BLASTX nr result

ID: Panax21_contig00015558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015558
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   294   2e-77
emb|CBI27197.3| unnamed protein product [Vitis vinifera]              294   2e-77
gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis mel...   276   3e-72
ref|XP_002303505.1| chromatin remodeling complex subunit [Populu...   272   7e-71
ref|XP_004158671.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   268   1e-69

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  294 bits (752), Expect = 2e-77
 Identities = 164/299 (54%), Positives = 198/299 (66%), Gaps = 7/299 (2%)
 Frame = -3

Query: 880  EKKEDKVVAVTEENEWDRLLRVRWEKYQNEEEAALGRGKRLRKAVSYREAYAPQPTESLS 701
            E+KED +V  TEENEWD+LLR+RWEKYQ+EEEAALGRGKR RKAVSYREAYAP P+E+LS
Sbjct: 1361 ERKEDNLVG-TEENEWDKLLRIRWEKYQSEEEAALGRGKRQRKAVSYREAYAPHPSETLS 1419

Query: 700  ESGADE------EPEREYSPAGRALKEKFAKLRSRQKERLAQRNVIG-AXXXXXXXXXXX 542
            ESG +E      EPEREY+PAGRALK KFAKLR+RQKERLAQRN I  +           
Sbjct: 1420 ESGGEEDREPEPEPEREYTPAGRALKAKFAKLRARQKERLAQRNAIERSCNVEEPSVTEP 1479

Query: 541  XXXXPTSSVRDSNPTIRSDQPSGEESSAIDLEDNRHCQNLEAPKTKSDLDPRLSKLSKHK 362
                P  + +D     R  QP  E++ AIDLED +  Q L+A K K+D + RL + S+HK
Sbjct: 1480 LLPFPPINAKDREQVTRLAQPVREKAPAIDLEDGKIGQPLDAMKGKADSNVRLGRQSRHK 1539

Query: 361  MRSHLDFPVKPFGRHSLEIVLPGHHLQGTGFTNSMSTNLLPVLGLCAPNANQIELSEKNI 182
              SHLD   +  G  S +I LP HH QGT +TN ++ NLLPVLGLCAPNA Q+E S KN 
Sbjct: 1540 --SHLDLSARALGHPSPDIFLPSHHYQGTSYTNLVANNLLPVLGLCAPNATQLESSHKNF 1597

Query: 181  PKSHSRHNRKGSRPGFPFEIAPLRGTPNETDVKPHEPFSDKFKLPSASLEALHRGPKNS 5
             +S+ R  R G  P FPF +AP  GT  E D+K HE  SDK +L  AS +      KN+
Sbjct: 1598 SRSNGRQTRHGVGPEFPFCLAPCSGTSMEMDIKGHENASDKLRLLDASTDLPQLQRKNN 1656


>emb|CBI27197.3| unnamed protein product [Vitis vinifera]
          Length = 1638

 Score =  294 bits (752), Expect = 2e-77
 Identities = 164/298 (55%), Positives = 195/298 (65%), Gaps = 6/298 (2%)
 Frame = -3

Query: 880  EKKEDKVVAVTEENEWDRLLRVRWEKYQNEEEAALGRGKRLRKAVSYREAYAPQPTESLS 701
            E+KED +V  TEENEWD+LLR+RWEKYQ+EEEAALGRGKR RKAVSYREAYAP P+E+LS
Sbjct: 770  ERKEDNLVG-TEENEWDKLLRIRWEKYQSEEEAALGRGKRQRKAVSYREAYAPHPSETLS 828

Query: 700  ESGADE------EPEREYSPAGRALKEKFAKLRSRQKERLAQRNVIGAXXXXXXXXXXXX 539
            ESG +E      EPEREY+PAGRALK KFAKLR+RQKERLAQRN I              
Sbjct: 829  ESGGEEDREPEPEPEREYTPAGRALKAKFAKLRARQKERLAQRNAIE------------- 875

Query: 538  XXXPTSSVRDSNPTIRSDQPSGEESSAIDLEDNRHCQNLEAPKTKSDLDPRLSKLSKHKM 359
                    R  N   R  QP  E++ AIDLED +  Q L+A K K+D + RL + S+HK 
Sbjct: 876  --------RSCNQVTRLAQPVREKAPAIDLEDGKIGQPLDAMKGKADSNVRLGRQSRHK- 926

