BLASTX nr result

ID: Panax21_contig00015575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015575
         (1822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   412   e-112
gb|ABK94910.1| unknown [Populus trichocarpa]                          408   e-111
emb|CBI37313.3| unnamed protein product [Vitis vinifera]              393   e-107
ref|XP_003551419.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   388   e-105
ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|2...   387   e-105

>ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera]
          Length = 470

 Score =  412 bits (1058), Expect = e-112
 Identities = 210/397 (52%), Positives = 257/397 (64%), Gaps = 1/397 (0%)
 Frame = +3

Query: 87   EQISGSFVCCVCLDLLYKPIVLACGHVSCFWCVHKSMNGLRESHCPTCRNPYHYFPNICQ 266
            ++IS SF CCVCLDLLYKPIVLACGH+SCFWCVH SM+G  ESHCP CRNPY +FP ICQ
Sbjct: 16   DEISRSFTCCVCLDLLYKPIVLACGHISCFWCVHYSMDGAHESHCPICRNPYSHFPTICQ 75

Query: 267  MLHFLLLKIYPTTYNRRETQTLECERANDCFSPELNDLVCPSHNNDKLNRLGDTGQSSLT 446
            MLHF+LLK+YP  Y RRE QTLE E    CFSP  +     SH   KL    D    S+T
Sbjct: 76   MLHFMLLKMYPVAYKRREKQTLEREEETRCFSPRFDAYGGGSHTYKKLKIEADPADPSIT 135

Query: 447  NSKAHLSSYPCSFEDGEGCAN-MEQVKLSPPFQGIGGNHPNENSPGGFEVNSSNLAVKEN 623
              +  L     S    +  A+ M++  +S P   +    P      G     + LA +EN
Sbjct: 136  VFEFKLCPDSSSNRVKKHFADLMQRQPVSLPQDFV---IPISKQTSGGNPQGATLADEEN 192

Query: 624  KLCEGNSIETHVQVSIVDMLCVACKELLFRPLVLNCGHVYCETCICIPANETLRCQVCQS 803
             + + N  +T  Q+SI D+ C ACK+LLFRP+VLNCGHVYCETC  IP +E  RC+VCQ 
Sbjct: 193  VVLKNNLDQTCEQLSIADVQCTACKQLLFRPVVLNCGHVYCETCFNIPVDERFRCKVCQV 252

Query: 804  LHPSGFPKVCLELHHFLEGQFPTEYAERRVKTQIKEVDFQQETSTTRSAEAGKEGVHFSF 983
            LHPSGFPKVCLEL +FLE QFP EYA RR   Q+K V      ST  S  +G +G  +S 
Sbjct: 253  LHPSGFPKVCLELDNFLEEQFPEEYALRREAVQLKAVHLHDAPSTW-SKNSGIQGFKWSS 311

Query: 984  PSEENFWPSWGDHNLNVHFGVGCDFCGMYPITGSRYKCKDCVEAIGFDLCGECYNTRSKL 1163
              +E +     D+   +H   GCD CGMYPI G RY+CKDC E IGFDLCG+CYNT SKL
Sbjct: 312  VPKEEYSTWLRDNGPKIHPCAGCDSCGMYPIVGDRYRCKDCKEKIGFDLCGDCYNTNSKL 371

Query: 1164 PGRFNQQHTPEHRFEIVRSNSVRSMILRLIRGQVEDG 1274
            PGRFNQQHTPEH+FE+V +  ++  ++RL+  Q+ DG
Sbjct: 372  PGRFNQQHTPEHKFELV-NWKLKQEMMRLMVEQLGDG 407


>gb|ABK94910.1| unknown [Populus trichocarpa]
          Length = 469

 Score =  408 bits (1049), Expect = e-111
 Identities = 215/407 (52%), Positives = 259/407 (63%), Gaps = 9/407 (2%)
 Frame = +3

Query: 84   DEQISGSFVCCVCLDLLYKPIVLACGHVSCFWCVHKSMNGLRESHCPTCRNPYHYFPNIC 263
            +E+ S SF C VCLDLLYKPIVL+CGH+SCFWCVHKSM+GLRES+CP CR+PY++FP IC
Sbjct: 30   EEEFSDSFRCSVCLDLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPTIC 89

