BLASTX nr result

ID: Panax21_contig00015537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015537
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]    89   3e-16
ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Viti...    88   7e-16
ref|XP_002511792.1| ring finger protein, putative [Ricinus commu...    87   2e-15
ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like...    85   6e-15
ref|XP_003623843.1| RING finger protein [Medicago truncatula] gi...    84   1e-14

>emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]
          Length = 224

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/59 (79%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
 Frame = -3

Query: 527 WEL*--MLGSGMNLITTVIGFAMSATFIVFICARLICGRMRRLESRPMFEIDSRLDLEQ 357
           WEL   MLG GMNLITTVIGF MSATFIVF+C RLICGR+R +ESR MFEIDSR+DLEQ
Sbjct: 18  WELGLEMLG-GMNLITTVIGFGMSATFIVFVCTRLICGRLRGVESRQMFEIDSRIDLEQ 75


>ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Vitis vinifera]
           gi|296089077|emb|CBI38780.3| unnamed protein product
           [Vitis vinifera]
          Length = 201

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 44/53 (83%), Positives = 48/53 (90%)
 Frame = -3

Query: 515 MLGSGMNLITTVIGFAMSATFIVFICARLICGRMRRLESRPMFEIDSRLDLEQ 357
           MLG GMNLITTVIGF MSATFIVF+C RLICGR+R +ESR MFEIDSR+DLEQ
Sbjct: 1   MLG-GMNLITTVIGFGMSATFIVFVCTRLICGRLRGVESRQMFEIDSRIDLEQ 52


>ref|XP_002511792.1| ring finger protein, putative [Ricinus communis]
           gi|223548972|gb|EEF50461.1| ring finger protein,
           putative [Ricinus communis]
          Length = 201

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 40/53 (75%), Positives = 47/53 (88%)
 Frame = -3

Query: 515 MLGSGMNLITTVIGFAMSATFIVFICARLICGRMRRLESRPMFEIDSRLDLEQ 357
           MLGSGMNLITTVIGF MSATFIVF+C R+ICGR+R  ESR  FE++SR+DL+Q
Sbjct: 1   MLGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRASESRQTFELESRIDLDQ 53


>ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
           gi|449472490|ref|XP_004153610.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
           gi|449516541|ref|XP_004165305.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
          Length = 203

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 41/60 (68%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
 Frame = -3

Query: 515 MLGSGMNLITTVIGFAMSATFIVFICARLICGRMRRLESR-PMFEIDSRLDLEQTPRDQS 339
           M GSGMNLITTVIGF MSATFIVF+C R+ICGR+R  +S  P +EI+SRLDLEQ P  ++
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60


>ref|XP_003623843.1| RING finger protein [Medicago truncatula]
           gi|124360239|gb|ABN08252.1| Zinc finger, RING-type
           [Medicago truncatula] gi|124360861|gb|ABN08833.1| Zinc
           finger, RING-type [Medicago truncatula]
           gi|355498858|gb|AES80061.1| RING finger protein
           [Medicago truncatula] gi|388496154|gb|AFK36143.1|
           unknown [Medicago truncatula]
          Length = 190

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
 Frame = -3

Query: 515 MLGSGMNLITTVIGFAMSATFIVFICARLICGRMR-RLESRPMFEIDSRLDLEQTPRDQS 339
           MLGSG NL+TTVIGF MSATFIVF+C R+ICGR+R  +ESR M+EI+SR D+EQ     +
Sbjct: 1   MLGSGTNLVTTVIGFGMSATFIVFVCTRIICGRLRGGVESRMMYEIESRYDIEQPEHHGN 60

Query: 338 LPGPFHSLEWVQLELLPS 285
            PG     E V +E +P+
Sbjct: 61  DPG----TEPVLIEAIPT 74


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