BLASTX nr result

ID: Panax21_contig00015391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015391
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]   261   1e-67
ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin...   260   1e-67
ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|2...   254   1e-65
ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2...   246   3e-63
ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containin...   236   3e-60

>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
          Length = 518

 Score =  261 bits (666), Expect = 1e-67
 Identities = 132/216 (61%), Positives = 147/216 (68%), Gaps = 1/216 (0%)
 Frame = -3

Query: 646 VQS-SVPSSQQYGVVTGDWPFARSALLPGSYMPGTYGSXXXXXXXXXXXGWNPYQAALTS 470
           VQS SVPSSQQYG+V      AR  LLP SY+ G Y             GW+ Y A ++ 
Sbjct: 235 VQSPSVPSSQQYGLVV-----ARPPLLPSSYIHGPYSPVLIPPGMVPFPGWSHYPAPVSP 289

Query: 469 VAPPSAQSSVGAGPICGLTQLSSSAPAYAGPYLSMPSPAGPSGISQKEHIFPERPGQPEC 290
           VA PS Q +VG+G + GLT LS SAPAY GPY  +PS  GPS  SQKE IFPERPGQPEC
Sbjct: 290 VASPSTQPTVGSGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPERPGQPEC 349

Query: 289 QYYMKTGDCKFRSSCKYHHPSQWSGPKTNFVLSTMGLPLRPGESLCSHYALTGVCKFGAS 110
           QYYM+TGDCKF SSCKYHHP +W  PKTN VLS MGLPLRPG   C+HYA  G+CKFG +
Sbjct: 350 QYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYAQRGICKFGPT 409

Query: 109 CKFDHPMETLXXXXXXXXXSDMAVVPYPVGSSMPTL 2
           CKFDHPM TL         +DM V PYPVGSSM TL
Sbjct: 410 CKFDHPMGTLSYSPSASSLADMPVAPYPVGSSMGTL 445



 Score =  113 bits (282), Expect = 3e-23
 Identities = 48/76 (63%), Positives = 55/76 (72%)
 Frame = -3

Query: 319 FPERPGQPECQYYMKTGDCKFRSSCKYHHPSQWSGPKTNFVLSTMGLPLRPGESLCSHYA 140
           FPER GQP CQ+YMKTG CKF +SCKYHHP Q  G  +   L+  G PLRPGE  CS+Y 
Sbjct: 132 FPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYV 191

Query: 139 LTGVCKFGASCKFDHP 92
            TG+CKFG +CKF HP
Sbjct: 192 KTGLCKFGETCKFHHP 207


>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
           vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score =  260 bits (665), Expect = 1e-67
 Identities = 132/216 (61%), Positives = 146/216 (67%), Gaps = 1/216 (0%)
 Frame = -3

Query: 646 VQS-SVPSSQQYGVVTGDWPFARSALLPGSYMPGTYGSXXXXXXXXXXXGWNPYQAALTS 470
           VQS SVPSSQQYG+V      AR  LLP SY  G Y             GW+ Y A ++ 
Sbjct: 195 VQSPSVPSSQQYGLVV-----ARPPLLPSSYFHGPYSPVLIPPGMVPFPGWSHYPAPVSP 249

Query: 469 VAPPSAQSSVGAGPICGLTQLSSSAPAYAGPYLSMPSPAGPSGISQKEHIFPERPGQPEC 290
           VA PS Q +VG+G + GLT LS SAPAY GPY  +PS  GPS  SQKE IFPERPGQPEC
Sbjct: 250 VASPSTQPTVGSGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPERPGQPEC 309

Query: 289 QYYMKTGDCKFRSSCKYHHPSQWSGPKTNFVLSTMGLPLRPGESLCSHYALTGVCKFGAS 110
           QYYM+TGDCKF SSCKYHHP +W  PKTN VLS MGLPLRPG   C+HYA  G+CKFG +
Sbjct: 310 QYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYAQRGICKFGPT 369

Query: 109 CKFDHPMETLXXXXXXXXXSDMAVVPYPVGSSMPTL 2
           CKFDHPM TL         +DM V PYPVGSSM TL
Sbjct: 370 CKFDHPMGTLSYSPSASSLADMPVAPYPVGSSMGTL 405



 Score =  113 bits (282), Expect = 3e-23
 Identities = 48/76 (63%), Positives = 55/76 (72%)
 Frame = -3

Query: 319 FPERPGQPECQYYMKTGDCKFRSSCKYHHPSQWSGPKTNFVLSTMGLPLRPGESLCSHYA 140
           FPER GQP CQ+YMKTG CKF +SCKYHHP Q  G  +   L+  G PLRPGE  CS+Y 
Sbjct: 92  FPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYV 151

Query: 139 LTGVCKFGASCKFDHP 92
            TG+CKFG +CKF HP
Sbjct: 152 KTGLCKFGETCKFHHP 167


>ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|222863502|gb|EEF00633.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score =  254 bits (649), Expect = 1e-65
 Identities = 124/212 (58%), Positives = 144/212 (67%)
 Frame = -3

