BLASTX nr result
ID: Panax21_contig00015415
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00015415 (1649 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2... 77 1e-12 ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g... 74 9e-11 ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g... 66 3e-08 ref|XP_002321943.1| f-box family protein [Populus trichocarpa] g... 58 8e-06 >ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1| predicted protein [Populus trichocarpa] Length = 378 Score = 76.6 bits (187), Expect(2) = 1e-12 Identities = 64/187 (34%), Positives = 91/187 (48%), Gaps = 20/187 (10%) Frame = +2 Query: 242 EFFSELVNLQNLTLH-LCIMCIEACNIWCPQLVNLKIS----CKIGSTCKFVVSAPKLYS 406 + FS NL+NLT+ +C+ IE NI L +L+I +I CK ++ APKL S Sbjct: 187 KIFSSCPNLENLTIEDICLNTIENFNIHALNLKSLEILNWRYSRIMRGCKVMLFAPKLTS 246 Query: 407 FNGEGIMPII---VSSDCLEVVNIKIE------------DDISYAAMKLRTEKFEQSLLQ 541 F +G P+ V+ L+ VN+ ++ D+ Y + + T+ + L Sbjct: 247 FKFDGNTPLFWSEVNLTSLDDVNVVLQRYYYRHDYQFYVDEDEYISGEDETK--QGFCLD 304 Query: 542 LPIMFQGLHSAKILTLDSGTIKALSAVLELLVHQPSPFCNLKYVKLPKGYAHSTIPSAVR 721 L M SAK LTL I+ LS V L PSPF NLKY+KL + T+P+ V Sbjct: 305 LLKMLHQFCSAKSLTLSMNIIEVLSKVPAALNKHPSPFSNLKYLKLKTDHKDVTLPAHVL 364 Query: 722 TYLLSGS 742 Y LS S Sbjct: 365 NYFLSSS 371 Score = 23.9 bits (50), Expect(2) = 1e-12 Identities = 8/24 (33%), Positives = 14/24 (58%) Frame = +3 Query: 117 LPTSCFSLPALASLCLYNCELPKS 188 + T+C +P + C +NCE +S Sbjct: 130 IDTACRDVPIVLPRCFFNCESLRS 153 >ref|XP_002331320.1| f-box family protein [Populus trichocarpa] gi|222873903|gb|EEF11034.1| f-box family protein [Populus trichocarpa] Length = 453 Score = 74.3 bits (181), Expect = 9e-11 Identities = 64/182 (35%), Positives = 87/182 (47%), Gaps = 18/182 (9%) Frame = +2 Query: 242 EFFSELVNLQNLTLH-LCIMCIEACNIWCPQLVNLKISC----KIGSTCKFVVSAPKLYS 406 + FS NL+NLT+ +C+ IE NI L +L+I +I CK ++ APKL S Sbjct: 206 KIFSSCPNLENLTIEDICLNVIENFNIHALSLKSLEILNWRYNRIKQGCKVMLVAPKLTS 265 Query: 407 FNGEGIMPI------IVSSDCLEVVNIKIEDDISYAAMKLRTE------KFEQSL-LQLP 547 F +G P+ + S D + VV + +Y + E + EQ L L L Sbjct: 266 FKFDGNTPLFWSDVNLTSLDDVNVVLQRYHHSHNYPFYVVEDEYISEEDETEQGLGLNLI 325 Query: 548 IMFQGLHSAKILTLDSGTIKALSAVLELLVHQPSPFCNLKYVKLPKGYAHSTIPSAVRTY 727 M SAK LTL I+ LS V L PSPF NLKY+KL + T+P+ V Y Sbjct: 326 KMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKLKTDHKDVTLPAHVLNY 385 Query: 728 LL 733 L Sbjct: 386 FL 387 >ref|XP_002331319.1| f-box family protein [Populus trichocarpa] gi|222873902|gb|EEF11033.1| f-box family protein [Populus trichocarpa] Length = 453 Score = 65.9 bits (159), Expect = 3e-08 Identities = 62/182 (34%), Positives = 85/182 (46%), Gaps = 18/182 (9%) Frame = +2 Query: 242 EFFSELVNLQNLTLH-LCIMCIEACNIWCPQLVNLKISC----KIGSTCKFVVSAPKLYS 406 + FS NL+NL + + + IE NI L +L+I +I CK ++ APKL S Sbjct: 206 KIFSTCPNLENLKIEDIYLNTIENFNIHALNLKSLEILNWRYGRIMRGCKVMLFAPKLTS 265 Query: 407 FNGEGIMPI------IVSSDCLEVVNIKIEDDISYAAMKLRTE------KFEQSL-LQLP 547 F G P+ + S D + VV + + +Y + E + EQ L L L Sbjct: 266 FKFYGNTPLFWSEVNLTSLDDVNVVLQRYQHSHNYPFYVVEDEYISEEDETEQGLGLNLI 325 Query: 548 IMFQGLHSAKILTLDSGTIKALSAVLELLVHQPSPFCNLKYVKLPKGYAHSTIPSAVRTY 727 M SAK LTL I+ LS V L PSPF NLKY+KL + T+P+ V Y Sbjct: 326 KMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKLKTDHKDVTLPAHVLNY 385 Query: 728 LL 733 L Sbjct: 386 FL 387 >ref|XP_002321943.1| f-box family protein [Populus trichocarpa] gi|222868939|gb|EEF06070.1| f-box family protein [Populus trichocarpa] Length = 360 Score = 57.8 bits (138), Expect = 8e-06 Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 14/204 (6%) Frame = +2 Query: 191 LGFA-----SFNKSVRFWENRSEF---FSELVNLQNLTLHLC------IMCIEACNIWCP 328 LGFA S + S + N S+F F+ + L+NL+L C ++ I + Sbjct: 159 LGFALPNLISLSLSHCSFTNPSDFDDPFASCLKLKNLSLRSCSFLSSKVLKISGLQLLNL 218 Query: 329 QLVNLKISCKIGSTCKFVVSAPKLYSFNGEGIMPIIVSSDCLEVVNIKIEDDISYAAMKL 508 ++V L G + + APKL SF + + +V L + ++ +I+ + Sbjct: 219 EIVGLGYMNLAGLLYRIDIFAPKLISFVYK--LSHVVDFSGLHLPSL----NIARVHVCT 272 Query: 509 RTEKFEQSLLQLPIMFQGLHSAKILTLDSGTIKALSAVLELLVHQPSPFCNLKYVKLPKG 688 + +K +++ L L MF+GL +A+ + L S TI+ L + LL +PSPF LK +++ Sbjct: 273 KQDKKKEAYLGLINMFKGLGNAQSVMLHSQTIEVLGSFPGLLEQEPSPFKRLKSLQVAPN 332 Query: 689 YAHSTIPSAVRTYLLSGSPSATII 760 +P V TYLL G+P A I Sbjct: 333 -NKPFVPPHVMTYLLGGTPLAETI 355