BLASTX nr result

ID: Panax21_contig00015384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015384
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514123.1| DNA repair protein reca, putative [Ricinus c...    75   4e-12
ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002330492.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3...    70   2e-10
ref|XP_003541289.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...    69   4e-10

>ref|XP_002514123.1| DNA repair protein reca, putative [Ricinus communis]
           gi|223546579|gb|EEF48077.1| DNA repair protein reca,
           putative [Ricinus communis]
          Length = 380

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/82 (43%), Positives = 56/82 (68%)
 Frame = -1

Query: 412 FITKAGSYFYMNDNNFRGKDALKRHLAENTSVKDDLLMKLREKLTDAEPEKEMETKSADE 233
           F+ KAGS++  N  NF GK+A ++ LAEN + +++L+MKLREKL +A  +K   ++  DE
Sbjct: 299 FLGKAGSFYNYNGQNFHGKEAFRKFLAENDNAREELVMKLREKLLNAHIDKGQGSEVTDE 358

Query: 232 GPNVEIISPETSDEDVMIAAEA 167
               E ISP+++DE+ + A EA
Sbjct: 359 ALVEETISPDSTDEEAVTAVEA 380


>ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|222854260|gb|EEE91807.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/81 (46%), Positives = 55/81 (67%)
 Frame = -1

Query: 409 ITKAGSYFYMNDNNFRGKDALKRHLAENTSVKDDLLMKLREKLTDAEPEKEMETKSADEG 230
           I K+GS++  N   + GK+A K  LA N  V+++L+MKLREKL + E  +E+  +S D  
Sbjct: 339 IKKSGSFYDCNGKKYHGKEAFKEFLAHNDDVQEELMMKLREKLLEGETGQELGDESTDGE 398

Query: 229 PNVEIISPETSDEDVMIAAEA 167
           P  EIISP+++DE+V  AAEA
Sbjct: 399 PTQEIISPDSTDEEV-AAAEA 418


>ref|XP_002330492.1| predicted protein [Populus trichocarpa] gi|222872426|gb|EEF09557.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/75 (41%), Positives = 52/75 (69%)
 Frame = -1

Query: 412 FITKAGSYFYMNDNNFRGKDALKRHLAENTSVKDDLLMKLREKLTDAEPEKEMETKSADE 233
           FI K G+++  N   + GK+AL+  LA N  V+++L+MKLREKL +AE ++E++ ++ D 
Sbjct: 283 FIKKNGAFYDCNGRKYHGKEALREFLAHNDDVQEELMMKLREKLLEAETDQELKDETTDG 342

Query: 232 GPNVEIISPETSDED 188
            P  E I P+++DE+
Sbjct: 343 EPTQESIPPDSTDEE 357


>ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
           [Glycine max]
          Length = 459

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/75 (48%), Positives = 53/75 (70%)
 Frame = -1

Query: 409 ITKAGSYFYMNDNNFRGKDALKRHLAENTSVKDDLLMKLREKLTDAEPEKEMETKSADEG 230
           I+KAG+ FY N+++FRGKDALK  LAEN S  ++L MKLREKL +AE EK  E+   +  
Sbjct: 365 ISKAGAMFYYNEHSFRGKDALKNFLAENRSALEELEMKLREKLLNAETEKMQESDVINGY 424

Query: 229 PNVEIISPETSDEDV 185
              EI + ++++++V
Sbjct: 425 VTEEIATVDSTNDNV 439


>ref|XP_003541289.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein recA homolog 3,
           mitochondrial-like [Glycine max]
          Length = 442

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/81 (46%), Positives = 52/81 (64%)
 Frame = -1

Query: 409 ITKAGSYFYMNDNNFRGKDALKRHLAENTSVKDDLLMKLREKLTDAEPEKEMETKSADEG 230
           I+KAG+ FY N+ +FRGKDALK  LAEN S  ++L MKLREKL +AE EK  +  + D  
Sbjct: 364 ISKAGAMFYYNEQSFRGKDALKNFLAENQSALEELEMKLREKLLNAETEKMWDVINGD-- 421

Query: 229 PNVEIISPETSDEDVMIAAEA 167
               I + +++DE+     EA
Sbjct: 422 VREAIATVDSTDEEAAAIVEA 442


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