BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015362
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40152.3| unnamed protein product [Vitis vinifera]              528   e-147
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   528   e-147
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope...   481   e-133
ref|XP_002303926.1| predicted protein [Populus trichocarpa] gi|2...   471   e-130
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   466   e-129

>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  528 bits (1359), Expect = e-147
 Identities = 253/362 (69%), Positives = 305/362 (84%), Gaps = 3/362 (0%)
 Frame = +1

Query: 1    HVHLNEVLIRDSHKSMDEAFEKCQDTLRSFWKKKKVGHLFKRIELSVSQCCSFRQSCESK 180
            H+HLN++L++D + SM E  +KC++T+ SF KKK VG  FK+I LS  +CC+F+ SC+SK
Sbjct: 1002 HIHLNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFFKKIILSFRECCTFQHSCQSK 1061

Query: 181  GRDMPCLKFFWKETSDNHLERTSHIFADTICPVLLETIIKGDPRVCSADIIWISPDTTTW 360
            G DMPCL FFW+   D++LE+  HI A  ICPVLL+TIIKGD RVC+ +IIWISPDTTTW
Sbjct: 1062 GSDMPCLLFFWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTW 1121

Query: 361  IRNPSKSQKGELALDVVLEKKAVKQSGDAWRIVIDSCLPVIHLIDTSRSIPYSIKQVQEL 540
            IRNP KS+KGELALD+VLEK AVKQ GDAWRIV+D+CLPV+HLIDT RSIPY+IKQVQEL
Sbjct: 1122 IRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQEL 1181

Query: 541  LGISCAFEQAIQRLSSSVTMVAKGVLKEHLILLANSMTCSGNLVGFNKAGIKALSRSLNV 720
            LGISCAF+QA+QRLS SVTMVAKGVLKEHLILLANSMTC+GNL+GFN  G KALSR+LN+
Sbjct: 1182 LGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNL 1241

Query: 721  QVPFTEATLFTPKKCFETAAEKCHVDSLSSIVASCSWGKHVAVGTGSSFDILWDTRQVEL 900
            QVPFTEATLFTP+KCFE A+EKCH DSLSSIVASCSWGKHV VGTGS FD+LWDT+++  
Sbjct: 1242 QVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGP 1301

Query: 901  NQHNGTDVYDFLNLVRSSS-GVERNSGCLGAEIDDLDMYYESDEVALSPEHAS--DKPVF 1071
             Q  G D+Y FL+LVRS S G E ++ CLGAE++DL +  E+ E+ +SPEH+S  +KPVF
Sbjct: 1302 AQDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVF 1361

Query: 1072 ED 1077
            ED
Sbjct: 1362 ED 1363


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  528 bits (1359), Expect = e-147
 Identities = 253/362 (69%), Positives = 305/362 (84%), Gaps = 3/362 (0%)
 Frame = +1

Query: 1    HVHLNEVLIRDSHKSMDEAFEKCQDTLRSFWKKKKVGHLFKRIELSVSQCCSFRQSCESK 180
            H+HLN++L++D + SM E  +KC++T+ SF KKK VG  FK+I LS  +CC+F+ SC+SK
Sbjct: 942  HIHLNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFFKKIILSFRECCTFQHSCQSK 1001

Query: 181  GRDMPCLKFFWKETSDNHLERTSHIFADTICPVLLETIIKGDPRVCSADIIWISPDTTTW 360
            G DMPCL FFW+   D++LE+  HI A  ICPVLL+TIIKGD RVC+ +IIWISPDTTTW
Sbjct: 1002 GSDMPCLLFFWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTW 1061

Query: 361  IRNPSKSQKGELALDVVLEKKAVKQSGDAWRIVIDSCLPVIHLIDTSRSIPYSIKQVQEL 540
            IRNP KS+KGELALD+VLEK AVKQ GDAWRIV+D+CLPV+HLIDT RSIPY+IKQVQEL
Sbjct: 1062 IRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQEL 1121

Query: 541  LGISCAFEQAIQRLSSSVTMVAKGVLKEHLILLANSMTCSGNLVGFNKAGIKALSRSLNV 720
            LGISCAF+QA+QRLS SVTMVAKGVLKEHLILLANSMTC+GNL+GFN  G KALSR+LN+
Sbjct: 1122 LGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNL 1181

Query: 721  QVPFTEATLFTPKKCFETAAEKCHVDSLSSIVASCSWGKHVAVGTGSSFDILWDTRQVEL 900
            QVPFTEATLFTP+KCFE A+EKCH DSLSSIVASCSWGKHV VGTGS FD+LWDT+++  
Sbjct: 1182 QVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGP 1241

