BLASTX nr result
ID: Panax21_contig00015423
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00015423 (641 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C,... 244 1e-62 ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246... 243 3e-62 ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [... 233 2e-59 ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, ... 233 2e-59 ref|XP_002301585.1| predicted protein [Populus trichocarpa] gi|2... 224 1e-56 >ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] Length = 484 Score = 244 bits (622), Expect = 1e-62 Identities = 119/211 (56%), Positives = 141/211 (66%), Gaps = 1/211 (0%) Frame = -2 Query: 640 PKELSPSPIRSPISGYNYGLSRMNNFLTGYNQGYSPSAVGGYGVRMDGRFSPITAGRSGF 461 PKELSP P RSP+ GYNYGLSR+N+FL GY QGY+PSAVGGYG+RMDGRFSP+ GRSGF Sbjct: 184 PKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYTPSAVGGYGLRMDGRFSPVAGGRSGF 243 Query: 460 APFGSGYGMGLNFEPGMSPNYGGNANFNNTISYGRGMSPYYVGNSNRXXXXXXXXXXXXX 281 PFGSGYGMG+NFEP SP+YGGNANF++ +SYGRGMSPYY+GN+NR Sbjct: 244 PPFGSGYGMGMNFEPAFSPSYGGNANFSSNLSYGRGMSPYYIGNTNRFANPTGYDGGNGG 303 Query: 280 XXXXXXSQTRNLWGTGGLNYGANSTNSXXXXXXXXXXXXXXXXXNSALNWGSSPISP-XX 104 S TRNLWG GGLNY ++S +S NSA+NWGSS ++ Sbjct: 304 NSSFFSSVTRNLWGNGGLNYNSSSASSNTYMGSGSGSIGGNNFGNSAVNWGSSTLAAHGG 363 Query: 103 XXXXXXXXXXXGYGGADNSYNFGAGGYGRNS 11 GYGG +NS++ G GGYGRNS Sbjct: 364 GSNASNNNLNFGYGGGENSFSLGTGGYGRNS 394 >ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera] Length = 478 Score = 243 bits (619), Expect = 3e-62 Identities = 120/214 (56%), Positives = 140/214 (65%), Gaps = 1/214 (0%) Frame = -2 Query: 640 PKELSPSPIRSPISGYNYGLSRMNNFLTGYNQGYSPSAVGGYGVRMDGRFSPITAGRSGF 461 PKELSP PIRS + G+NYGLSR+N+FL+ YNQGY+PS VGGYGVRMDGRFSPI GRSGF Sbjct: 183 PKELSPGPIRSQLGGFNYGLSRVNSFLSAYNQGYAPSTVGGYGVRMDGRFSPIAGGRSGF 242 Query: 460 APFGSGYGMGLNFEPGMSPNYGGNANFNNTISYGRGMSPYYVGNSNRXXXXXXXXXXXXX 281 PFGSGYGMG+NFEPG+S +YGG+ANFNN ++YGRG++PYY+GN+NR Sbjct: 243 PPFGSGYGMGMNFEPGLSQSYGGSANFNNNLNYGRGLNPYYIGNTNRFNSTIGYDGGNGG 302 Query: 280 XXXXXXSQTRNLWGTGGLNYGANSTNSXXXXXXXXXXXXXXXXXNSALNWGSSPIS-PXX 104 S TRNLWG GGLN+G NS S NS +WGSS IS Sbjct: 303 NSSFFSSATRNLWGNGGLNFGTNSATSSAFTGSASGTTGGGAFGNSGTSWGSSLISAQGG 362 Query: 103 XXXXXXXXXXXGYGGADNSYNFGAGGYGRNSATT 2 GYGG D+SY G GGYGRNS T+ Sbjct: 363 GSNISSNSGNLGYGGGDSSYGLGVGGYGRNSGTS 396 >ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula] gi|355525053|gb|AET05507.