Query: 264  QMLHFLLLKIYPTTYNRRETQTLECERANDCFSPELNDLVCPSHNNDKLNRLGDTGQSSL 443
            QMLHFLL K+YP  Y RRE QTLE E     FSP+     C S          D      
Sbjct: 90   QMLHFLLFKLYPMVYTRREEQTLEEEMEMGFFSPQFGYKECNS----------DLKHHHP 139

Query: 444  TNSKAHLSSYPCSFEDGEGCANMEQVK-------LSPPFQGIGGNHPNENSPGGFEVNSS 602
             + K  L S  C F +GE C + +Q++       +  P   I     +EN          
Sbjct: 140  RDRKHALDS--CFFRNGEFCGSTQQIESVKSVSMIQAPTMSIPNKVCDENC-----CMIK 192

Query: 603  NLAVKENKLCEGNSIETHVQVSIVDMLCVACKELLFRPLVLNCGHVYCETCICIPANETL 782
              +V+EN L E  S     QVSI D+ C  CK+LLF P+VLNCGHVYCETCI  P NE L
Sbjct: 193  PDSVEENNLPEDKSNRNCKQVSIADVQCSTCKQLLFHPVVLNCGHVYCETCIG-PVNEML 251

Query: 783  RCQVCQSLHPSGFPKVCLELHHFLEGQFPTEYAERRVKTQIKEVDFQQETSTTRSAEAGK 962
             CQVCQSLHP GFPKVCLE  HFLE  FPTEYA R    Q K+V  + +   T S +A +
Sbjct: 252  TCQVCQSLHPRGFPKVCLEFDHFLEEYFPTEYAMRIEAVQAKQVPVKFQHPITCSTKASE 311

Query: 963  EGVHFSFPS-EENFWPSW-GDHNLNVHFGVGCDFCGMYPITGSRYKCKDCVEAIGFDLCG 1136
            +    S  +  EN   SW  D +  VH GVGCD CG+YPI G RYKCKDCVE IGFDLCG
Sbjct: 312  KSFQSSSATTRENL--SWRADPHSKVHVGVGCDSCGVYPIVGDRYKCKDCVEEIGFDLCG 369

Query: 1137 ECYNTRSKLPGRFNQQHTPEHRFEIVRSNSVRSMILRLIRGQVEDGS 1277
            +CYNT SK PGRFNQQHT EH+FE+V+SN + +++LRL+ GQ++  S
Sbjct: 370  DCYNTCSKRPGRFNQQHTSEHKFELVKSNIIHNIMLRLVTGQLDSAS 416


>emb|CBI37313.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  393 bits (1010), Expect = e-107
 Identities = 202/386 (52%), Positives = 247/386 (63%), Gaps = 1/386 (0%)
 Frame = +3

Query: 120  CLDLLYKPIVLACGHVSCFWCVHKSMNGLRESHCPTCRNPYHYFPNICQMLHFLLLKIYP 299
            C DLLYKPIVLACGH+SCFWCVH SM+G  ESHCP CRNPY +FP ICQMLHF+LLK+YP
Sbjct: 8    CRDLLYKPIVLACGHISCFWCVHYSMDGAHESHCPICRNPYSHFPTICQMLHFMLLKMYP 67

Query: 300  TTYNRRETQTLECERANDCFSPELNDLVCPSHNNDKLNRLGDTGQSSLTNSKAHLSSYPC 479
              Y RRE QTLE E    CFSP  +     SH   KL    D    S+T  +  L     
Sbjct: 68   VAYKRREKQTLEREEETRCFSPRFDAYGGGSHTYKKLKIEADPADPSITVFEFKLCPDSS 127

Query: 480  SFEDGEGCAN-MEQVKLSPPFQGIGGNHPNENSPGGFEVNSSNLAVKENKLCEGNSIETH 656
            S    +  A+ M++  +S P   +    P      G     + LA +EN + + N  +T 
Sbjct: 128  SNRVKKHFADLMQRQPVSLPQDFV---IPISKQTSGGNPQGATLADEENVVLKNNLDQTC 184

