BLASTX nr result

ID: Panax21_contig00015394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015394
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot...   317   4e-84
ref|XP_002274677.2| PREDICTED: DNA replication complex GINS prot...   286   6e-75
gb|AFK42443.1| unknown [Medicago truncatula]                          283   4e-74
ref|XP_003564787.1| PREDICTED: DNA replication complex GINS prot...   272   8e-71
ref|XP_003529921.1| PREDICTED: LOW QUALITY PROTEIN: DNA replicat...   271   2e-70

>ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis
           vinifera] gi|296083231|emb|CBI22867.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score =  317 bits (811), Expect = 4e-84
 Identities = 164/224 (73%), Positives = 192/224 (85%)
 Frame = -3

Query: 837 MASGTGDGSGFSGMDDYESLISTTDAELLKRAWQNEKAAPEILGFEADLVQRSREQIQLM 658
           MASG+ +GSGF   DDYESLI+TTD ELLKRAW+NEKAAPEIL F+  LVQRSREQIQLM
Sbjct: 1   MASGSEEGSGFPA-DDYESLIATTDVELLKRAWRNEKAAPEILHFQTALVQRSREQIQLM 59

Query: 657 EETVEEFTKNGVEPLSVSLYQMDLDRTLFLLRSYLRTRLQKIENYVFHIQKTSELWNKLS 478
           EETVEEF +NG +PL+VSLYQMDLDRT FLLRSYLR RLQKIE Y+FHI KT ++W++LS
Sbjct: 60  EETVEEFGENGTDPLTVSLYQMDLDRTQFLLRSYLRIRLQKIEKYMFHILKT-DVWSRLS 118

Query: 477 KQEQKFAKRCTEDMEQHFEQSVLSKLPDRYKSHLKQSVISEEDDMVPEAQLERFVICRCK 298
           +QEQKFAKRCT+DME+H EQSVLS+LPD Y+S LKQSV SEEDDMVPE +L+ FV C+ K
Sbjct: 119 EQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFCKSK 178

Query: 297 RFLGAFQLDENGVEKPVDLEADDLYALRYKSIKPLVESGQIDLV 166
             + AFQLD++  ++ VDL ADDLY LRY S+KPL+ESGQIDLV
Sbjct: 179 GSIEAFQLDDS--KEVVDLVADDLYILRYNSVKPLIESGQIDLV 220


>ref|XP_002274677.2| PREDICTED: DNA replication complex GINS protein SLD5-like [Vitis
           vinifera]
          Length = 214

 Score =  286 bits (732), Expect = 6e-75
 Identities = 153/224 (68%), Positives = 182/224 (81%)
 Frame = -3

Query: 837 MASGTGDGSGFSGMDDYESLISTTDAELLKRAWQNEKAAPEILGFEADLVQRSREQIQLM 658
           M SG+ + SGF   DDYESLI+TTD ELLKRAW NEKAAPEIL F+      +REQIQLM
Sbjct: 1   MVSGSEEESGFPA-DDYESLIATTDVELLKRAWMNEKAAPEILHFQ------TREQIQLM 53

Query: 657 EETVEEFTKNGVEPLSVSLYQMDLDRTLFLLRSYLRTRLQKIENYVFHIQKTSELWNKLS 478
           EETVEEF +NG +PL+VSLYQM+LDRT FLLRSYL+ RLQKIE Y+FHI KT ++W+ LS
Sbjct: 54  EETVEEFGENGTDPLTVSLYQMNLDRTQFLLRSYLQIRLQKIEKYMFHILKT-DVWSWLS 112

Query: 477 KQEQKFAKRCTEDMEQHFEQSVLSKLPDRYKSHLKQSVISEEDDMVPEAQLERFVICRCK 298
           +QEQKFAKRCT+DME+H EQSVLS+LPD Y+S LKQSV SEEDDMVPE +L+ FV  + K
Sbjct: 113 EQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFYKSK 172

Query: 297 RFLGAFQLDENGVEKPVDLEADDLYALRYKSIKPLVESGQIDLV 166
             + AFQLD++  ++ VDL ADDLY LRY S+ PL+ESGQIDLV
Sbjct: 173 GSIEAFQLDDS--KEVVDLVADDLYILRYNSVNPLIESGQIDLV 214


>gb|AFK42443.1| unknown [Medicago truncatula]
          Length = 227

 Score =  283 bits (725), Expect = 4e-74
 Identities = 143/227 (62%), Positives = 180/227 (79%), Gaps = 3/227 (1%)
 Frame = -3

Query: 837 MASGTGDGSGFSGMDDYESLISTTDAELLKRAWQNEKAAPEILGFEADLVQRSREQIQLM 658
           M S + +G   S  DDY++LISTTD ELLKRAW+NEKAAPEIL FE+DL+ R + QI+LM
Sbjct: 1   MGSRSAEGEQSSLADDYDALISTTDVELLKRAWRNEKAAPEILRFESDLINRVKGQIELM 60

