BLASTX nr result
ID: Panax21_contig00015537
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00015537 (535 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera] 89 3e-16 ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Viti... 88 7e-16 ref|XP_002511792.1| ring finger protein, putative [Ricinus commu... 87 2e-15 ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like... 85 6e-15 ref|XP_003623843.1| RING finger protein [Medicago truncatula] gi... 84 1e-14 >emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera] Length = 224 Score = 89.4 bits (220), Expect = 3e-16 Identities = 47/59 (79%), Positives = 51/59 (86%), Gaps = 2/59 (3%) Frame = -3 Query: 527 WEL*--MLGSGMNLITTVIGFAMSATFIVFICARLICGRMRRLESRPMFEIDSRLDLEQ 357 WEL MLG GMNLITTVIGF MSATFIVF+C RLICGR+R +ESR MFEIDSR+DLEQ Sbjct: 18 WELGLEMLG-GMNLITTVIGFGMSATFIVFVCTRLICGRLRGVESRQMFEIDSRIDLEQ 75 >ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Vitis vinifera] gi|296089077|emb|CBI38780.3| unnamed protein product [Vitis vinifera] Length = 201 Score = 88.2 bits (217), Expect = 7e-16 Identities = 44/53 (83%), Positives = 48/53 (90%) Frame = -3 Query: 515 MLGSGMNLITTVIGFAMSATFIVFICARLICGRMRRLESRPMFEIDSRLDLEQ 357 MLG GMNLITTVIGF MSATFIVF+C RLICGR+R +ESR MFEIDSR+DLEQ Sbjct: 1 MLG-GMNLITTVIGFGMSATFIVFVCTRLICGRLRGVESRQMFEIDSRIDLEQ 52 >ref|XP_002511792.1| ring finger protein, putative [Ricinus communis] gi|223548972|gb|EEF50461.1| ring finger protein, putative [Ricinus communis] Length = 201 Score = 87.0 bits (214), Expect = 2e-15 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = -3 Query: 515 MLGSGMNLITTVIGFAMSATFIVFICARLICGRMRRLESRPMFEIDSRLDLEQ 357 MLGSGMNLITTVIGF MSATFIVF+C R+ICGR+R ESR FE++SR+DL+Q Sbjct: 1 MLGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRASESRQTFELESRIDLDQ 53 >ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus] gi|449472490|ref|XP_004153610.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus] gi|449516541|ref|XP_004165305.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus] Length = 203 Score = 85.1 bits (209), Expect = 6e-15 Identities = 41/60 (68%), Positives = 49/60 (81%), Gaps = 1/60 (1%) Frame = -3 Query: 515 MLGSGMNLITTVIGFAMSATFIVFICARLICGRMRRLESR-PMFEIDSRLDLEQTPRDQS 339 M GSGMNLITTVIGF MSATFIVF+C R+ICGR+R +S P +EI+SRLDLEQ P ++ Sbjct: 1 MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60 >ref|XP_003623843.1| RING finger protein [Medicago truncatula] gi|124360239|gb|ABN08252.1| Zinc finger, RING-type [Medicago truncatula] gi|124360861|gb|ABN08833.1| Zinc finger, RING-type [Medicago truncatula] gi|355498858|gb|AES80061.1| RING finger protein [Medicago truncatula] gi|388496154|gb|AFK36143.1| unknown [Medicago truncatula] Length = 190 Score = 84.3 bits (207), Expect = 1e-14 Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 1/78 (1%) Frame = -3 Query: 515 MLGSGMNLITTVIGFAMSATFIVFICARLICGRMR-RLESRPMFEIDSRLDLEQTPRDQS 339 MLGSG NL+TTVIGF MSATFIVF+C R+ICGR+R +ESR M+EI+SR D+EQ + Sbjct: 1 MLGSGTNLVTTVIGFGMSATFIVFVCTRIICGRLRGGVESRMMYEIESRYDIEQPEHHGN 60 Query: 338 LPGPFHSLEWVQLELLPS 285 PG E V +E +P+ Sbjct: 61 DPG----TEPVLIEAIPT 74