BLASTX nr result
ID: Panax21_contig00015359
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00015359
(1206 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containi... 462 e-128
ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|2... 414 e-113
ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containi... 405 e-111
ref|XP_002518071.1| pentatricopeptide repeat-containing protein,... 402 e-110
ref|NP_171976.1| pentatricopeptide repeat-containing protein [Ar... 350 4e-94
>ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
[Vitis vinifera]
Length = 677
Score = 462 bits (1190), Expect = e-128
Identities = 233/357 (65%), Positives = 272/357 (76%)
Frame = -3
Query: 1072 SHGIITPTETQLVSLIHASKNXXXXXXXXXXXIRHSHSSNSWVVTQLISSCSLHKSINYA 893
+HG ET + LIHAS H+ SNS VVTQLISS KS++YA
Sbjct: 32 AHGPSRSPETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYA 91
Query: 892 LSIFSHFHNPNLFVFNALIRALADNSCFESSISHFVYMLRLNIRPDRLTYPFVLKSSAGL 713
LSIF F +PNLFVFNALIR LA+NS FE S+SHFV MLRL+IRPDRLT PFVLKS A L
Sbjct: 92 LSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAAL 151
Query: 712 IEGGVGMMVHGEILKRGLEFDSFVRVSLVDMYVKVELLGFALQLFDESPERNKLGSVLLW 533
++ G+G +HG ++K GLEFDSFVRVSLVDMYVK+ LGF LQLFDESP+RNK S+LLW
Sbjct: 152 VDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLW 211
Query: 532 NVLINGCCKVVDLGKAVEIFEAMPERNVMSWNCLINGFMRNGEVDRAAEFFDRMPERNVV 353
NVLINGCCKV DL KA +FEAMPERN SWN LINGF+RNG++DRA E F +MPE+NVV
Sbjct: 212 NVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVV 271
Query: 352 SWTTIVTGFSHNGYFKKALSMFCRMLVEGVRPNELTFVPALSACAKAGAIDTGVRIHCYA 173
SWTT++ GFS NG +KALSMF RML EGVRPN+LT V AL AC K GA+ G RIH Y
Sbjct: 272 SWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYL 331
Query: 172 WSSGFQLDRAVGTALIDMYAKCGFIETASRVFSMTKDKDIRTWTAIIWGWAIHGCVE 2
S+GFQL+R +GTAL+DMYAKCG I++ASRVF TK KD+ TW+ +IWGWAIHGC +
Sbjct: 332 SSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFD 388
Score = 73.2 bits (178), Expect = 1e-10
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 46/257 (17%)
Frame = -3
Query: 634 SLVDMYVKVELLGFALQLFDESPERNKLGSVLLWNVLINGCCKVVDLGKAVEIFEAMPER 455
SL++ +V+ L A +LF + PE+N V+ W +ING + D KA+ +F M E
Sbjct: 244 SLINGFVRNGDLDRARELFVQMPEKN----VVSWTTMINGFSQNGDHEKALSMFWRMLEE 299
Query: 454 NVMSWNCLI-------------------------NGFMRN--------------GEVDRA 392
V + + NGF N G + A
Sbjct: 300 GVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSA 359
Query: 391 AEFFDRMPERNVVSWTTIVTGFSHNGYFKKALSMFCRMLVEGVRPNELTFVPALSACAKA 212
+ F +++++W+ ++ G++ +G F +AL F +M G+ P+E+ F+ L+AC+ +
Sbjct: 360 SRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHS 419