Query: 901  NQHNGTDVYDFLNLVRSSS-GVERNSGCLGAEIDDLDMYYESDEVALSPEHAS--DKPVF 1071
             Q  G D+Y FL+LVRS S G E ++ CLGAE++DL +  E+ E+ +SPEH+S  +KPVF
Sbjct: 1242 AQDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVF 1301

Query: 1072 ED 1077
            ED
Sbjct: 1302 ED 1303


>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1127

 Score =  481 bits (1239), Expect = e-133
 Identities = 245/365 (67%), Positives = 294/365 (80%), Gaps = 6/365 (1%)
 Frame = +1

Query: 1    HVHLNEVLIRDSHKSMDEAFEKCQDTLRSFWKKKKVGHLFKRIELSVSQCCSFRQSCESK 180
            H+ LN+  + +   S+ E  E+CQ+ + SF  KKK+G+LFKRI LSVS+ CSF  +  SK
Sbjct: 493  HIRLNQGQLENLGISVLEVHERCQENISSFRXKKKIGNLFKRIVLSVSEFCSFCHNSGSK 552

Query: 181  GRDMPCLKFFWKETSDNHLERTSHIFADTICPVLLETIIKGDPRVCSADIIWISPDTTTW 360
              + PCL+F W + SD+HLER SHI AD I P+LL+T+IKGDPRV SA+I WISPDT +W
Sbjct: 553  CLNAPCLRFSWPDASDDHLERVSHILADMIXPILLDTVIKGDPRVSSANIAWISPDTMSW 612

Query: 361  IRNPSKSQKGELALDVVLEKKAVKQSGDAWRIVIDSCLPVIHLIDTSRSIPYSIKQVQEL 540
            IR+PSKSQ+GELALD+VLEK+AVK  GDAWR ++DSCLPVIHLIDT+RSIPY+IKQVQEL
Sbjct: 613  IRSPSKSQRGELALDIVLEKEAVKXRGDAWRXLMDSCLPVIHLIDTTRSIPYAIKQVQEL 672

Query: 541  LGISCAFEQAIQRLSSSVTMVAKGVLKEHLILLANSMTCSGNLVGFNKAGIKALSRSLNV 720
            +GISCAFEQA+ RLS+SVTMV KGVLK+HL+LLANSMTC+GNLVGFN  GIKALSRSLNV
Sbjct: 673  IGISCAFEQAVXRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNV 732

Query: 721  QVPFTEATLFTPKKCFETAAEKCHVDSLSSIVASCSWGKHVAVGTGSSFDILWDTRQVEL 900
            Q+PFTEATLFTP+KCFE AAEKCHVDSLSSIVASCSWGKHVAVGTGS F++L +TR VE 
Sbjct: 733  QIPFTEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEW 792

Query: 901  NQHNGTDVYDFLNLVRSSSGVE-RNSGCLGAEIDDLDMYYESDE---VALSP--EHASDK 1062
            N  +  DVY FL+LVR++S  E   + CLGAEID+L    E DE   + LSP  +  S+ 
Sbjct: 793  NIPDTRDVYSFLHLVRNTSAQEVEGTSCLGAEIDEL----EEDEDMGLYLSPNRDSGSEM 848

Query: 1063 PVFED 1077
            P FED
Sbjct: 849  PTFED 853


>ref|XP_002303926.1| predicted protein [Populus trichocarpa] gi|222841358|gb|EEE78905.1|
            predicted protein [Populus trichocarpa]
          Length = 1020

 Score =  471 bits (1212), Expect = e-130
 Identities = 240/390 (61%), Positives = 293/390 (75%), Gaps = 31/390 (7%)
 Frame = +1

Query: 1    HVHLNEVLIRDSHKSMDEAFEKCQDTLRSFWKKKKVGHLFKRIELSVSQCCSFRQSCESK 180
            HVHL++  ++D + +     EKCQ+T+ +F KKKKVG+LFK+  L VS+ CSF+Q  +  
Sbjct: 19   HVHLDKRKLQDLNITAQVILEKCQETVNTFRKKKKVGNLFKKTILLVSESCSFQQCID-- 76

Query: 181  GRDMPCLKFFWKETSDNHLERTSHIFADTICPVLLETIIK-------------------- 300
              + PCL FFW+   D HLERTS+I AD ICPVLLETIIK                    
Sbjct: 77   --ESPCLMFFWQGADDVHLERTSNILADMICPVLLETIIKVYIGLTISIRHSVQRGSKRT 134