Query: 657  VQVSIVDMLCVACKELLFRPLVLNCGHVYCETCICIPANETLRCQVCQSLHPSGFPKVCL 836
             Q+SI D+ C ACK+LLFRP+VLNCGHVYCETC  IP +E  RC+VCQ LHPSGFPKVCL
Sbjct: 185  EQLSIADVQCTACKQLLFRPVVLNCGHVYCETCFNIPVDERFRCKVCQVLHPSGFPKVCL 244

Query: 837  ELHHFLEGQFPTEYAERRVKTQIKEVDFQQETSTTRSAEAGKEGVHFSFPSEENFWPSWG 1016
            EL +FLE QFP EYA RR   Q+K V      ST  S  +G +G  +S   +E +     
Sbjct: 245  ELDNFLEEQFPEEYALRREAVQLKAVHLHDAPSTW-SKNSGIQGFKWSSVPKEEYSTWLR 303

Query: 1017 DHNLNVHFGVGCDFCGMYPITGSRYKCKDCVEAIGFDLCGECYNTRSKLPGRFNQQHTPE 1196
            D+   +H   GCD CGMYPI G RY+CKDC E IGFDLCG+CYNT SKLPGRFNQQHTPE
Sbjct: 304  DNGPKIHPCAGCDSCGMYPIVGDRYRCKDCKEKIGFDLCGDCYNTNSKLPGRFNQQHTPE 363

Query: 1197 HRFEIVRSNSVRSMILRLIRGQVEDG 1274
            H+FE+V +  ++  ++RL+  Q+ DG
Sbjct: 364  HKFELV-NWKLKQEMMRLMVEQLGDG 388


>ref|XP_003551419.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Glycine max]
          Length = 421

 Score =  388 bits (997), Expect = e-105
 Identities = 194/415 (46%), Positives = 258/415 (62%), Gaps = 3/415 (0%)
 Frame = +3

Query: 42   ETNPIFMAAMETQPDEQISGSFVCCVCLDLLYKPIVLACGHVSCFWCVHKSMNGLRESHC 221
            E N      +E    E+I  SFVCCVCLDLLYKPIVL+CGH+ CFWCV+ SMN LRES C
Sbjct: 2    ENNAFRDRILEDNEHEEIPDSFVCCVCLDLLYKPIVLSCGHICCFWCVYNSMNCLRESQC 61

Query: 222  PTCRNPYHYFPNICQMLHFLLLKIYPTTYNRRETQTLECERANDCFSPELNDLVCPSHNN 401
            P CRN Y++FP +CQ+LHFLLLKIY   Y RRE QTLE E+ +  +SP+ +   C S   
Sbjct: 62   PVCRNQYYHFPTVCQLLHFLLLKIYTAAYKRRENQTLEEEKQSGFYSPQFDPDTCESQ-- 119

Query: 402  DKLNRLGDTGQSSLTNSKAHLSSYPCSFEDGEGCANMEQVKLSPPFQGIGGNHPNENSPG 581
                + G +G  S ++S  +L+S  C+    E C  +EQ           G+  NE   G
Sbjct: 120  ---AKFGHSGIPS-SSSNLNLTSNSCNVGTSE-C--LEQ----------SGSAANEGDDG 162

Query: 582  GFEVNSSNLAV---KENKLCEGNSIETHVQVSIVDMLCVACKELLFRPLVLNCGHVYCET 752
                +  +  +    + K      +    ++S+ D+ C  CK+LLF P+VLNCGHVYC+T
Sbjct: 163  TIYYDGESDIIGTPAKGKKMPQEELSVQRKLSVADVTCTMCKQLLFHPVVLNCGHVYCQT 222

Query: 753  CICIPANETLRCQVCQSLHPSGFPKVCLELHHFLEGQFPTEYAERRVKTQIKEVDFQQET 932
            C+    +E LRC+VCQS HP G PKVCLEL HFLE QFP EY +RR   ++K++  + +T
Sbjct: 223  CVINIDDEMLRCKVCQSPHPRGLPKVCLELDHFLEEQFPEEYGQRRDAIELKQIKVKPDT 282

