFMGFKAHYKVTSVIGHVFSV 323
           +L VAEKPSIALSIA+ALSGG MS+RRG  STEVHEF   F G  A YKVTSVIGHVFSV
Sbjct: 48  ILQVAEKPSIALSIASALSGGHMSTRRGGSSTEVHEFNGTFRGSNAQYKVTSVIGHVFSV 107

Query: 324 DFPAAYQDWMATDPLSLFQAPVLKTESNPKAHIRKHLSQEARGCGHLVLWLDCDREGENI 503
           DFPA YQDW  TDPL LFQAP+LK ESNPKAHIR+HLSQEAR CGHLVLWLDCDREGENI
Sbjct: 108 DFPAKYQDWTVTDPLDLFQAPILKAESNPKAHIRRHLSQEARDCGHLVLWLDCDREGENI 167

Query: 504 CFEVIECAGFHANDG-RRVYRARFSSVTEKDISKAMNNLVEPNRDEALAVDARQEIDLKV 680
           CFEV+EC GFH N+  RRVYRARFSSVTEKDI KAM+NLVEPN DEA AVDARQEIDLKV
Sbjct: 168 CFEVVECTGFHGNEARRRVYRARFSSVTEKDILKAMDNLVEPNEDEARAVDARQEIDLKV 227

Query: 681 GVAFTRFQTSYFQGKYGNLDASVISYGPCQTP 776
           GVAFTRFQTSYFQGKYGNLD+ VISYGPCQTP
Sbjct: 228 GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTP 259


>ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327049|gb|EFH57469.1| DNA topoisomerase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 865

 Score =  349 bits (895), Expect = 4e-94
 Identities = 172/211 (81%), Positives = 185/211 (87%), Gaps = 1/211 (0%)
 Frame = +3

Query: 147 KVLMVAEKPSIALSIATALSGGQMSSRRGSTEVHEFEAMFMGFKAHYKVTSVIGHVFSVD 326
           +VLMVAEKPSIALSIA+ LS GQMS+RRGSTEVHEF+ MF GFKAHY+VTSVIGHVFSVD
Sbjct: 6   RVLMVAEKPSIALSIASVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGHVFSVD 65

Query: 327 FPAAYQDWMATDPLSLFQAPVLKTESNPKAHIRKHLSQEARGCGHLVLWLDCDREGENIC 506
           FP  YQ+W   DP  LF AP+LK ESNPKAHI +HLS EARGC ++VLWLDCDREGENIC
Sbjct: 66  FPEKYQNWATIDPQDLFDAPILKKESNPKAHICRHLSNEARGCSYMVLWLDCDREGENIC 125

Query: 507 FEVIECAGFHANDG-RRVYRARFSSVTEKDISKAMNNLVEPNRDEALAVDARQEIDLKVG 683
           FEVIE  GF   D  R+VYRARFSSVTEKDISKAM+NLVEPNRDEALAVDARQEIDLKVG
Sbjct: 126 FEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQEIDLKVG 185

Query: 684 VAFTRFQTSYFQGKYGNLDASVISYGPCQTP 776
           VAF+RFQTSYFQGKY NLD  VISYGPCQTP
Sbjct: 186 VAFSRFQTSYFQGKYQNLDCRVISYGPCQTP 216


>ref|NP_180760.2| DNA topoisomerase III [Arabidopsis thaliana]
           gi|330253525|gb|AEC08619.1| DNA topoisomerase III
           [Arabidopsis thaliana]
          Length = 865

 Score =  348 bits (893), Expect = 7e-94
 Identities = 171/211 (81%), Positives = 185/211 (87%), Gaps = 1/211 (0%)
 Frame = +3

Query: 147 KVLMVAEKPSIALSIATALSGGQMSSRRGSTEVHEFEAMFMGFKAHYKVTSVIGHVFSVD 326
           +VLMVAEKPSIALSIA+ LS GQMS+RRGSTEVHEF+ MF GFKAHY+VTSVIGHVFSVD
Sbjct: 6   RVLMVAEKPSIALSIASVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGHVFSVD 65

Query: 327 FPAAYQDWMATDPLSLFQAPVLKTESNPKAHIRKHLSQEARGCGHLVLWLDCDREGENIC 506
           FP  YQ+W   DP  LF AP++K ESNPKAHI +HLS EARGC ++VLWLDCDREGENIC
Sbjct: 66  FPEKYQNWATIDPQDLFDAPIIKKESNPKAHICRHLSNEARGCSYMVLWLDCDREGENIC 125

Query: 507 FEVIECAGFHANDG-RRVYRARFSSVTEKDISKAMNNLVEPNRDEALAVDARQEIDLKVG 683
           FEVIE  GF   D  R+VYRARFSSVTEKDISKAM+NLVEPNRDEALAVDARQEIDLKVG
Sbjct: 126 FEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQEIDLKVG 185

Query: 684 VAFTRFQTSYFQGKYGNLDASVISYGPCQTP 776
           VAF+RFQTSYFQGKY NLD  VISYGPCQTP
Sbjct: 186 VAFSRFQTSYFQGKYQNLDCRVISYGPCQTP 216