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula] Length = 476 Score = 233 bits (594), Expect = 2e-59 Identities = 113/214 (52%), Positives = 137/214 (64%), Gaps = 1/214 (0%) Frame = -2 Query: 640 PKELSPSPIRSPISGYNYGLSRMNNFLTGYNQGYSPSAVGGYGVRMDGRFSPITAGRSGF 461 PKELSP P RSP+SGYNYGLSR+N+FL G+NQ YSPS VGGYG+R+DGRFSP+ GR+ + Sbjct: 166 PKELSPGPARSPLSGYNYGLSRVNSFLNGFNQSYSPSTVGGYGLRVDGRFSPVAGGRNAY 225 Query: 460 APFGSGYGMGLNFEPGMSPNYGGNANFNNTISYGRGMSPYYVGNSNRXXXXXXXXXXXXX 281 APFGSGYGMG+NFEPG+SP +GGNA+FN +SYGRG++PY++G SNR Sbjct: 226 APFGSGYGMGMNFEPGLSPGFGGNASFNGNLSYGRGLNPYFIGGSNRFGSPVGYESGNGG 285 Query: 280 XXXXXXSQTRNLWGTGGLNYGANSTNSXXXXXXXXXXXXXXXXXNSALNWGSSPIS-PXX 104 S TRNLWG G LNYG +S NS N+ +NW SSPIS Sbjct: 286 SNSFFSSVTRNLWGNGSLNYGTSSANSNAYIGSGSGNVGGNAFGNTGVNWSSSPISGHGG 345 Query: 103 XXXXXXXXXXXGYGGADNSYNFGAGGYGRNSATT 2 GYGG +N Y G GYGR+S +T Sbjct: 346 GNNVSQGSGNLGYGGGNNGYGLGTEGYGRSSGST 379 >ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein [Medicago truncatula] gi|355519311|gb|AET00935.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein [Medicago truncatula] Length = 479 Score = 233 bits (594), Expect = 2e-59 Identities = 113/214 (52%), Positives = 137/214 (64%), Gaps = 1/214 (0%) Frame = -2 Query: 640 PKELSPSPIRSPISGYNYGLSRMNNFLTGYNQGYSPSAVGGYGVRMDGRFSPITAGRSGF 461 PKELSP P RSP+SGYNYGLSR+N+FL G+NQ YSPS VGGYG+R+DGRFSP+ GR+ + Sbjct: 183 PKELSPGPARSPLSGYNYGLSRVNSFLNGFNQSYSPSTVGGYGLRVDGRFSPVAGGRNAY 242 Query: 460 APFGSGYGMGLNFEPGMSPNYGGNANFNNTISYGRGMSPYYVGNSNRXXXXXXXXXXXXX 281 APFGSGYGMG+NFEPG+SP +GGNA+FN +SYGRG++PY++G SNR Sbjct: 243 APFGSGYGMGMNFEPGLSPGFGGNASFNGNLSYGRGLNPYFIGGSNRFGSPVGYESGNGG 302 Query: 280 XXXXXXSQTRNLWGTGGLNYGANSTNSXXXXXXXXXXXXXXXXXNSALNWGSSPIS-PXX 104 S TRNLWG G LNYG +S NS N+ +NW SSPIS Sbjct: 303 SNSFFSSVTRNLWGNGSLNYGTSSANSNAYIGSGSGNVGGNAFGNTGVNWSSSPISGHGG 362 Query: 103 XXXXXXXXXXXGYGGADNSYNFGAGGYGRNSATT 2 GYGG +N Y G GYGR+S +T Sbjct: 363 GNNVSQGSGNLGYGGGNNGYGLGTEGYGRSSGST 396 >ref|XP_002301585.1| predicted protein [Populus trichocarpa] gi|222843311|gb|EEE80858.1| predicted protein [Populus trichocarpa] Length = 479 Score = 224 bits (570), Expect = 1e-56 Identities = 112/211 (53%), Positives = 131/211 (62%), Gaps = 1/211 (0%) Frame = -2 Query: 640 PKELSPSPIRSPISGYNYGLSRMNNFLTGYNQGYSPSAVGGYGVRMDGRFSPITAGRSGF 461 PKELSP P RSP+ GYNYGL+R+N+ L GY QGY+P AVGGYG+RMD RFS + GRSGF Sbjct: 184 PKELSPGPSRSPLGGYNYGLNRVNSLLNGYTQGYTPGAVGGYGLRMDDRFSLVAGGRSGF 243 Query: 460 APFGSGYGMGLNFEPGMSPNYGGNANFNNTISYGRGMSPYYVGNSNRXXXXXXXXXXXXX 281 PFGSGYGMGLNFEP +SP+YGG+ANFN+ +SYGRGMSPYY+GN+N Sbjct: 244 PPFGSGYGMGLNFEPALSPSYGGDANFNSNLSYGRGMSPYYIGNTNNLARPVGYDGGNGG 303 Query: 280 XXXXXXSQTRNLWGTGGLNYGANSTNSXXXXXXXXXXXXXXXXXNSALNWGSSPIS-PXX 104 S TRNLWG GGLNY NST+S NS NWGSS +S Sbjct: 304 NTSFFSSATRNLWGNGGLNYNTNSTSSNAYMGSGTGSLGGSTFGNSGANWGSSSLSGQGG 363 Query: 103 XXXXXXXXXXXGYGGADNSYNFGAGGYGRNS 11 G+G +NS+ G G Y RNS Sbjct: 364 GNNVSNSSLNFGHGSGENSFGQGMGSYARNS 394