Query: 657 EETVEEFTKNGVEPLSVSLYQMDLDRTLFLLRSYLRTRLQKIENYVFHIQKTSELWNKLS 478
           EETVEE    G +PLSVSLYQMDLDRTLFLLRSYLR R+ KIE Y+FHI+KT ELWN+LS
Sbjct: 61  EETVEEKLSVGSDPLSVSLYQMDLDRTLFLLRSYLRIRILKIEKYMFHIRKTQELWNRLS 120

Query: 477 KQEQKFAKRCTEDMEQHFEQSVLSKLPDRYKSHLKQSVISEEDDMVPEAQLERFVICRCK 298
           + E+ F +RCT+D+++H E SVLSKLP+ Y+S+ +QSVISEEDDMVPE +L+ FV+CR K
Sbjct: 121 RDEKLFTERCTDDLKEHLESSVLSKLPENYQSYERQSVISEEDDMVPEPRLDTFVLCRSK 180

Query: 297 RFLGAFQLDENGVE---KPVDLEADDLYALRYKSIKPLVESGQIDLV 166
            +L   QL++  V+   K  ++E D LY + YKSIKPLVESG+IDL+
Sbjct: 181 EYLTGIQLEDGPVDDRSKLFEMEPDVLYFICYKSIKPLVESGKIDLL 227


>ref|XP_003564787.1| PREDICTED: DNA replication complex GINS protein SLD5-like
           [Brachypodium distachyon]
          Length = 215

 Score =  272 bits (696), Expect = 8e-71
 Identities = 142/210 (67%), Positives = 169/210 (80%)
 Frame = -3

Query: 795 DDYESLISTTDAELLKRAWQNEKAAPEILGFEADLVQRSREQIQLMEETVEEFTKNGVEP 616
           +D  S  +TTD ELLKRAW+NEKAAPEIL F++ LV R+REQIQL+EET+E+FT NGV+ 
Sbjct: 7   EDTASAAATTDVELLKRAWRNEKAAPEILRFDSPLVSRAREQIQLLEETLEDFTDNGVDD 66

Query: 615 LSVSLYQMDLDRTLFLLRSYLRTRLQKIENYVFHIQKTSELWNKLSKQEQKFAKRCTEDM 436
           L VSLYQMDLDR LFLLRSYLR RLQKIE Y+ HI K+ +L ++LS QEQ+FAK CTE M
Sbjct: 67  LVVSLYQMDLDRALFLLRSYLRLRLQKIEKYMIHISKSDDLMSRLSLQEQRFAKSCTEIM 126

Query: 435 EQHFEQSVLSKLPDRYKSHLKQSVISEEDDMVPEAQLERFVICRCKRFLGAFQLDENGVE 256
           E+H EQSVLSKLP  Y S  +QS+ S EDDMVPE QL+ FV C+ K  +GAFQLD+ G E
Sbjct: 127 EKHLEQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDTFVFCKTKSDVGAFQLDDIG-E 185

Query: 255 KPVDLEADDLYALRYKSIKPLVESGQIDLV 166
           + VDL ADDLY LRYKSIK LVE+G+IDL+
Sbjct: 186 EIVDLVADDLYVLRYKSIKGLVENGRIDLI 215


>ref|XP_003529921.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication complex GINS
           protein SLD5-like [Glycine max]
          Length = 226

 Score =  271 bits (692), Expect = 2e-70
 Identities = 142/227 (62%), Positives = 174/227 (76%), Gaps = 3/227 (1%)
 Frame = -3

Query: 837 MASGTGDGSGFSGMDDYESLISTTDAELLKRAWQNEKAAPEILGFEADLVQRSREQIQLM 658
           MAS +    G S  DDYE+LI+TTDAELLKRAW+NEKAAPEIL +E+DLV R ++ IQ +
Sbjct: 1   MASNSA-AEGVSMGDDYEALIATTDAELLKRAWRNEKAAPEILRYESDLVSRVKKVIQFL 59

Query: 657 EETVEEFTKNGVEPLSVSLYQMDLDRTLFLLRSYLRTRLQKIENYVFHIQKTSELWNKLS 478
           EETVEE +  G  PLSVSLYQMDLDRTLFLLRSYLR R+QKIE +VFHIQKT ELWN+LS
Sbjct: 60  EETVEEKSSGGTNPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKFVFHIQKTEELWNRLS 119

Query: 477 KQEQKFAKRCTEDMEQHFEQSVLSKLPDRYKSHLKQSVISEEDDMVPEAQLERFVICRCK 298
           K E+ FAK C  D++QH ++SVL KLP  YKS L+QS +SEEDDMVPE QL+ FV+CR K
Sbjct: 120 KDEKDFAKACENDLKQHLDESVLLKLPKDYKSVLRQSSMSEEDDMVPEPQLDTFVLCRSK 179

Query: 297 RFLGAFQLDENGVE---KPVDLEADDLYALRYKSIKPLVESGQIDLV 166
            +L   QL++  V+   K  ++E   L+ + YKSI  LVESG+IDL+
Sbjct: 180 EYLTGIQLEDGPVDDRSKLFEMEPGVLHFICYKSIXALVESGKIDLL 226


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