Query: 358  RSHLDFPVKPFGRHSLEIVLPGHHLQGTGFTNSMSTNLLPVLGLCAPNANQIELSEKNIP 179
             SHLD   +  G  S +I LP HH QGT +TN ++ NLLPVLGLCAPNA Q+E S KN  
Sbjct: 927  -SHLDLSARALGHPSPDIFLPSHHYQGTSYTNLVANNLLPVLGLCAPNATQLESSHKNFS 985

Query: 178  KSHSRHNRKGSRPGFPFEIAPLRGTPNETDVKPHEPFSDKFKLPSASLEALHRGPKNS 5
            +S+ R  R G  P FPF +AP  GT  E D+K HE  SDK +L  AS +      KN+
Sbjct: 986  RSNGRQTRHGVGPEFPFCLAPCSGTSMEMDIKGHENASDKLRLLDASTDLPQLQRKNN 1043


>gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo]
          Length = 2374

 Score =  276 bits (707), Expect = 3e-72
 Identities = 149/295 (50%), Positives = 195/295 (66%), Gaps = 9/295 (3%)
 Frame = -3

Query: 880  EKKEDKVVAVTEENEWDRLLRVRWEKYQNEEEAALGRGKRLRKAVSYREAYAPQPTESLS 701
            E+K+D  +   EENEWDRLLR+RWEKYQNEEEAALGRGKRLRKAVSYREAYAP P+E+LS
Sbjct: 1409 ERKDDNGLTGAEENEWDRLLRIRWEKYQNEEEAALGRGKRLRKAVSYREAYAPHPSETLS 1468

Query: 700  ESGADEE------PEREYSPAGRALKEKFAKLRSRQKERLAQRNVIG---AXXXXXXXXX 548
            ESG +EE      PEREY+PAGRALKEKFAKLR+RQKERLA+RN +    +         
Sbjct: 1469 ESGGEEEKEPEPEPEREYTPAGRALKEKFAKLRARQKERLAKRNALEESFSREGVTLHGS 1528

Query: 547  XXXXXXPTSSVRDSNPTIRSDQPSGEESSAIDLEDNRHCQNLEAPKTKSDLDPRLSKLSK 368
                  P ++  D +    S + + E +S   LED++   + +APK++ D   RL ++S+
Sbjct: 1529 FPHPPCPHTNAADPDQAAASLETNKERTSVFVLEDDKLVHSADAPKSRIDSTLRLGRISR 1588

Query: 367  HKMRSHLDFPVKPFGRHSLEIVLPGHHLQGTGFTNSMSTNLLPVLGLCAPNANQIELSEK 188
            HK+ ++LD  V P G    +  LP  H  GT   NS+  NLLPVLGLCAPNA+Q+E S +
Sbjct: 1589 HKVSNNLDLAVGPIGYSPADNCLPSQHFAGTSHANSVPINLLPVLGLCAPNAHQLETSRR 1648

Query: 187  NIPKSHSRHNRKGSRPGFPFEIAPLRGTPNETDVKPHEPFSDKFKLPSASLEALH 23
            N  +S  + +R  + P FPF+++P  GT + TD+   EP  DK +LPS+S E LH
Sbjct: 1649 NSSRSSGKQSRTVAGPDFPFKLSPCSGTISGTDIGGGEPVPDK-ELPSSSAERLH 1702


>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840937|gb|EEE78484.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2327

 Score =  272 bits (696), Expect = 7e-71
 Identities = 158/302 (52%), Positives = 190/302 (62%), Gaps = 9/302 (2%)
 Frame = -3

Query: 880  EKKEDKVVAVTEENEWDRLLRVRWEKYQNEEEAALGRGKRLRKAVSYREAYAPQPTESLS 701
            E+KE+ V+ VTEE+EWDRLLRVRWEKYQ EEEAALGRGKRLRKAVSYREAYAP P E+LS
Sbjct: 1353 ERKEENVINVTEESEWDRLLRVRWEKYQTEEEAALGRGKRLRKAVSYREAYAPHPNETLS 1412