Query: 211 GAIDTGVRIHCYAWSSGFQLDRAVG------TALIDMYAKCGFIETA-SRVFSMTKDKDI 53
G +D G+ + +LD ++ T ++D+ + G ++ A S + SM + D
Sbjct: 420 GNVDQGLN-----FFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDF 474
Query: 52 RTWTAIIWGWAIHGCVE 2
W A+ H +E
Sbjct: 475 VIWGALFCACRAHKNIE 491
>ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|222847424|gb|EEE84971.1|
predicted protein [Populus trichocarpa]
Length = 719
Score = 414 bits (1065), Expect = e-113
Identities = 212/350 (60%), Positives = 256/350 (73%), Gaps = 1/350 (0%)
Frame = -3
Query: 1057 TPTETQLVSLIHASKNXXXXXXXXXXXIRHSHSSNSWVVTQLISSCSLHKSINYALSIFS 878
TPTE +SLIH SK I H+ SS+S + TQLISS SL KSIN++L++F+
Sbjct: 78 TPTEAHFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFN 137
Query: 877 HFHNPNLFVFNALIRALADNSCFESSISHFVYMLRLNIRPDRLTYPFVLKSSAGLIEGGV 698
H NLF FNALIR L NS F ++I HF MLR I+PDRLTYPFVLKS AGL +
Sbjct: 138 HHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTEL 197
Query: 697 GMMVHGEILKRGLEFDSFVRVSLVDMYVKVELLGFALQLFDESPERNKLGS-VLLWNVLI 521
GM +H IL+ G+E DSFVRVSLVDMYVKVE LG A ++FDESPER GS LLWNVLI
Sbjct: 198 GMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLI 257
Query: 520 NGCCKVVDLGKAVEIFEAMPERNVMSWNCLINGFMRNGEVDRAAEFFDRMPERNVVSWTT 341
GCCK + KAV++F+AMP++ +SW+ LI+GF +NG++DRA E FD+MPE+NVVSWTT
Sbjct: 258 KGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTT 317
Query: 340 IVTGFSHNGYFKKALSMFCRMLVEGVRPNELTFVPALSACAKAGAIDTGVRIHCYAWSSG 161
+V GFS NG +KALSMF +ML EGVRPN T V ALSACAK G ++ G+RIH Y +G
Sbjct: 318 MVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNG 377
Query: 160 FQLDRAVGTALIDMYAKCGFIETASRVFSMTKDKDIRTWTAIIWGWAIHG 11
L A+GTAL+DMYAKCG IE+AS VF T+ K IRTWT +IWGWAIHG
Sbjct: 378 LHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHG 427
Score = 72.4 bits (176), Expect = 2e-10
Identities = 38/142 (26%), Positives = 72/142 (50%)
Frame = -3
Query: 433 LINGFMRNGEVDRAAEFFDRMPERNVVSWTTIVTGFSHNGYFKKALSMFCRMLVEGVRPN 254
LI+ ++ + F+ +N+ ++ ++ G + N +F A+ F ML G++P+
Sbjct: 119 LISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPD 178
Query: 253 ELTFVPALSACAKAGAIDTGVRIHCYAWSSGFQLDRAVGTALIDMYAKCGFIETASRVFS 74
LT+ L + A + + G+ IHC G +LD V +L+DMY K + +A +VF
Sbjct: 179 RLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFD 238
Query: 73 MTKDKDIRTWTAIIWGWAIHGC 8
+ ++ +A++W I GC
Sbjct: 239 ESPERFDSGSSALLWNVLIKGC 260
>ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
[Cucumis sativus] gi|449505311|ref|XP_004162432.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 405 bits (1042), Expect = e-111
Identities = 214/370 (57%), Positives = 263/370 (71%)
Frame = -3
