BLASTX nr result
ID: Panax21_contig00015542
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00015542 (813 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264... 179 6e-43 ref|XP_002511168.1| conserved hypothetical protein [Ricinus comm... 172 6e-41 ref|XP_002318134.1| predicted protein [Populus trichocarpa] gi|1... 169 9e-40 ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II tra... 167 3e-39 ref|XP_002321708.1| predicted protein [Populus trichocarpa] gi|2... 165 1e-38 >ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264705 [Vitis vinifera] gi|147789866|emb|CAN73869.1| hypothetical protein VITISV_001275 [Vitis vinifera] gi|297734439|emb|CBI15686.3| unnamed protein product [Vitis vinifera] Length = 174 Score = 179 bits (454), Expect = 6e-43 Identities = 104/180 (57%), Positives = 120/180 (66%) Frame = +2 Query: 50 KTTQELAMEGQKHLEETIEAEFQILSSMNDELCXXXXXXXXXXXXXXXXXXXXXGHNHHS 229 K TQELA+EGQKHLEETIE+ FQILSSMNDELC + HS Sbjct: 7 KATQELALEGQKHLEETIESAFQILSSMNDELCNPTLWSTPPPPATAA--------SSHS 58 Query: 230 SINGTNGDVSSDSXXXXXXXFELGGGALDEARLRYKSSVASLRSLLTTIPTSRKAKPYEX 409 S + NGD SSD GGGALD+ARLRYKSSVASLR++L I +S+KAK +E Sbjct: 59 SAS-LNGDASSDFSHHMEIA---GGGALDDARLRYKSSVASLRAVLNAIQSSQKAKAFEA 114 Query: 410 XXXXXXXXXPMDQDDIEKLEERASTLRKELVNKNKHLKILIDQLRELITDVSTWQSPCSV 589 DQ +IEKLEERAS LRKEL +KNK+LK+LIDQLR+LITD+STWQSPCSV Sbjct: 115 SSAASGSASQADQAEIEKLEERASNLRKELADKNKYLKLLIDQLRDLITDISTWQSPCSV 174 >ref|XP_002511168.1| conserved hypothetical protein [Ricinus communis] gi|223550283|gb|EEF51770.1| conserved hypothetical protein [Ricinus communis] Length = 196 Score = 172 bits (437), Expect = 6e-41 Identities = 102/195 (52%), Positives = 120/195 (61%), Gaps = 9/195 (4%) Frame = +2 Query: 32 STNLEQKTTQELAMEGQKHLEETIEAEFQILSSMNDELCXXXXXXXXXXXXXXXXXXXXX 211 ST + KTTQELAMEGQKHLEETI+A +QILSSMNDELC Sbjct: 7 STITQSKTTQELAMEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSSSNNTTSPISAP 66 Query: 212 GHNHHSSINGT-NGDVSSDSXXXXXXXFE--------LGGGALDEARLRYKSSVASLRSL 364 +++ S NG NGD SD+ G GALDEAR RYK+SVA+LR + Sbjct: 67 ANSNSLSQNGVVNGDSVSDAVVAHHFDGTGTGVVGGGTGNGALDEARFRYKNSVAALREV 126 Query: 365 LTTIPTSRKAKPYEXXXXXXXXXXPMDQDDIEKLEERASTLRKELVNKNKHLKILIDQLR 544 L IP S KA +E P D+ D+EKLEE+AS LRKEL NKN +LK+LIDQLR Sbjct: 127 LAAIPNSHKAISFETSSSS-----PADEADVEKLEEQASNLRKELFNKNAYLKLLIDQLR 181 Query: 545 ELITDVSTWQSPCSV 589 +LITD+STWQSPCSV Sbjct: 182 DLITDISTWQSPCSV 196 >ref|XP_002318134.1| predicted protein [Populus trichocarpa] gi|118486707|gb|ABK95190.1| unknown [Populus trichocarpa] gi|222858807|gb|EEE96354.1| predicted protein [Populus trichocarpa] Length = 185 Score = 169 bits (427), Expect = 9e-40 Identities = 100/188 (53%), Positives = 115/188 (61%), Gaps = 3/188 (1%) Frame = +2 Query: 35 TNLEQKTTQELAMEGQKHLEETIEAEFQILSSMNDELCXXXXXXXXXXXXXXXXXXXXXG 214 T KTTQELA+EGQKHLEETI+A +QILSSMNDELC Sbjct: 12 TPQHSKTTQELAIEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSTSTSTVTSPI--- 68 Query: 215 HNHHSSINGTNGDVS---SDSXXXXXXXFELGGGALDEARLRYKSSVASLRSLLTTIPTS 385 +S N NGD + SDS +G GALDEAR RYK+SVA+LR +L IP S Sbjct: 69 ----TSSNAQNGDANAAVSDSTLELNGGGGVGNGALDEARFRYKNSVAALRDVLAAIPNS 124 Query: 386 RKAKPYEXXXXXXXXXXPMDQDDIEKLEERASTLRKELVNKNKHLKILIDQLRELITDVS 565 KAKP+E P DQ +IEKLEERAS LRKEL KN ++K+LIDQLRELI D+S Sbjct: 125 HKAKPFETSS-------PADQAEIEKLEERASNLRKELAKKNTYVKLLIDQLRELIADIS 177 Query: 566 TWQSPCSV 589 TWQ P SV Sbjct: 178 TWQGPYSV 185 >ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30-like [Cucumis sativus] gi|449532651|ref|XP_004173294.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30-like [Cucumis sativus] Length = 198 Score = 167 bits (423), Expect = 3e-39 Identities = 102/200 (51%), Positives = 122/200 (61%), Gaps = 9/200 (4%) Frame = +2 Query: 17 MEEKGSTNLE-QKTTQELAMEGQKHLEETIEAEFQILSSMNDELCXXXXXXXXXXXXXXX 193 MEEK + L +TTQELAMEG KHLEETIE+ FQIL SMNDELC Sbjct: 1 MEEKSTNVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTA 60 Query: 194 XXXXXX----GHNHHSSINGTNGDVSSDSXXXXXXXFELGG----GALDEARLRYKSSVA 349 G + HS+ NGD SS+S GG GAL+EAR+RYK+SV Sbjct: 61 TSGLTIASPSGPSSHSANGVVNGDASSESTSHHTDSSGGGGSGSGGALEEARVRYKNSVL 120 Query: 350 SLRSLLTTIPTSRKAKPYEXXXXXXXXXXPMDQDDIEKLEERASTLRKELVNKNKHLKIL 529 +LR++L IP S+KAK YE P DQ +I+KLE+ S LRKELV KN H+K+L Sbjct: 121 ALRAILAAIPNSQKAKAYESGTSGHAS--PADQSEIDKLEQHLSNLRKELVVKNLHIKLL 178 Query: 530 IDQLRELITDVSTWQSPCSV 589 IDQLR+L+ DVSTWQSPCSV Sbjct: 179 IDQLRDLVADVSTWQSPCSV 198 >ref|XP_002321708.1| predicted protein [Populus trichocarpa] gi|222868704|gb|EEF05835.1| predicted protein [Populus trichocarpa] Length = 177 Score = 165 bits (418), Expect = 1e-38 Identities = 95/184 (51%), Positives = 118/184 (64%), Gaps = 5/184 (2%) Frame = +2 Query: 53 TTQELAMEGQKHLEETIEAEFQILSSMNDELCXXXXXXXXXXXXXXXXXXXXXGHNHHSS 232 TTQELA+EGQKHLEETI+A +QILSSMNDELC + + + Sbjct: 1 TTQELAIEGQKHLEETIQAGYQILSSMNDELCNPTLWSTTSTATTAVTSPITSKNAQNGA 60 Query: 233 INGT-NGD----VSSDSXXXXXXXFELGGGALDEARLRYKSSVASLRSLLTTIPTSRKAK 397 + T NGD VS + +G GALDEAR RYK+SVA+LR +L IP S KAK Sbjct: 61 VVITVNGDANAAVSDSTHELSGGGGGVGNGALDEARFRYKNSVAALRDVLAAIPNSHKAK 120 Query: 398 PYEXXXXXXXXXXPMDQDDIEKLEERASTLRKELVNKNKHLKILIDQLRELITDVSTWQS 577 P+E P D+ +I+KLEERAS+LRKEL KN ++K+LIDQLRE+ITD+STWQ+ Sbjct: 121 PFETSS-------PADEAEIKKLEERASSLRKELAKKNTYVKLLIDQLREIITDISTWQT 173 Query: 578 PCSV 589 PCSV Sbjct: 174 PCSV 177