BLASTX nr result

ID: Panax21_contig00015532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015532
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519464.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    73   7e-11
emb|CBI39086.3| unnamed protein product [Vitis vinifera]               73   7e-11
ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    73   7e-11
ref|XP_003542329.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    73   9e-11
ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putat...    72   1e-10

>ref|XP_003519464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
           max]
          Length = 1118

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = +3

Query: 3   QAVDEPQASRFTWMIENFSRLNTKKLYSEIFVVGGYKWYLIL 128
           Q V++P  SRFTW IENFSR+NTKKLYSEIFVVGGYKW +++
Sbjct: 48  QPVEDPSTSRFTWKIENFSRMNTKKLYSEIFVVGGYKWRVLI 89


>emb|CBI39086.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
 Frame = +3

Query: 3   QAVDEPQASRFTWMIENFSRLNTKKLYSEIFVVGGYKWYLIL-------THLV*LMCEPL 161
           Q V++PQ SRFTW IENFSRLNTKK YSEIFVVGG+KW +++        HL       +
Sbjct: 46  QPVEDPQTSRFTWTIENFSRLNTKKHYSEIFVVGGFKWRVLIFPKGNNVDHL------SM 99

Query: 162 TLFIMPIA**VFGWSRRAEAS 224
            L +   A   +GWSR A+ S
Sbjct: 100 YLDVADSATLPYGWSRYAQFS 120


>ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
           vinifera]
          Length = 1117

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
 Frame = +3

Query: 3   QAVDEPQASRFTWMIENFSRLNTKKLYSEIFVVGGYKWYLIL-------THLV*LMCEPL 161
           Q V++PQ SRFTW IENFSRLNTKK YSEIFVVGG+KW +++        HL       +
Sbjct: 46  QPVEDPQTSRFTWTIENFSRLNTKKHYSEIFVVGGFKWRVLIFPKGNNVDHL------SM 99

Query: 162 TLFIMPIA**VFGWSRRAEAS 224
            L +   A   +GWSR A+ S
Sbjct: 100 YLDVADSATLPYGWSRYAQFS 120


>ref|XP_003542329.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Glycine
           max]
          Length = 1118

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   QAVDEPQASRFTWMIENFSRLNTKKLYSEIFVVGGYKWYLIL 128
           Q V++P +SRFTW I+NFSRLNTKKLYSEIFVVGGYKW +++
Sbjct: 47  QPVEDPPSSRFTWRIDNFSRLNTKKLYSEIFVVGGYKWRVLI 88


>ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223546430|gb|EEF47930.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 1109

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
 Frame = +3

Query: 3   QAVDEPQASRFTWMIENFSRLNTKKLYSEIFVVGGYKWYLIL-------THLV*LMCEPL 161
           Q+ D+P ++RFTW I+NFSRLNTKKLYS++F+VGGYKW +++        HL       +
Sbjct: 45  QSADDPPSARFTWTIDNFSRLNTKKLYSDVFIVGGYKWRILIFPKGNNVDHL------SM 98

Query: 162 TLFIMPIA**VFGWSRRAEAS 224
            L +   A   +GWSR A+ S
Sbjct: 99  YLDVADSATLPYGWSRYAQFS 119


Top