BLASTX nr result

ID: Panax21_contig00015514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015514
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB08874.1| malate dehydrogenase [Vitis vinifera]                   72   6e-11
ref|XP_002283814.1| PREDICTED: NADP-dependent malic enzyme [Viti...    72   6e-11
emb|CAN69517.1| hypothetical protein VITISV_024155 [Vitis vinifera]    72   6e-11
gb|ABI98682.2| chloroplast NADP-malic enzyme precursor [Nicotian...    70   1e-10
ref|NP_001234458.1| NADP-malic enzyme [Solanum lycopersicum] gi|...    64   1e-08

>gb|AAB08874.1| malate dehydrogenase [Vitis vinifera]
          Length = 640

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 MISFNGSAFLNNS-LCGVVFSRNLTQSQRRLTXXXXXXXXXXSNGRSGERNVTVLMDSTL 131
           MIS N S+FL+NS   G+  SR++  SQR++            NGR+GE NV+ +M+STL
Sbjct: 1   MISLNSSSFLSNSGFSGI--SRSV--SQRKVLPPVVLALGS--NGRAGELNVSAVMESTL 54

Query: 130 KEMRDGAPVIDSDSKSIXXXXXXXXXXXDSATEDQFITPWSVS 2
           KE+RDG  V++ DSKS            D+ATEDQ +TPW+++
Sbjct: 55  KELRDGNTVLEVDSKSAVSGGVRDVQGEDAATEDQIVTPWTIT 97


>ref|XP_002283814.1| PREDICTED: NADP-dependent malic enzyme [Vitis vinifera]
           gi|297743201|emb|CBI36068.3| unnamed protein product
           [Vitis vinifera]
          Length = 640

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 MISFNGSAFLNNS-LCGVVFSRNLTQSQRRLTXXXXXXXXXXSNGRSGERNVTVLMDSTL 131
           MIS N S+FL+NS   G+  SR++  SQR++            NGR+GE NV+ +M+STL
Sbjct: 1   MISLNSSSFLSNSGFSGI--SRSV--SQRKVLPPVVLALGS--NGRAGELNVSAVMESTL 54

Query: 130 KEMRDGAPVIDSDSKSIXXXXXXXXXXXDSATEDQFITPWSVS 2
           KE+RDG  V++ DSKS            D+ATEDQ +TPW+++
Sbjct: 55  KELRDGNTVLEVDSKSAVSGGVRDVQGEDAATEDQIVTPWTIT 97


>emb|CAN69517.1| hypothetical protein VITISV_024155 [Vitis vinifera]
          Length = 657

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 MISFNGSAFLNNS-LCGVVFSRNLTQSQRRLTXXXXXXXXXXSNGRSGERNVTVLMDSTL 131
           MIS N S+FL+NS   G+  SR++  SQR++            NGR+GE NV+ +M+STL
Sbjct: 1   MISLNSSSFLSNSGFSGI--SRSV--SQRKVLPPVVLALGS--NGRAGELNVSAVMESTL 54

Query: 130 KEMRDGAPVIDSDSKSIXXXXXXXXXXXDSATEDQFITPWSVS 2
           KE+RDG  V++ DSKS            D+ATEDQ +TPW+++
Sbjct: 55  KELRDGNTVLEVDSKSAVSGGVRDVQGEDAATEDQIVTPWTIT 97


>gb|ABI98682.2| chloroplast NADP-malic enzyme precursor [Nicotiana tabacum]
          Length = 642

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 MISFNGSAFLNNSLCGVVFSRNLTQSQRR-LTXXXXXXXXXXSNGRSGERNVTVLMDSTL 131
           M S NGS+F NNSL GV  SR LTQS RR ++          SNG+ G+RNV+VL+++++
Sbjct: 1   MFSLNGSSFTNNSLSGV--SRCLTQSSRRGVSGPMVVVAAVNSNGKPGDRNVSVLVENSM 58

Query: 130 KEMRDGAPVIDSDSKSIXXXXXXXXXXXDSATEDQFITPWSVS 2
           KE    A  ++ + KS            DSATEDQ ITPW++S
Sbjct: 59  KE--SAAAPVEKEIKSTVTGGVGDVYGEDSATEDQSITPWTLS 99


>ref|NP_001234458.1| NADP-malic enzyme [Solanum lycopersicum] gi|2150027|gb|AAB58727.1|
           NADP-malic enzyme [Solanum lycopersicum]
          Length = 640

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 44/102 (43%), Positives = 59/102 (57%)
 Frame = -3

Query: 307 MISFNGSAFLNNSLCGVVFSRNLTQSQRRLTXXXXXXXXXXSNGRSGERNVTVLMDSTLK 128
           M S NG++F NNSL GV  SR L QS RR++          SNG+ G+ +V+VL+++ L 
Sbjct: 1   MFSLNGTSFTNNSLSGV--SRCLNQSSRRVSAPMVVVAAVNSNGKPGDGSVSVLVENALT 58

Query: 127 EMRDGAPVIDSDSKSIXXXXXXXXXXXDSATEDQFITPWSVS 2
           E    APV + + KS            DSATEDQ ITPW++S
Sbjct: 59  E--SPAPV-EMEVKSTVTGGVQDVYGEDSATEDQSITPWTLS 97


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