Query: 637 SVPSSQQYGVVTGDWPFARSALLPGSYMPGTYGSXXXXXXXXXXXGWNPYQAALTSVAPP 458
           SVPSSQQYGV+      AR  LLPGSY+ G YG             W+PY A ++ VA P
Sbjct: 197 SVPSSQQYGVMV-----ARPPLLPGSYVQGPYGPVLLSPSLVPYPSWSPYPAPVSPVASP 251

Query: 457 SAQSSVGAGPICGLTQLSSSAPAYAGPYLSMPSPAGPSGISQKEHIFPERPGQPECQYYM 278
           +AQ +VG+G + G++ LS SAPAY G Y S+P+  GPS  SQKEH+FPERPGQPECQYYM
Sbjct: 252 NAQPAVGSGSVYGISPLSPSAPAYTGAYQSIPTAKGPSSSSQKEHVFPERPGQPECQYYM 311

Query: 277 KTGDCKFRSSCKYHHPSQWSGPKTNFVLSTMGLPLRPGESLCSHYALTGVCKFGASCKFD 98
           KTGDCKF SSC+YHHP +    KTN VLS MGLPLRPG   C+HY   G CKFG +CKFD
Sbjct: 312 KTGDCKFESSCRYHHPPELVTSKTNVVLSPMGLPLRPGAPTCTHYTQHGQCKFGPACKFD 371

Query: 97  HPMETLXXXXXXXXXSDMAVVPYPVGSSMPTL 2
           HPM TL         +DM V PYPVGSS+ TL
Sbjct: 372 HPMGTLSYSPSASSLADMPVAPYPVGSSIGTL 403



 Score =  105 bits (262), Expect = 7e-21
 Identities = 46/76 (60%), Positives = 53/76 (69%)
 Frame = -3

Query: 319 FPERPGQPECQYYMKTGDCKFRSSCKYHHPSQWSGPKTNFVLSTMGLPLRPGESLCSHYA 140
           FPER GQP CQYYM+TG CKF +SCKY+HP Q         L+  G PLRPGE  C++Y 
Sbjct: 90  FPERVGQPLCQYYMRTGTCKFGASCKYNHPKQGGSSVRPVSLNYYGYPLRPGERECTYYI 149

Query: 139 LTGVCKFGASCKFDHP 92
            TG CKFGA+CKF HP
Sbjct: 150 KTGQCKFGATCKFHHP 165



 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 34/85 (40%), Positives = 50/85 (58%)
 Frame = -3

Query: 340 ISQKEHIFPERPGQPECQYYMKTGDCKFRSSCKYHHPSQWSGPKTNFVLSTMGLPLRPGE 161
           I + E  +PERP + +C YY++TG C + + C+Y+HP   +             P R G+
Sbjct: 37  IGETESEYPERPNEQDCMYYLRTGFCGYGARCRYNHPRDRTAVLGAARAGGGEFPERVGQ 96

Query: 160 SLCSHYALTGVCKFGASCKFDHPME 86
            LC +Y  TG CKFGASCK++HP +
Sbjct: 97  PLCQYYMRTGTCKFGASCKYNHPKQ 121



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = -3

Query: 430 PICGLTQLSSSAPAYAGPYLSMPSPAGPS--GISQKEHIFPERPGQPECQYYMKTGDCKF 257
           P+C     + +    A    + P   G S   +S   + +P RPG+ EC YY+KTG CKF
Sbjct: 97  PLCQYYMRTGTCKFGASCKYNHPKQGGSSVRPVSLNYYGYPLRPGERECTYYIKTGQCKF 156

Query: 256 RSSCKYHHP 230
            ++CK+HHP
Sbjct: 157 GATCKFHHP 165


>ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score =  246 bits (628), Expect = 3e-63
 Identities = 123/216 (56%), Positives = 145/216 (67%), Gaps = 1/216 (0%)
 Frame = -3

Query: 646 VQS-SVPSSQQYGVVTGDWPFARSALLPGSYMPGTYGSXXXXXXXXXXXGWNPYQAALTS 470
           VQS SVPSSQQYGV+      AR  LLPGSY+ G YG             WNPY A ++ 
Sbjct: 193 VQSPSVPSSQQYGVMV-----ARPPLLPGSYVQGPYGPVLLSPSVVPYPSWNPYPAPVSP 247

Query: 469 VAPPSAQSSVGAGPICGLTQLSSSAPAYAGPYLSMPSPAGPSGISQKEHIFPERPGQPEC 290
           VA P+ Q +VG+G + G++ LS SAPAY G + S+P   GPS  +QKEH+FPERPGQPEC
Sbjct: 248 VASPNTQPAVGSGSVYGMSALSPSAPAYTGAFQSIPPATGPSSSTQKEHLFPERPGQPEC 307

Query: 289 QYYMKTGDCKFRSSCKYHHPSQWSGPKTNFVLSTMGLPLRPGESLCSHYALTGVCKFGAS 110
           QYY+KTGDCKFRSSC+YHHP +    K+N VLS +GLPLRPG   CSHY   G CKFG +
Sbjct: 308 QYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCSHYTQRGQCKFGPA 367

Query: 109 CKFDHPMETLXXXXXXXXXSDMAVVPYPVGSSMPTL 2
           CKFDHPM TL         +DM V PY VGSS+ TL
Sbjct: 368 CKFDHPMGTLSYSPSASSLADMPVAPYLVGSSIGTL 403



 Score =  111 bits (278), Expect = 1e-22
 Identities = 51/98 (52%), Positives = 60/98 (61%)
 Frame = -3

Query: 319 FPERPGQPECQYYMKTGDCKFRSSCKYHHPSQWSGPKTNFVLSTMGLPLRPGESLCSHYA 140
           +PER GQP CQYYM+TG CKF +SCKYHHP Q  G  +   L+  G PLRPGE  C++Y 
Sbjct: 90  YPERAGQPLCQYYMRTGTCKFGASCKYHHPKQGGGSASPVSLNYYGYPLRPGERECTYYI 149

Query: 139 LTGVCKFGASCKFDHPMETLXXXXXXXXXSDMAVVPYP 26
            TG CKFGA+CKF HP               +A VP P
Sbjct: 150 KTGQCKFGATCKFHHPQPGNIQIPAQSLAPQIAPVPGP 187



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = -3

Query: 430 PICGLTQLSSSAPAYAGPYLSMPSPAGPSG--ISQKEHIFPERPGQPECQYYMKTGDCKF 257
           P+C     + +    A      P   G S   +S   + +P RPG+ EC YY+KTG CKF
Sbjct: 97  PLCQYYMRTGTCKFGASCKYHHPKQGGGSASPVSLNYYGYPLRPGERECTYYIKTGQCKF 156

Query: 256 RSSCKYHHP 230
            ++CK+HHP
Sbjct: 157 GATCKFHHP 165


>ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1
           [Vitis vinifera] gi|296086618|emb|CBI32253.3| unnamed
           protein product [Vitis vinifera]
          Length = 475

 Score =  236 bits (602), Expect = 3e-60
 Identities = 115/216 (53%), Positives = 141/216 (65%), Gaps = 1/216 (0%)
 Frame = -3

Query: 646 VQS-SVPSSQQYGVVTGDWPFARSALLPGSYMPGTYGSXXXXXXXXXXXGWNPYQAALTS 470
           VQS SVP+  QYG  +  W   R  +LPGSY+ G YG            GW+PY   ++ 
Sbjct: 183 VQSPSVPTPTQYGGTSTSWRVPRPPVLPGSYVQGPYGPVLFPPGVVPIPGWSPYSTPVSP 242

Query: 469 VAPPSAQSSVGAGPICGLTQLSSSAPAYAGPYLSMPSPAGPSGISQKEHIFPERPGQPEC 290
           V  P AQ +VGAG + G+TQL S+    AGPY S+PS AGPS  +QKE +FPERPGQ EC
Sbjct: 243 VLSPGAQPTVGAGSVYGVTQLPSTH-TLAGPYASLPSSAGPSSSNQKEQVFPERPGQQEC 301

Query: 289 QYYMKTGDCKFRSSCKYHHPSQWSGPKTNFVLSTMGLPLRPGESLCSHYALTGVCKFGAS 110
           QYY++TGDCKF SSC+YHHP +W  PKTN VLS +GLPLRPG   C+ Y   G CKFG++
Sbjct: 302 QYYLRTGDCKFGSSCRYHHPREWVVPKTNCVLSPLGLPLRPGVQPCTFYLQNGYCKFGST 361

Query: 109 CKFDHPMETLXXXXXXXXXSDMAVVPYPVGSSMPTL 2
           CKFDHP+  +         +DM V PYPVGSS+ TL
Sbjct: 362 CKFDHPLGNMRYSPSASSLTDMPVAPYPVGSSLATL 397



 Score =  100 bits (249), Expect = 2e-19
 Identities = 41/76 (53%), Positives = 53/76 (69%)
 Frame = -3

Query: 319 FPERPGQPECQYYMKTGDCKFRSSCKYHHPSQWSGPKTNFVLSTMGLPLRPGESLCSHYA 140
           +PER G+P CQ+Y+KTG CKF +SC++HHP    G  ++  L+  G PLR GE  CS+Y 
Sbjct: 90  YPERIGEPACQFYLKTGTCKFGASCRFHHPRNGGGSMSHVSLNIYGYPLRLGEKECSYYL 149

Query: 139 LTGVCKFGASCKFDHP 92
            TG CKFG +CKF HP
Sbjct: 150 KTGQCKFGITCKFHHP 165



 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
 Frame = -3

Query: 343 GISQKEHIFPERPGQPECQYYMKTGDCKFRSSCKYHHPSQWSGPKTNFVLSTMG--LPLR 170
           G+S +E  +PERPG  +C YYMKTG C F S C+Y+HP   S   T   L + G   P R
Sbjct: 38  GLSSRES-YPERPGVADCVYYMKTGFCGFGSRCRYNHPRDRSSVST---LRSGGGEYPER 93

Query: 169 PGESLCSHYALTGVCKFGASCKFDHP 92
            GE  C  Y  TG CKFGASC+F HP
Sbjct: 94  IGEPACQFYLKTGTCKFGASCRFHHP 119


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