BLASTX nr result

ID: Panax21_contig00015574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015574
         (965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like ...   141   2e-31
dbj|BAF46312.1| hypothetical protein [Ipomoea nil]                    129   8e-28
gb|ABX26124.1| bypass1 [Nicotiana benthamiana]                        124   3e-26
gb|ABB16971.1| unknown [Solanum tuberosum]                            121   2e-25
ref|XP_002882050.1| hypothetical protein ARALYDRAFT_904061 [Arab...   119   8e-25

>ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like [Vitis vinifera]
          Length = 350

 Score =  141 bits (356), Expect = 2e-31
 Identities = 74/117 (63%), Positives = 88/117 (75%)
 Frame = -3

Query: 963 FTGMQVFVNREIRNTISSGCVTVLKELEAVDVSVEKLYPLVEDGPSPVKVEEFQNCKLDL 784
           FT +Q +VN EIRNT SSG VTVLKELEAVD S+ KLYP+V+DG  P +   FQN   DL
Sbjct: 236 FTDLQSYVNVEIRNTFSSGRVTVLKELEAVDTSINKLYPMVQDGVGPAEDGTFQNSVSDL 295

Query: 783 KKSTNKLSEGLDVLMKEVDGFFQIVLTGRDALLCNLRVDTNVSEPMQENNSTEQVVR 613
            KS  KLSEGLD+L K+VDGFFQ+VLTGRDALLCNLRV      PM E+N+  +++R
Sbjct: 296 GKSVEKLSEGLDLLTKDVDGFFQMVLTGRDALLCNLRV-----SPMHEDNTQARILR 347


>dbj|BAF46312.1| hypothetical protein [Ipomoea nil]
          Length = 351

 Score =  129 bits (325), Expect = 8e-28
 Identities = 62/117 (52%), Positives = 85/117 (72%)
 Frame = -3

Query: 963 FTGMQVFVNREIRNTISSGCVTVLKELEAVDVSVEKLYPLVEDGPSPVKVEEFQNCKLDL 784
           +  +Q F+NRE+RN  SSG  T LK+LEA+  SVEKL+P+++DG +P+  +   +    L
Sbjct: 235 YVDLQGFINREMRNIYSSGAATALKDLEAIHASVEKLHPIIQDGVNPIGADVLPHETSGL 294

Query: 783 KKSTNKLSEGLDVLMKEVDGFFQIVLTGRDALLCNLRVDTNVSEPMQENNSTEQVVR 613
            K  ++LS+GLD L KEVDGFFQIVLTGRDALLCNLR+ +N + P QENN+ +  +R
Sbjct: 295 AKMADRLSKGLDGLAKEVDGFFQIVLTGRDALLCNLRIGSNNASPSQENNAEQPTLR 351


>gb|ABX26124.1| bypass1 [Nicotiana benthamiana]
          Length = 352

 Score =  124 bits (311), Expect = 3e-26
 Identities = 61/114 (53%), Positives = 83/114 (72%)
 Frame = -3

Query: 963 FTGMQVFVNREIRNTISSGCVTVLKELEAVDVSVEKLYPLVEDGPSPVKVEEFQNCKLDL 784
           F  ++ F++ EIR+  S G  T LKELEAVD SV+KL+P+++DG  P+  E+ +    DL
Sbjct: 235 FVDLRDFISGEIRSIYSGGKFTALKELEAVDASVKKLFPVIQDGIDPIDAEQLELLTSDL 294

Query: 783 KKSTNKLSEGLDVLMKEVDGFFQIVLTGRDALLCNLRVDTNVSEPMQENNSTEQ 622
            K + KLSEGLD+L KE+D FFQI+LTGRDALLCNLRV + V +P+Q NN+  +
Sbjct: 295 TKKSEKLSEGLDLLTKEMDKFFQILLTGRDALLCNLRVGSAVIKPVQPNNNVHK 348


>gb|ABB16971.1| unknown [Solanum tuberosum]
          Length = 352

 Score =  121 bits (304), Expect = 2e-25
 Identities = 59/114 (51%), Positives = 80/114 (70%)
 Frame = -3

Query: 963 FTGMQVFVNREIRNTISSGCVTVLKELEAVDVSVEKLYPLVEDGPSPVKVEEFQNCKLDL 784
           F  ++ F+++EIR   SSG +T LKELE VD SV+KLYPL++DG  P + E+      +L
Sbjct: 235 FVDVRDFISQEIRRIYSSGRITALKELEVVDTSVKKLYPLIQDGVDPNEAEQLHLLTSNL 294

Query: 783 KKSTNKLSEGLDVLMKEVDGFFQIVLTGRDALLCNLRVDTNVSEPMQENNSTEQ 622
            +   KLS GLD+L KE D FF I+LTGRD+LLCNLR+D+ VS P + NN+ E+
Sbjct: 295 TEKAEKLSGGLDLLAKEADRFFHILLTGRDSLLCNLRIDSTVSNPAEVNNNVER 348


>ref|XP_002882050.1| hypothetical protein ARALYDRAFT_904061 [Arabidopsis lyrata subsp.
           lyrata] gi|297327889|gb|EFH58309.1| hypothetical protein
           ARALYDRAFT_904061 [Arabidopsis lyrata subsp. lyrata]
          Length = 347

 Score =  119 bits (299), Expect = 8e-25
 Identities = 58/103 (56%), Positives = 78/103 (75%)
 Frame = -3

Query: 963 FTGMQVFVNREIRNTISSGCVTVLKELEAVDVSVEKLYPLVEDGPSPVKVEEFQNCKLDL 784
           FT MQ  VN EIR+ +SSG  T+LKELE+VD SVEKLYP+++DG  PV+VE F++  ++L
Sbjct: 236 FTDMQSVVNAEIRHMLSSGRTTILKELESVDASVEKLYPMIQDGVDPVEVECFKDYVMEL 295

Query: 783 KKSTNKLSEGLDVLMKEVDGFFQIVLTGRDALLCNLRVDTNVS 655
                KLS+GLD L++EVD FF++ L+GRD LLCNLR   ++S
Sbjct: 296 GTQAEKLSQGLDQLLEEVDSFFKLTLSGRDVLLCNLRSSDSIS 338


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