Query: 301  --------GDPRVCSADIIWISPDTTTWIRNPSKSQKGELALDVVLEKKAVKQSGDAWRI 456
                    GD R+  A+IIW +P+T TWIRNPS++QKGELALD+VLEK  VK+SGDAWRI
Sbjct: 135  WCSSINACGDHRISCANIIWATPETNTWIRNPSRTQKGELALDIVLEKSVVKKSGDAWRI 194

Query: 457  VIDSCLPVIHLIDTSRSIPYSIKQVQELLGISCAFEQAIQRLSSSVTMVAKGVLKEHLIL 636
            V+DSCLPV+HLI+T+RSIPY+IKQVQELLG+SCAF+ A+QRLS SVTMVAKGVLKEHLIL
Sbjct: 195  VLDSCLPVLHLINTTRSIPYAIKQVQELLGVSCAFDTAVQRLSKSVTMVAKGVLKEHLIL 254

Query: 637  LANSMTCSGNLVGFNKAGIKALSRSLNVQVPFTEATLFTPKKCFETAAEKCHVDSLSSIV 816
            L NSMTC+G+L+GF   G K LSRSL++QVPFTEATLFTP+KCFE AAEKCH DSLSSIV
Sbjct: 255  LGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPFTEATLFTPRKCFEKAAEKCHTDSLSSIV 314

Query: 817  ASCSWGKHVAVGTGSSFDILWDTRQVELNQHNGTDVYDFLNLVRSSSGVERN-SGCLGAE 993
            ASC+WGKHV VGTGS FD+LWDT++  LN     DVY FLN+VRS++G E + + CLGAE
Sbjct: 315  ASCAWGKHVTVGTGSHFDVLWDTKEACLNPEGSMDVYSFLNMVRSTAGGEESVTACLGAE 374

Query: 994  IDDLDMYYESDEVALSPEH--ASDKPVFED 1077
            +DDL +  E ++  LSPEH  +SDKP FED
Sbjct: 375  VDDLML--EDEDWNLSPEHNSSSDKPTFED 402


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  466 bits (1199), Expect = e-129
 Identities = 231/361 (63%), Positives = 282/361 (78%), Gaps = 2/361 (0%)
 Frame = +1

Query: 1    HVHLNEVLIRDSHKSMDEAFEKCQDTLRSFWKKKKVGHLFKRIELSVSQCCSFRQSCESK 180
            HVHLN +L+++ +  M E   +CQ+T+ SF KKKK   +   +  S+S+ C+F Q    +
Sbjct: 940  HVHLNRMLLKELNIDMTEVLRRCQETMSSFKKKKK--KIAHALRFSISEHCAFHQWNGEE 997

Query: 181  GRDMPCLKFFWKETSDNHLERTSHIFADTICPVLLETIIKGDPRVCSADIIWISPDTTTW 360
              DMPCL  FW +T D HLERT+HI AD + P+L ETIIKGDPR+ SA +IWISPD+T+W
Sbjct: 998  SIDMPCL-IFWHQTRDVHLERTAHILADIVFPLLSETIIKGDPRIKSASVIWISPDSTSW 1056

Query: 361  IRNPSKSQKGELALDVVLEKKAVKQSGDAWRIVIDSCLPVIHLIDTSRSIPYSIKQVQEL 540
             +NPS+ Q GELALDV LEK AVKQ+GDAWR V+D CLPV+HLIDT RS+PY+IKQVQEL
Sbjct: 1057 QKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQEL 1116

Query: 541  LGISCAFEQAIQRLSSSVTMVAKGVLKEHLILLANSMTCSGNLVGFNKAGIKALSRSLNV 720
            LGISCAF+Q IQRLS SV+MV+KGVL +HLILLANSMTC+GN++GFN  G KALSR+LN+
Sbjct: 1117 LGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNI 1176

Query: 721  QVPFTEATLFTPKKCFETAAEKCHVDSLSSIVASCSWGKHVAVGTGSSFDILWDTRQVEL 900
            QVPFTEATLFTP+KCFE AAEKCH DSLSSIVASCSWGKHVAVGTGS FDILWD +++  
Sbjct: 1177 QVPFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGC 1236

Query: 901  NQHNGTDVYDFLNLVRSSSGVERNSGCLGAEIDDLDMYYESDEVALSPE--HASDKPVFE 1074
             Q +  DVY+FL++VRS    E  S CLG EI+D+ +  E  E+ LSPE    S+KPVFE
Sbjct: 1237 KQDDVVDVYNFLHMVRSGKSEEPTSACLGEEIEDIMVEDEYGELTLSPEPFSTSEKPVFE 1296

Query: 1075 D 1077
            D
Sbjct: 1297 D 1297