BLASTX nr result

ID: Panax21_contig00015448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015448
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_671857.2| transducin/WD-40 repeat-containing protein [Ara...    72   2e-10
dbj|BAC43304.1| unknown protein [Arabidopsis thaliana]                 72   2e-10
ref|XP_002886225.1| transducin family protein [Arabidopsis lyrat...    72   2e-10
ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi...    72   2e-10
ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-l...    71   3e-10

>ref|NP_671857.2| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
           gi|111074218|gb|ABH04482.1| At2g16405 [Arabidopsis
           thaliana] gi|330251400|gb|AEC06494.1| transducin/WD-40
           repeat-containing protein [Arabidopsis thaliana]
          Length = 482

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 35/59 (59%), Positives = 42/59 (71%)
 Frame = -2

Query: 446 KFSSVYRNLMRALNHRRKLIKF*VFTFSTGRIINKTVFDSEVTSMDHDHTGQLIFCGDG 270
           +F  V  N + A N  ++L    VF FSTGRII K +F+ EVTSMDHDHTGQ+IFCGDG
Sbjct: 264 RFHPVNNNFLSAGNANKELT---VFNFSTGRIIKKLLFEDEVTSMDHDHTGQIIFCGDG 319


>dbj|BAC43304.1| unknown protein [Arabidopsis thaliana]
          Length = 482

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 35/59 (59%), Positives = 42/59 (71%)
 Frame = -2

Query: 446 KFSSVYRNLMRALNHRRKLIKF*VFTFSTGRIINKTVFDSEVTSMDHDHTGQLIFCGDG 270
           +F  V  N + A N  ++L    VF FSTGRII K +F+ EVTSMDHDHTGQ+IFCGDG
Sbjct: 264 RFHPVNNNFLSAGNANKELT---VFNFSTGRIIKKLLFEDEVTSMDHDHTGQIIFCGDG 319


>ref|XP_002886225.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332065|gb|EFH62484.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 482

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 35/59 (59%), Positives = 42/59 (71%)
 Frame = -2

Query: 446 KFSSVYRNLMRALNHRRKLIKF*VFTFSTGRIINKTVFDSEVTSMDHDHTGQLIFCGDG 270
           +F  V  N + A N  ++L    VF FSTGRII K +F+ EVTSMDHDHTGQ+IFCGDG
Sbjct: 264 RFHPVNNNFLSAGNANKELT---VFNFSTGRIIKKLLFEDEVTSMDHDHTGQIIFCGDG 319


>ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547972|gb|EEF49464.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 500

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 34/59 (57%), Positives = 43/59 (72%)
 Frame = -2

Query: 446 KFSSVYRNLMRALNHRRKLIKF*VFTFSTGRIINKTVFDSEVTSMDHDHTGQLIFCGDG 270
           +F  V  N + A N  +++    VF FSTGRII+K  FD+++TSMDHDHTGQLIFCGDG
Sbjct: 277 RFHPVNNNFLSAGNENKEIT---VFNFSTGRIIHKAGFDAKITSMDHDHTGQLIFCGDG 332


>ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 514

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 33/58 (56%), Positives = 42/58 (72%)
 Frame = -2

Query: 446 KFSSVYRNLMRALNHRRKLIKF*VFTFSTGRIINKTVFDSEVTSMDHDHTGQLIFCGD 273
           +F  V  N +   N  +++    VF FSTGR+INK++FDSEVTSMDHDHTG L+FCGD
Sbjct: 290 RFHPVNNNFLSVGNANKEIN---VFNFSTGRVINKSIFDSEVTSMDHDHTGNLLFCGD 344


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