Query: 933  STTRSAEAGKEGVHFSFPSEENFWPSWGDHNLNVHFGVGCDFCGMYPITGSRYKCKDCVE 1112
             ++ S + GK   +  +         W D +  VH GVGCDFCGM+PI G RY+C DC E
Sbjct: 283  PSSCSLDNGKRVENIDW---------WSDPDPKVHIGVGCDFCGMFPIIGDRYRCIDCKE 333

Query: 1113 AIGFDLCGECYNTRSKLPGRFNQQHTPEHRFEIVRSNSVRSMILRLIRGQVEDGS 1277
             +GFDLCG+CY +RSKLPGRFNQQHT EH+F++V  N + +M+LRL   Q+ +GS
Sbjct: 334  KMGFDLCGDCYASRSKLPGRFNQQHTSEHKFKLVPPNIIHNMMLRLATAQLGEGS 388


>ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|222843507|gb|EEE81054.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  387 bits (995), Expect = e-105
 Identities = 207/388 (53%), Positives = 244/388 (62%), Gaps = 9/388 (2%)
 Frame = +3

Query: 84   DEQISGSFVCCVCLDLLYKPIVLACGHVSCFWCVHKSMNGLRESHCPTCRNPYHYFPNIC 263
            +E+ S SF C VCLDLLYKPIVL+CGH+SCFWCVHKSM+GLRES+CP CR+PY++FP IC
Sbjct: 17   EEEFSDSFRCSVCLDLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPTIC 76

Query: 264  QMLHFLLLKIYPTTYNRRETQTLECERANDCFSPELNDLVCPSHNNDKLNRLGDTGQSSL 443
            QMLHFLL K+YP  Y RRE QTLE E     FSP+     C S          D      
Sbjct: 77   QMLHFLLFKLYPMVYTRREEQTLEEEMEMGFFSPQFGYKECNS----------DLKHHHP 126

Query: 444  TNSKAHLSSYPCSFEDGEGCANMEQVK-------LSPPFQGIGGNHPNENSPGGFEVNSS 602
             + K  L S  C F +GE C + +Q++       +  P   I     +EN          
Sbjct: 127  RDRKHALDS--CFFRNGEFCGSTQQIESVKSVSMIQAPTMSIPNKVCDENC-----CMIK 179

Query: 603  NLAVKENKLCEGNSIETHVQVSIVDMLCVACKELLFRPLVLNCGHVYCETCICIPANETL 782
              +V+EN L E  S     QVSI D+ C  CK+LLF P+VLNCGHVYCETCI  P NE L
Sbjct: 180  PDSVEENNLPEDKSNRNCKQVSIADVQCSTCKQLLFHPVVLNCGHVYCETCIG-PVNEML 238

Query: 783  RCQVCQSLHPSGFPKVCLELHHFLEGQFPTEYAERRVKTQIKEVDFQQE-TSTTRSAEAG 959
             CQVCQSLHP GFPKVCLE  HFLE  FPTEYA R    Q K++        +T+++E  
Sbjct: 239  TCQVCQSLHPRGFPKVCLEFDHFLEEYFPTEYAMRIEAVQAKQLPLNHPLPGSTKASE-- 296

Query: 960  KEGVHFSFPSEENFWPSW-GDHNLNVHFGVGCDFCGMYPITGSRYKCKDCVEAIGFDLCG 1136
            K     S  + EN   SW  D +  VH GVGCD CG+YPI G RYKCKDCVE IGFDLCG
Sbjct: 297  KSFQSSSATTRENL--SWRADPHSKVHVGVGCDSCGVYPIVGDRYKCKDCVEEIGFDLCG 354

Query: 1137 ECYNTRSKLPGRFNQQHTPEHRFEIVRS 1220
            +CYNT SK PGRFNQQHT EH+FE+V+S
Sbjct: 355  DCYNTCSKRPGRFNQQHTSEHKFELVKS 382


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