BLASTX nr result

ID: Panax21_contig00015338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00015338
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246...   145   3e-33
ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795...   138   4e-31
ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799...   135   5e-30
ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, ...   134   8e-30
ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [...   132   2e-29

>ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
          Length = 478

 Score =  145 bits (367), Expect = 3e-33
 Identities = 79/157 (50%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
 Frame = -1

Query: 529 NYGTNSTNSSXXXXXXXXXXXXXXXXXXXXXNWVSSPISPQGGG-NVSIQVGNLGYGGAD 353
           N+GTNS  SS                      W SS IS QGGG N+S   GNLGYGG D
Sbjct: 321 NFGTNSATSSAFTGSASGTTGGGAFGNSGTS-WGSSLISAQGGGSNISSNSGNLGYGGGD 379

Query: 352 NSYNLGAGGYGRNSATTGAPTSSYSASNGRYDAVFADLYGSGSVYGDNNWRSANSEQEES 173
           +SY LG GGYGRNS T+ APTSSY+ASN  YD   A+ Y  GSVYGD+ WR +N+E++ S
Sbjct: 380 SSYGLGVGGYGRNSGTSVAPTSSYAASNSGYDGALAEFYSGGSVYGDSTWRPSNAERDGS 439

Query: 172 SAFGYGLGNGANDVQXXXXXXXXXXXXXXKRQTNRGI 62
            +FGYGLGN A+DV               KRQ+NRGI
Sbjct: 440 GSFGYGLGNAASDVPAKSSPGYVGGYSVTKRQSNRGI 476


>ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
          Length = 479

 Score =  138 bits (348), Expect = 4e-31
 Identities = 78/158 (49%), Positives = 89/158 (56%), Gaps = 2/158 (1%)
 Frame = -1

Query: 529 NYGTNSTNSSXXXXXXXXXXXXXXXXXXXXXNWVSSPISPQ--GGGNVSIQVGNLGYGGA 356
           +YGT+S NS+                      W SS IS Q  GG N+S   GNLGYGG 
Sbjct: 321 SYGTSSANSNAYIGSGSGSAGGNTFGNTGVN-WSSSAISGQQGGGNNMSQSSGNLGYGGG 379

Query: 355 DNSYNLGAGGYGRNSATTGAPTSSYSASNGRYDAVFADLYGSGSVYGDNNWRSANSEQEE 176
           DN+Y LG GGYGR+S    APTSSYSASNG  D  FAD Y + SVYGD  WRS+NSE++ 
Sbjct: 380 DNNYGLGTGGYGRSSGAIFAPTSSYSASNGGVDGAFADFYNNSSVYGDPTWRSSNSERDG 439

Query: 175 SSAFGYGLGNGANDVQXXXXXXXXXXXXXXKRQTNRGI 62
           S  FGYGLG  A+DV               KRQ NRGI
Sbjct: 440 SGPFGYGLGGAASDVSAKSSPGYVGGYTVNKRQPNRGI 477


>ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
          Length = 475

 Score =  135 bits (339), Expect = 5e-30
 Identities = 71/126 (56%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
 Frame = -1

Query: 433 WVSSPISPQ--GGGNVSIQVGNLGYGGADNSYNLGAGGYGRNSATTGAPTSSYSASNGRY 260
           W SS IS Q  GG N+S   GNLGYGG DNSY LG GGYGR++    APTSSYSASNG  
Sbjct: 348 WGSSAISGQQGGGNNMSQSSGNLGYGGGDNSYGLGTGGYGRSTGAAFAPTSSYSASNGGV 407

Query: 259 DAVFADLYGSGSVYGDNNWRSANSEQEESSAFGYGLGNGANDVQXXXXXXXXXXXXXXKR 80
           D  FAD Y + SVYGD  WRS+NSE++ S  FGYG G  A+DV               KR
Sbjct: 408 DGAFADFYNNSSVYGDPTWRSSNSERDGSGPFGYGFGGVASDVSAKSSPGYVGGYTVNKR 467

Query: 79  QTNRGI 62
           Q NRGI
Sbjct: 468 QPNRGI 473


>ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
           [Medicago truncatula] gi|355519311|gb|AET00935.1|
           Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like
           protein [Medicago truncatula]
          Length = 479

 Score =  134 bits (337), Expect = 8e-30
 Identities = 78/158 (49%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
 Frame = -1

Query: 529 NYGTNSTNSSXXXXXXXXXXXXXXXXXXXXXNWVSSPISPQGGGN-VSIQVGNLGYGGAD 353
           NYGT+S NS+                      W SSPIS  GGGN VS   GNLGYGG +
Sbjct: 321 NYGTSSANSNAYIGSGSGNVGGNAFGNTGVN-WSSSPISGHGGGNNVSQGSGNLGYGGGN 379

Query: 352 NSYNLGAGGYGRNSATTGAPTSSYSASNGR-YDAVFADLYGSGSVYGDNNWRSANSEQEE 176
           N Y LG  GYGR+S +T APTSSYS SNG   D  FAD Y + SVYGD  WRS+NSE++ 
Sbjct: 380 NGYGLGTEGYGRSSGSTLAPTSSYSTSNGGGVDGAFADFYNNNSVYGDTTWRSSNSERDG 439

Query: 175 SSAFGYGLGNGANDVQXXXXXXXXXXXXXXKRQTNRGI 62
           S  FGYGLG   +DV               KRQ NRGI
Sbjct: 440 SGPFGYGLGGAPSDVSAKTSPGYVGGYTVNKRQPNRGI 477


>ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
           gi|355525053|gb|AET05507.1| Heterogeneous nuclear
           ribonucleoprotein A1 [Medicago truncatula]
          Length = 476

 Score =  132 bits (333), Expect = 2e-29
 Identities = 77/157 (49%), Positives = 87/157 (55%), Gaps = 2/157 (1%)
 Frame = -1

Query: 529 NYGTNSTNSSXXXXXXXXXXXXXXXXXXXXXNWVSSPISPQGGGN-VSIQVGNLGYGGAD 353
           NYGT+S NS+                      W SSPIS  GGGN VS   GNLGYGG +
Sbjct: 304 NYGTSSANSNAYIGSGSGNVGGNAFGNTGVN-WSSSPISGHGGGNNVSQGSGNLGYGGGN 362

Query: 352 NSYNLGAGGYGRNSATTGAPTSSYSASN-GRYDAVFADLYGSGSVYGDNNWRSANSEQEE 176
           N Y LG  GYGR+S +T APTSSYS SN G  D  FAD Y + SVYGD  WRS+NSE++ 
Sbjct: 363 NGYGLGTEGYGRSSGSTLAPTSSYSTSNGGGVDGAFADFYNNNSVYGDTTWRSSNSERDG 422

Query: 175 SSAFGYGLGNGANDVQXXXXXXXXXXXXXXKRQTNRG 65
           S  FGYGLG   +DV               KRQ NRG
Sbjct: 423 SGPFGYGLGGAPSDVSAKTSPGYVGGYTVNKRQPNRG 459


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