BLASTX nr result

ID: Panax21_contig00015438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015438
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324497.1| SecY protein [Populus trichocarpa] gi|222865...   206   1e-51
ref|XP_002886190.1| hypothetical protein ARALYDRAFT_480774 [Arab...   206   2e-51
ref|XP_004169068.1| PREDICTED: preprotein translocase subunit SC...   205   4e-51
ref|XP_004149897.1| PREDICTED: preprotein translocase subunit SC...   205   4e-51
ref|XP_002309386.1| SecY protein [Populus trichocarpa] gi|222855...   204   5e-51

>ref|XP_002324497.1| SecY protein [Populus trichocarpa] gi|222865931|gb|EEF03062.1| SecY
           protein [Populus trichocarpa]
          Length = 478

 Score =  206 bits (525), Expect = 1e-51
 Identities = 103/118 (87%), Positives = 109/118 (92%)
 Frame = +1

Query: 1   LNYASRYISKARELQKSAYLPFKENSSGVMPIIFSTSSLALPGTLARFTGLGVLKNTAVA 180
           LNYASRY S++  LQKSAYLPFK NSSGVMPIIFSTSSLALPGTLARFTG+  LK  A+A
Sbjct: 284 LNYASRYTSRSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGISALKKAALA 343

Query: 181 LNPGGSFYVPMNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIK 354
           LNPGGSFY+P NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAF+K
Sbjct: 344 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK 401


>ref|XP_002886190.1| hypothetical protein ARALYDRAFT_480774 [Arabidopsis lyrata subsp.
           lyrata] gi|297332030|gb|EFH62449.1| hypothetical protein
           ARALYDRAFT_480774 [Arabidopsis lyrata subsp. lyrata]
          Length = 549

 Score =  206 bits (523), Expect = 2e-51
 Identities = 104/118 (88%), Positives = 107/118 (90%)
 Frame = +1

Query: 1   LNYASRYISKARELQKSAYLPFKENSSGVMPIIFSTSSLALPGTLARFTGLGVLKNTAVA 180
           LNYASRY SKA  LQKSAYLPFK NS+GVMPIIFSTSSLALP TLARFTG+  LKN A A
Sbjct: 355 LNYASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNVAFA 414

Query: 181 LNPGGSFYVPMNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIK 354
           LNPGGSFY+P NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA FIK
Sbjct: 415 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTALFIK 472


>ref|XP_004169068.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
           [Cucumis sativus]
          Length = 546

 Score =  205 bits (521), Expect = 4e-51
 Identities = 102/118 (86%), Positives = 109/118 (92%)
 Frame = +1

Query: 1   LNYASRYISKARELQKSAYLPFKENSSGVMPIIFSTSSLALPGTLARFTGLGVLKNTAVA 180
           LNYASRY S+   LQKSAYLPFK NSSGVMPIIFSTS+LALPGTLARFTGL VLK  A+A
Sbjct: 352 LNYASRYTSRGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGTLARFTGLSVLKKAALA 411

Query: 181 LNPGGSFYVPMNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIK 354
           LNPGGSFY+P NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA+++K
Sbjct: 412 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASYLK 469


>ref|XP_004149897.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
           [Cucumis sativus]
          Length = 571

 Score =  205 bits (521), Expect = 4e-51
 Identities = 102/118 (86%), Positives = 109/118 (92%)
 Frame = +1

Query: 1   LNYASRYISKARELQKSAYLPFKENSSGVMPIIFSTSSLALPGTLARFTGLGVLKNTAVA 180
           LNYASRY S+   LQKSAYLPFK NSSGVMPIIFSTS+LALPGTLARFTGL VLK  A+A
Sbjct: 352 LNYASRYTSRGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGTLARFTGLSVLKKAALA 411

Query: 181 LNPGGSFYVPMNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIK 354
           LNPGGSFY+P NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA+++K
Sbjct: 412 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASYLK 469


>ref|XP_002309386.1| SecY protein [Populus trichocarpa] gi|222855362|gb|EEE92909.1| SecY
           protein [Populus trichocarpa]
          Length = 430

 Score =  204 bits (520), Expect = 5e-51
 Identities = 102/118 (86%), Positives = 107/118 (90%)
 Frame = +1

Query: 1   LNYASRYISKARELQKSAYLPFKENSSGVMPIIFSTSSLALPGTLARFTGLGVLKNTAVA 180
           LNYASRY S +  LQKSAYLPFK NSSGVMPIIFSTSSLALPGTLARFTG+  LK  A+ 
Sbjct: 238 LNYASRYTSSSSGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGISALKKAALT 297

Query: 181 LNPGGSFYVPMNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIK 354
           LNPGGSFY+P NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAF+K
Sbjct: 298 LNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK 355


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