BLASTX nr result

ID: Panax21_contig00015396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015396
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot...   194   6e-48
ref|XP_003529921.1| PREDICTED: LOW QUALITY PROTEIN: DNA replicat...   181   6e-44
gb|AFK42443.1| unknown [Medicago truncatula]                          178   4e-43
ref|XP_002311380.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
ref|XP_003531624.1| PREDICTED: DNA replication complex GINS prot...   175   3e-42

>ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis
           vinifera] gi|296083231|emb|CBI22867.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score =  194 bits (493), Expect = 6e-48
 Identities = 97/120 (80%), Positives = 109/120 (90%)
 Frame = +3

Query: 87  DDYESLISTTDAELLKRAWRNEKAAPEILGFEANLVQRSREQIQLMEETVEEFTKNGVEP 266
           DDYESLI+TTD ELLKRAWRNEKAAPEIL F+  LVQRSREQIQLMEETVEEF +NG +P
Sbjct: 14  DDYESLIATTDVELLKRAWRNEKAAPEILHFQTALVQRSREQIQLMEETVEEFGENGTDP 73

Query: 267 LSVSLYQMDLDRTLFLLRSYLRTRLQKIENYVFHIQKTSELWNKLSKQEQKFAKRCTEDM 446
           L+VSLYQMDLDRT FLLRSYLR RLQKIE Y+FHI KT ++W++LS+QEQKFAKRCT+DM
Sbjct: 74  LTVSLYQMDLDRTQFLLRSYLRIRLQKIEKYMFHILKT-DVWSRLSEQEQKFAKRCTDDM 132


>ref|XP_003529921.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication complex GINS
           protein SLD5-like [Glycine max]
          Length = 226

 Score =  181 bits (459), Expect = 6e-44
 Identities = 88/120 (73%), Positives = 102/120 (85%)
 Frame = +3

Query: 87  DDYESLISTTDAELLKRAWRNEKAAPEILGFEANLVQRSREQIQLMEETVEEFTKNGVEP 266
           DDYE+LI+TTDAELLKRAWRNEKAAPEIL +E++LV R ++ IQ +EETVEE +  G  P
Sbjct: 14  DDYEALIATTDAELLKRAWRNEKAAPEILRYESDLVSRVKKVIQFLEETVEEKSSGGTNP 73

Query: 267 LSVSLYQMDLDRTLFLLRSYLRTRLQKIENYVFHIQKTSELWNKLSKQEQKFAKRCTEDM 446
           LSVSLYQMDLDRTLFLLRSYLR R+QKIE +VFHIQKT ELWN+LSK E+ FAK C  D+
Sbjct: 74  LSVSLYQMDLDRTLFLLRSYLRIRIQKIEKFVFHIQKTEELWNRLSKDEKDFAKACENDL 133


>gb|AFK42443.1| unknown [Medicago truncatula]
          Length = 227

 Score =  178 bits (452), Expect = 4e-43
 Identities = 86/120 (71%), Positives = 103/120 (85%)
 Frame = +3

Query: 87  DDYESLISTTDAELLKRAWRNEKAAPEILGFEANLVQRSREQIQLMEETVEEFTKNGVEP 266
           DDY++LISTTD ELLKRAWRNEKAAPEIL FE++L+ R + QI+LMEETVEE    G +P
Sbjct: 15  DDYDALISTTDVELLKRAWRNEKAAPEILRFESDLINRVKGQIELMEETVEEKLSVGSDP 74

Query: 267 LSVSLYQMDLDRTLFLLRSYLRTRLQKIENYVFHIQKTSELWNKLSKQEQKFAKRCTEDM 446
           LSVSLYQMDLDRTLFLLRSYLR R+ KIE Y+FHI+KT ELWN+LS+ E+ F +RCT+D+
Sbjct: 75  LSVSLYQMDLDRTLFLLRSYLRIRILKIEKYMFHIRKTQELWNRLSRDEKLFTERCTDDL 134


>ref|XP_002311380.1| predicted protein [Populus trichocarpa] gi|222851200|gb|EEE88747.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  177 bits (450), Expect = 6e-43
 Identities = 87/121 (71%), Positives = 103/121 (85%)
 Frame = +3

Query: 84  MDDYESLISTTDAELLKRAWRNEKAAPEILGFEANLVQRSREQIQLMEETVEEFTKNGVE 263
           MDDYE+LISTTD ELLKRAWRNEKAAPEIL FE++LVQR +EQI+L E+ VE    N ++
Sbjct: 10  MDDYETLISTTDVELLKRAWRNEKAAPEILQFESSLVQRIKEQIELAEQNVEISEANNID 69

Query: 264 PLSVSLYQMDLDRTLFLLRSYLRTRLQKIENYVFHIQKTSELWNKLSKQEQKFAKRCTED 443
           PL+VSLYQMDLDRT FLLRSYLR RLQKIE Y+F++ KT E  N+LSKQEQ FA+RCT+D
Sbjct: 70  PLTVSLYQMDLDRTQFLLRSYLRVRLQKIEKYLFYVLKTDEYLNRLSKQEQMFARRCTDD 129

Query: 444 M 446
           +
Sbjct: 130 L 130


>ref|XP_003531624.1| PREDICTED: DNA replication complex GINS protein SLD5-like [Glycine
           max]
          Length = 226

 Score =  175 bits (444), Expect = 3e-42
 Identities = 88/120 (73%), Positives = 99/120 (82%)
 Frame = +3

Query: 87  DDYESLISTTDAELLKRAWRNEKAAPEILGFEANLVQRSREQIQLMEETVEEFTKNGVEP 266
           DDYE+LI+TTD ELLKRAWRNEKAAPEIL +E+ LV R  + IQLMEE VEE +  G +P
Sbjct: 14  DDYETLIATTDVELLKRAWRNEKAAPEILRYESKLVSRVNKVIQLMEEIVEEKSSGGTDP 73

Query: 267 LSVSLYQMDLDRTLFLLRSYLRTRLQKIENYVFHIQKTSELWNKLSKQEQKFAKRCTEDM 446
           LSVSLYQMDLDRTLFLLRSYLR R+QKIE YVFHIQKT EL N+LSK E+ FAK C  D+
Sbjct: 74  LSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYVFHIQKTEELRNRLSKYEKDFAKMCENDL 133


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