Query: 1120 AFFALTSSKKAAPPHSSHGIITPTETQLVSLIHASKNXXXXXXXXXXXIRHSHSSNSWVV 941
AFF+ S + P I+ ET + LIHAS + R + S+S VV
Sbjct: 25 AFFSSMFSSSSPP-------ISFLETHFIDLIHASNSTHKLRQIHGQLYRCNVFSSSRVV 77
Query: 940 TQLISSCSLHKSINYALSIFSHFHNPNLFVFNALIRALADNSCFESSISHFVYMLRLNIR 761
TQ ISSCS S++YA+SIF F N ++FNALIR LA+NS FESSIS FV ML+ I
Sbjct: 78 TQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKIS 137
Query: 760 PDRLTYPFVLKSSAGLIEGGVGMMVHGEILKRGLEFDSFVRVSLVDMYVKVELLGFALQL 581
PDRLT+PFVLKS+A L GGVG +H ILK GLEFDSFVRVSLVDMYVKVE LG AL++
Sbjct: 138 PDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKV 197
Query: 580 FDESPERNKLGSVLLWNVLINGCCKVVDLGKAVEIFEAMPERNVMSWNCLINGFMRNGEV 401
FDESPE K GSVL+WNVLI+G C++ DL KA E+F++MP+++ SWN LINGFM+ G++
Sbjct: 198 FDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDM 257
Query: 400 DRAAEFFDRMPERNVVSWTTIVTGFSHNGYFKKALSMFCRMLVEGVRPNELTFVPALSAC 221
RA E F +MPE+NVVSWTT+V GFS NG +KAL F ML EG RPN+ T V ALSAC
Sbjct: 258 GRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSAC 317
Query: 220 AKAGAIDTGVRIHCYAWSSGFQLDRAVGTALIDMYAKCGFIETASRVFSMTKDKDIRTWT 41
AK GA+D G+RIH Y +GF+L+ +GTAL+DMYAKCG IE A +VF TK+K + W+
Sbjct: 318 AKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWS 377
Query: 40 AIIWGWAIHG 11
+IWGWAIHG
Sbjct: 378 VMIWGWAIHG 387
>ref|XP_002518071.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542667|gb|EEF44204.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 404
Score = 402 bits (1033), Expect = e-110
Identities = 206/368 (55%), Positives = 265/368 (72%)
Frame = -3
Query: 1105 TSSKKAAPPHSSHGIITPTETQLVSLIHASKNXXXXXXXXXXXIRHSHSSNSWVVTQLIS 926
TSSK + +S ET ++ LIH+SK + H+ SS+S + QLIS
Sbjct: 18 TSSKSTSLTKASSQ--NQIETHIIPLIHSSKTALQLHQIHTQILLHNLSSSSHITAQLIS 75
Query: 925 SCSLHKSINYALSIFSHFHNPNLFVFNALIRALADNSCFESSISHFVYMLRLNIRPDRLT 746
S SL KSI Y+LSIF+ +H NL++FNALIR L DN + SI HF+ +LR +I+PD LT
Sbjct: 76 SSSLRKSIAYSLSIFNSYHPKNLYLFNALIRGLTDNYRYLDSIDHFILLLRSDIKPDHLT 135
Query: 745 YPFVLKSSAGLIEGGVGMMVHGEILKRGLEFDSFVRVSLVDMYVKVELLGFALQLFDESP 566
+ FVLKS A L G+ +HG IL+ GLEFDSFVR+S+VD+YVK+E + AL++FDESP
Sbjct: 136 FSFVLKSIASLSLKGLARALHGMILRCGLEFDSFVRISMVDVYVKLEEVKLALKVFDESP 195
Query: 565 ERNKLGSVLLWNVLINGCCKVVDLGKAVEIFEAMPERNVMSWNCLINGFMRNGEVDRAAE 386
+R GS LLWNVLINGCCKV D+ KA+E+FE MP RN SWN LINGF + G++++A E
Sbjct: 196 QRFHEGSTLLWNVLINGCCKVGDMRKALELFEDMPLRNTASWNSLINGFFKIGDLEQAIE 255
Query: 385 FFDRMPERNVVSWTTIVTGFSHNGYFKKALSMFCRMLVEGVRPNELTFVPALSACAKAGA 206
FDRMP ++VVSWTT+V GFS NG +KALS+F RML E V+PN+ T V ALSACAK GA
Sbjct: 256 HFDRMPVKDVVSWTTMVNGFSQNGDHEKALSVFSRMLDEDVKPNDFTIVSALSACAKIGA 315
Query: 205 IDTGVRIHCYAWSSGFQLDRAVGTALIDMYAKCGFIETASRVFSMTKDKDIRTWTAIIWG 26