Query: 700  ESGADE------EPEREYSPAGRALKEKFAKLRSRQKERLAQRNVIGA-XXXXXXXXXXX 542
            ESG +E      EPEREY+PAGR LK K+AKLR+RQKERLAQRN I              
Sbjct: 1413 ESGGEEDREPEVEPEREYTPAGRVLKAKYAKLRARQKERLAQRNSIEVFHPNEGPPIPEL 1472

Query: 541  XXXXPTSSVRDSNPTIRSDQPSGEESS-AIDLEDNRHCQNLEAPKTKSDLDPRLSKLSKH 365
                  ++  D N  +   Q   E+ S  IDLED    Q  +A ++ +D   +   LS H
Sbjct: 1473 VPHCLPANNTDGNQAVEFAQQGREKKSFVIDLEDYEFTQP-DATRSNADATIKSGHLSNH 1531

Query: 364  KMRSHLDFPVKPFGRHSLEIVLPGHHLQGTGFTN-SMSTNLLPVLGLCAPNANQIELSEK 188
            K+R HLD  +   G H  +  LP H  QGTG  N  +S NLLPVLGLCAPNANQ++L  K
Sbjct: 1532 KLRGHLDLSINSLG-HPSDTKLPAHQNQGTGNANLLLSNNLLPVLGLCAPNANQLDLLHK 1590

Query: 187  NIPKSHSRHNRKGSRPGFPFEIAPLRGTPNETDVKPHEPFSDKFKLPSASLEALHRGPKN 8
            N  +S  R ++  + P FPF + P  GT  ETDVK  E  SDK KL  AS E L +  KN
Sbjct: 1591 NSSRSKGRQSKPVTGPEFPFSLPPCSGTSIETDVKHQETTSDKPKLLDASAEVLQQRLKN 1650

Query: 7    SV 2
            ++
Sbjct: 1651 NL 1652


>ref|XP_004158671.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228553,
            partial [Cucumis sativus]
          Length = 1851

 Score =  268 bits (685), Expect = 1e-69
 Identities = 144/295 (48%), Positives = 195/295 (66%), Gaps = 9/295 (3%)
 Frame = -3

Query: 880  EKKEDKVVAVTEENEWDRLLRVRWEKYQNEEEAALGRGKRLRKAVSYREAYAPQPTESLS 701
            E+K+D  +   EENEWDRLLR+RWEKYQ+EEEAALGRGKRLRKAVSYREAYAP P+E+LS
Sbjct: 1405 ERKDDNGLTGAEENEWDRLLRIRWEKYQSEEEAALGRGKRLRKAVSYREAYAPHPSETLS 1464

Query: 700  ESGADEE------PEREYSPAGRALKEKFAKLRSRQKERLAQRNVIG---AXXXXXXXXX 548
            ESG +EE      PEREY+PAGRALKEK++KLR+RQKERLA+RN +    +         
Sbjct: 1465 ESGGEEEKEPEPEPEREYTPAGRALKEKYSKLRARQKERLAKRNALEESFSREGVTLHGS 1524

Query: 547  XXXXXXPTSSVRDSNPTIRSDQPSGEESSAIDLEDNRHCQNLEAPKTKSDLDPRLSKLSK 368
                  P ++    +    S + + E +S   LED++   + +APK++ D   RL ++S+
Sbjct: 1525 FPHPPCPHTNAAGPDQAAGSLETNKERTSVFVLEDDKLVHSADAPKSRIDSTLRLGRMSR 1584

Query: 367  HKMRSHLDFPVKPFGRHSLEIVLPGHHLQGTGFTNSMSTNLLPVLGLCAPNANQIELSEK 188
            HK+ ++LD  V P G    +  LP  H  GT   NS+  NLLPVLGLCAPNA+Q+E S +
Sbjct: 1585 HKVSNNLDLAVGPIGYLPADNCLPSQHFAGTSHANSVPINLLPVLGLCAPNAHQLETSRR 1644

Query: 187  NIPKSHSRHNRKGSRPGFPFEIAPLRGTPNETDVKPHEPFSDKFKLPSASLEALH 23
            N  +S+ + +R  + P FPF+++P  GT + TD+   EP  DK +LP++S E LH
Sbjct: 1645 NSSRSNGKQSRTVAGPDFPFKLSPCSGTISGTDIGGGEPVPDK-ELPASSAERLH 1698


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