++ G+RIH Y +GF+L+RAVG AL+DM+AKCG I +AS+VF K+KDI TW+ +IWG
Sbjct: 316 LEAGLRIHKYLKDNGFRLNRAVGNALVDMHAKCGNINSASQVFKEAKEKDIITWSVMIWG 375
Query: 25 WAIHGCVE 2
WAIHG E
Sbjct: 376 WAIHGHFE 383
>ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g04840 gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17
[Arabidopsis thaliana] gi|332189629|gb|AEE27750.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 665
Score = 350 bits (898), Expect = 4e-94
Identities = 176/349 (50%), Positives = 241/349 (69%)
Frame = -3
Query: 1057 TPTETQLVSLIHASKNXXXXXXXXXXXIRHSHSSNSWVVTQLISSCSLHKSINYALSIFS 878
+P E+ +SLIHA K+ +R S S V QL+S SL KS +Y+LSIF
Sbjct: 26 SPDESHFISLIHACKDTASLRHVHAQILRRGVLS-SRVAAQLVSCSSLLKSPDYSLSIFR 84
Query: 877 HFHNPNLFVFNALIRALADNSCFESSISHFVYMLRLNIRPDRLTYPFVLKSSAGLIEGGV 698
+ N FV NALIR L +N+ FESS+ HF+ MLRL ++PDRLT+PFVLKS++ L +
Sbjct: 85 NSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWL 144
Query: 697 GMMVHGEILKRGLEFDSFVRVSLVDMYVKVELLGFALQLFDESPERNKLGSVLLWNVLIN 518
G +H LK ++ DSFVR+SLVDMY K L A Q+F+ESP+R K S+L+WNVLIN
Sbjct: 145 GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLIN 204
Query: 517 GCCKVVDLGKAVEIFEAMPERNVMSWNCLINGFMRNGEVDRAAEFFDRMPERNVVSWTTI 338
G C+ D+ A +F +MPERN SW+ LI G++ +GE++RA + F+ MPE+NVVSWTT+
Sbjct: 205 GYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTL 264
Query: 337 VTGFSHNGYFKKALSMFCRMLVEGVRPNELTFVPALSACAKAGAIDTGVRIHCYAWSSGF 158
+ GFS G ++ A+S + ML +G++PNE T LSAC+K+GA+ +G+RIH Y +G
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGI 324
Query: 157 QLDRAVGTALIDMYAKCGFIETASRVFSMTKDKDIRTWTAIIWGWAIHG 11
+LDRA+GTAL+DMYAKCG ++ A+ VFS KDI +WTA+I GWA+HG
Sbjct: 325 KLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHG 373
Score = 80.5 bits (197), Expect = 8e-13
Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 46/246 (18%)
Frame = -3
Query: 634 SLVDMYVKVELLGFALQLFDESPERNKLGSVLLWNVLINGCCKVVDLGKAVEIFEAMPER 455
+L+ YV L A QLF+ PE+N V+ W LING + D A+ + M E+
Sbjct: 232 TLIKGYVDSGELNRAKQLFELMPEKN----VVSWTTLINGFSQTGDYETAISTYFEMLEK 287
Query: 454 NVMS---------------------------------------WNCLINGFMRNGEVDRA 392
+ L++ + + GE+D A
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 391 AEFFDRMPERNVVSWTTIVTGFSHNGYFKKALSMFCRMLVEGVRPNELTFVPALSACAKA 212
A F M ++++SWT ++ G++ +G F +A+ F +M+ G +P+E+ F+ L+AC +
Sbjct: 348 ATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNS 407
Query: 211 GAIDTGVRIHCYAWSSGFQLDRAVGTAL------IDMYAKCGFIETASR-VFSMTKDKDI 53
+D G+ + +LD A+ L +D+ + G + A V +M + D+
Sbjct: 408 SEVDLGLN-----FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDL 462
Query: 52 RTWTAI 35
TW A+
Sbjct: 463 TTWAAL 468